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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:515373..519001- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17744.2.p1 ID=MSTRG.17744.2.p1|Name=MSTRG.17744.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3629bp|location=Sequence derived from alignment at sc0000182_pilon:515373..519001- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCTTTAGGTGAATAAAAAACAATTCAAATTAAATCAAATTGAAAAGAA
AAATCTACAAAACAAAATGGCTGAGGTTGAAAATGAGAAAATGGACAGTT
GTCCCTTTTGCCTCTGTAGGAAAAAGGTAATCAGTAGCGGTCTACTTGAA
TTTCACTAGTGGTGCCCTCTCTTTCTTTTTGTTTTGTTTTACTTCCTCGG
TTATTTGTAATTATTACCATGTTATAGGCTAAGGTGATTTGATATCTTCC
TTTTAATAACCTATTTTTCATGATATCTGATGTACACGTTTTTTCATAAG
AACAAACTATATATGAACATAATGTTTCAATTGGCCAAAATGTTTTAAGA
ACATTTTAAGGATTTTGCAGACTCTAAAACACCCAATTTCATAGGAAAAT
GAACAAAAATGCTCAAAAAATGGTGAAAATAAGAACGTGCTAAGAACAAT
TTTTAGGTATAAAACTCGAAAAGTTAAGAACATCCGAAGGGTTAAAAATT
TTTGGATGTTTTTACAAAAAAAAAAGCGGTCTACTTGAATTTCACTAGAG
GTAACTCCCGTTTTTTGTGTTTTACCACATTGGTTATTGGTATTAATTAC
CGTGGTATAGGCTAGGGTGATTTGAGATCTTCATTTAATGACCTAATTTT
CATGGTATCTGATATACAGCATACCTAGTGTTGCGTGTATTTCTTCTTTT
TTATCATAGGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAGCTGTAG
GTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAGGTCGTA
AAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCA
GTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAA
TTTGACTGGGAAATTGAAAATACTCAAACCGTGTGTAAAATTATTTTTAC
TCTAAGAAACTTTCTGATACATTAAATTTTAGAAGATTCCAACTAGCACA
TAACGTTCTTTCAACGTTCGTCTAACGTTAAATGGACGTTGTGAACACAA
GATAAACGTTGAAAGAACTTTGTGAGATTCATATTATCTCATGATATTAT
GATTTCATCCGTATGTTTGTGATTTAATTTTCAGAACTAACAAAGAAGTG
TCAGACTTTGAAGAAAATGAATTGCAACTTACTCCTATAAAACCGTGAGT
GTTAATAGGCGTTAGGCCATCTTTTTATAAAGAGTCGTTAGAGTGTAATC
CACTCCCACCCGAGTATTAGCAATGGGCTTTTCAAGAAAAAATTGAATAT
GGGGGTGGAAGATGTAATATTTTTGGAAATTTACCACCCGGACATTGTGA
CTTTTGACCCCCCCCCCCGACAGCAGATCTACCCCCCCGTACAAGCATCA
GTTGACCCCCCTGGACATTTGAAATTACCCTAAAACTCTGCAAAAAGTGT
CCCCAAACAGAGCAAGTTTACCCCCCCTGGACAAGGAGAATTTTGTAGAT
TTTTCACTACCCCCCCAGACACTATATCTTCTACCCACACTATATACAGA
CATTTCTTGGAAGAGCCCAATGTGAAATTTGTGAGATCGAAACCCATTCG
AATCGTTTCGCACTTCCCGTAAGTGTATATTCCAACATATATAGGGGGAT
TTTTAAAGAAAGAAAATTCCTTTTTATTATAGAGCACCTGCTGTTTACTT
CGTACATTACGGTCCGAAAACCATATTGTCAAATTTTGTTTGTCAATATA
TTGTGTAGTCTAAGTAGCCCTTTAGGAACCAATTCATTTGTATGACCAGG
TCGGGACTTGACCGACAACCTTGCCCACCGGGACCGAATGTAGTTCTTCC
AATACTGTGTTTAAAAGCTAAGGAAAAACATATGTTTTATTCTATTTATT
CGTCCATCAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGC
GGTTTGTTTTAAATATAATTTCATTCATTGATTATTTATCATATGTATTG
GTTCTTTGAAACTTACCTTAAATGAATTAATTTACACGAGAATTATATTT
TGCGAGTTTCCCAAAATTCGTGAAATTCGCGAAATTTGATTCTCGTAAAA
TCTTTCAAACCTGAATTCTTCCCAAAAACCAATTTTTTGCCAAAACCCCT
AAGAAAATTATAGATATTAGTTGAAAAAGAGGCCGATTCGCGAAAATAAA
TCCCACAGAAAATTTTTTTTGAAAAAAAATTATCTCGCAAATATTGAGGT
AATTAATATTTTTTAGTACGCCCATTCTTTATTTCGAGTACCCTCATAGG
AGCCCTCCCCCCCCCGCTTTAAAACAATATCATTGTAGTGGACAAATACC
TCTTTCCATTCCCATCGCAAAATTCATCCCGACTGAGACTGGTAATTGGC
AACCTTATTACTTGGGAGAAAATGCTCTGAAAATGGCATTCTCAGCTTCA
GCAGCCAAACTCCATGATGGTGATATTCTTAGCATATTCTTAATTTTTTG
TCCAATTTCATCATGAACATTCTTATAAAGTAGGTTCTTACAAAGAAAAG
CGTGAATTGTCATCTTTTAGTAATATTCAACTCTTTCTTATTAGATTCTA
TCACAACGTTGCTTCTCGATCACATCAAGGGAAACAATCAGCAAGCTCTA
ACCTATCTTCTTATTAAATACAGCAAGGAAGTAAACAAAACTGATCTCAT
AATTTTGTTTACCAAAGCTCTTAGATTGTGCACACATAATGAAATACACG
TTGCTATTCCTATACTACTACATTACCATCCTGAACTACTGGATATTGAG
TTACCAGAGTTTCAAAACACTAAACCAGTATGTGCTGCTCTATCTAAAGG
GAATATAATCTTGTTCAAATACTTGTTAGACCATAGTAATCAAATTGATT
TGGGAAATGTTAATGTTGACATGTTTCAAGGACTGAAAGGCGACGAGAAG
AAAATGGTTAAGAAATTGCTGAAAAAGAAAAGGTGAGAAATTTCCTCTTT
TGGTTAAACACGTAGGAAAATTACAGAGACTAGTTCACAGGGGATGCATT
TTAGGTACCTTTGAGTAGGTGATTTAAACATTGAATTTCAAATGGGGATG
AAGTTAAAGTCAATTACTCAGTGGGGCTGAAATTGGAGGGTATTATTCCC
ACTGAAAACGAAATTTTGGCCAAATTTTCCAGTGGGGCTGGGTCCCAGCG
GGTCTGTGACACATGGGTGTGAAAAGCAATTTGCAGCAGCCTACAGCCTC
ATCCCCAGCCTATTTATCTTCACTCTACTTCACTCTATGTTAGCTGATGA
TGCCAGATACTACCCTGGCACTGTCTAACTTCCAACAACAATAATGTAAC
AAAACCTAGGAAGTTGAGCTAAGTCAGCCTATTCGGAATTTGAAATATTG
TTTATCATTTTTTAGGAAACTATGTGGCGATACTAAAAGTTAGCCTAACA
GGAGAGATCAATTATATACACAAATTATTGGCTACTTGAAGAACGCATAT
TTTTCAAATAATTTATCATAACGCATTTACAGATATTTAAAGTTAGCTTT
TCTTCAGTACTAGGAATAATAAAACTATGTTATTCTTTTCTCTTGTCATG
CATTTTTATTTCATTACCCTTAGCACCAT Coding sequence (CDS) from alignment at sc0000182_pilon:515373..519001- >MSTRG.17744.2.p1 ID=MSTRG.17744.2.p1|Name=MSTRG.17744.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4788bp|location=Sequence derived from alignment at sc0000182_pilon:515373..519001- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTATGTGGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCT
CGATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTA
AATACAGCAAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAA
GCTCTTAGATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACT
ACTACATTACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAA
ACACTAAACCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTC
AAATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGT
TGACATGTTTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAAT
TGCTGAAAAAGAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAA
AATAGCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAA
CTTACTCCTATAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAA
AGCTGTAGGTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACA
AGGTCGTAAAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTC
GTGACTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAA
ATTGAAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTT
GAAAATGAGAAAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAGGA
AACTATGTGGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCTCG
ATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAA
TACAGCAAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGC
TCTTAGATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACTAC
TACATTACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAAC
ACTAAACCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAA
ATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTG
ACATGTTTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTG
CTGAAAAAGAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAA
TAGCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAACT
TACTCCTATAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAG
CTGTAGGTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAG
GTCGTAAAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGT
GACTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAAT
TGAAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGA
AAATGAGAAAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAA
CTATGTGGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCTCGAT
CACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAATA
CAGCAAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTC
TTAGATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACTACTA
CATTACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAACAC
TAAACCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAAAT
ACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGAC
ATGTTTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTGCT
GAAAAAGAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAATA
GCGAACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAACTTA
CTCCTATAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAGCT
GTAGGTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAGGT
CGTAAAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGA
CTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTG
AAAATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAA
ATGAGAAAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACT
ATGTGGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCTCGATCA
CATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAATACA
GCAAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTT
AGATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACTACTACA
TTACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAACACTA
AACCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAAATAC
TTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACAT
GTTTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTGCTGA
AAAAGAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGC
GAACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAACTTACT
CCTATAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAGCTGT
AGGTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAGGTCG
TAAAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACT
CAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAA
AATTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAAT
GAGAAAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACTAT
GTGGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCTCGATCACA
TCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAATACAGC
AAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTTAG
ATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACTACTACATT
ACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAACACTAAA
CCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAAATACTT
GTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACATGT
TTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTGCTGAAA
AAGAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGCGA
ACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAACTTACTCC
TATAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAGCTGTAG
GTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAGGTCGTA
AAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCA
GTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAA
TTTGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAATGA
GAAAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAGGAAACTATGT
GGCGATACTAAAAGTTAGATTCTATCACAACGTTGCTTCTCGATCACATC
AAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAATACAGCAA
GGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTTAGAT
TGTGCACACATAATGAAATACACGTTGCTATTCCTATACTACTACATTAC
CATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAACACTAAACC
AGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAAATACTTGT
TAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACATGTTT
CAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTGCTGAAAAA
GAAAAGGTGGTCAAAATATGATCGTAATGACAATCAACAAAATAGCGAAC
TAACAAAGAAGTGTCAGACTTTGAAGAAAATGAATTGCAACTTACTCCTA
TAAAACCGTCGAGCAGTCTAGCCTGTTGTCACATACAAAAAGCTGTAGGT
TGATGCAGAAAGAAGCAGAAGACAATGTCATGACATTACAAGGTCGTAAA
ATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCAGT
TACCAATGCAAATAAATTGATTGGGAAGTACAATCAAGAAATTGAAAATT
TGACTGGGAAATTGAAAATACTCAAACCATGGCTGAGGTTGAAAATGAGA
AAATGGACAGTTGTCCCTTTTGCCTCTGTAGGAAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000182_pilon | genome | sc0000182_pilon:515373..519001 - |
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