|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:592345..600530+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17742.4.p1 ID=MSTRG.17742.4.p1|Name=MSTRG.17742.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8186bp|location=Sequence derived from alignment at sc0000182_pilon:592345..600530+ (Clytia hemisphaerica_ch_hm2_pilon)
TACAGGGCAGGTACGTTACAGAAACTTCTTCAGTAGCTAGTTAGTAGgtg
ttttttcttgtatttttctttgcCTTAAGGGAATGAATTTAATGCAAGAA
TTAATTAAATatggaataaattaatgcaagcaacccccaaaaaattttat
gttttgcgGAATAAATTAGTGCGAATAGGCCCATTTTAAGGGATTTTGCG
GAATTAATTAATGTGAAATAGcctttcaaatcattttttttccttttcaa
gaaACAGAAcaaactaaaaacaaaaaaaaaacgtgtaaaaatgtaccctt
acagtgcactcctctgacagttacatcaatatgccttcttacctgtcttt
aaaaatataaataaaagtaatcacggaaaaggatgCGaaaaaaaaggaca
taagtgtgagaacagagtaatcaaactcgttagaaaaagtaccattagaa
gtcataaaaaatcaacctgaataaatgcaatcgaaattccagagaacttc
ataattccccaaacaacattacattactatgtcaaactcccatcacataa
attttacaattacgtcagagtagactacgctcgccaccgaagaggtttat
ttggaaagggtaattatattttattgttcgcttcttttttaaagattcgc
cgggttggaaaagtatgaatttctttgtacatattttacctaccccaaat
atttaggaggctgagttttaaacgaatcgtcaagTtgaAACGAACGATAA
AtgTAtcaaggtctgttttaTttaccccctggtgacttaacaaaagagac
ttaactcgatgttacaatccaattattgaaagtttgtctgggccttttta
taatgagcgagacatacgttctctgaattgaattgaattgaatatatttt
cgctgcaacacagcaggataaccccttacaaaaaaaaaatagatttctct
aatacaatgggGaacctagaagaaactgaaaaattattacagaactAaag
aacaaatgaataaacgattatcatAAtattaatagtgacacaaaataatg
aatataagaaattttacttttttttatgaaaatttctttgagtagtttta
tctATAAGTTCTTCCTGTTACGACCCAccccccccaccctgggaaaacac
actaGCCTCATGcacacacacacgcacacacacacacacacacacacaca
cacacaaagattattcgttttcagctttgtatttgtctaaatagaatttt
gtagctaaagattttagttcatcagtatcaaggttgtgaaaatcagtgtc
aggatgatttattagtaactcattccattgttttgacgaaagacaagagt
taagtccaaaatttgtggttttgaccgttgaaagttttagtagtttaata
gctttgcccctggtgccagttttgtgatcaatttcatcaaaattaagtgt
tgataggacatcagatggaagattaccctggaggtatttttgaataaata
agatattcattactttcacctgatcaaagattttgagtaatttaagttca
gcaaacaggggagtggcagaagttcttggttcactaaaggtcatgagtct
tagtgcagtgttttgaagagtaagaattctatgtgtgacagtattgtcac
acagtccccagagttgactagcatagcgaacatgagaagcaaaaattgca
tgataaatgtttagaaggatgtgaattggaacatagtgacgaagtttgga
tattgccccatttgcccttctcaatgtagcagcacggaaagaagtatgaa
ccttccagtttagatgattgtcaaggtgaacacccaaatacttcacactc
ttacttggtgatagaattttcccgcaaagcttaattcttggaatacagtc
catctgtctccaaggggaacgaaaaataacaaactcagttttgctagcat
tcaaagaaattttgttggcattaagccagctgactaaaactctgagatca
gcattaaccctcccacaaagactccatacagtttttgaaaaatttagtaa
atgagtatcatcagcaaaatgatatgtttcagaggttcttatacagcggt
gaagatcgtttatatacaacaagaacagcagaggacccaagactgaaccc
tgaggaactccatgattaatagattttaaaagggaatttgagcctgaaag
agaaacatactgggagcggttagtgaggtaagatcggaaccagtcattaa
caatgcctctgactccgtagtgatcaagtttttcaagtaagatttcgtga
tcaactgtgtcgaaagccttttgtagatcgacaaatacaccacaggcaaa
cccaccattgtcaagatagtttcggatacgttcgacaatattaatgagtg
tatgctcagtagagtgagccttacgaaaaccaaattgtcgagagtagatt
tgattatggttttcaagaaaatcagaaagACGTGAGTacatcactttctc
aaaaattttttcaatgttagataagagtgaaattggcctataattagaga
cttcaaggggagaacctttgtgtttgaagacaggcacaactttggatatt
ttgagagtagagggaaaaataccactgagaaaggagtagtttatcagcgc
cgatattggcacagaaatatcaagtcttaaaagtttaaggatttttatag
gaatactatgaggaccacttgctttatttaatgagaaagagccaatcacc
TTCGCAATTTCTTGATTAGTGGTTGGTGCTAAGAGGATGGAATGCAGATT
TGGATCTTTCATGAAACTGCTGAAGTGATTGTAAGAAGGCggctgattac
gcaattttcatattgacattctcgaggcattttgatgtaactgtctgaAA
GTACACCCTTTATACAGTGCACATGTCATAGgacggaccatatgagtgcc
cccccagATGTCTTTCTAGCAATTGATTGGGCCCTTATTAAGTAAGAGAA
TAATGTCAAATATGGGAATAATTTATGCACTGGAGTCCAGAAAATGAATA
TTTGGGGTTTACAcctccagacgatctcaatcgaacggaatcgacgatcg
aaccagtcgaaccaaatcgaacgcaatcgaccaattgaaattcgattgtc
gaacgcaatctcaatcgaatattaccgcaattttcagattcgattgatat
tcgattgcgttcgattgatgttcgattgcgttcgattgcgttctatcgtc
gattcattgacccccgaattgttcatcgcataatttctacgggaaattga
aagtaatttcattcggcttgtgatgtttgagagcttggatgttggaaagc
tgcaagaataaagccagacgatctcattcgaacggaatcgacgatcgaac
cagtcgaacaacaatcgaaccaatcgaatattacccagaattttgacgtt
cgattgagattcgattgcgtttgacaatcgaatttcaatcggtcgattgc
gttcgatttggttcgaatGATTCGAtcatcgattccgttcgattgagatc
gtctggacacCTCCAAAATCAGCaatttattagaaaaaaaatgctGAATT
TATAATgcaaatggccaaaattttttgagttttgcggaatttaattttgc
gaaaaagggccaaatttgcattaattaatcctgcattaatttattccgca
ttaattaattctcacattaatttattcccttaaggtatatatagtctaga
agtataaaaccttcaactactcaaaatggaaacaataaagacaaaaaccc
acaaaacaaaaagacaatacaaatacaacaaaaatctagaatgaacattc
acagaaaatcaatcaggttggagtagaaaaggaaaatatgatgacataga
aatccgtcaatgtaaaactagtgatctaaaatgactttaaggaagaaagt
aactcaatatgagtcaaaaaatatttcaaaaaatatttcaaaaaaaaaac
aacacattatctgttcctcagttttcgacctacacaggatttcggccatt
tgtgaaaatatcctcctatatgatggaaatagggttgtgtataTATATTC
AATGATTGAGACATGTATCAGCATCACAGTACGATGTAataattttgaac
ttgaaaataaaattctgaACGTGACCCAAATTCCCGGCGGCACAAGCTGA
CTCATGCATGTTATAcaatatcatactccaggatgcaagtgaaatttttc
aatctgtggacctagacgggggttcggctATTATCAGTTAGTAGGGTTAG
GGTTGAAGCTCAAGAGTCATACTAGGGTATTCGTACCCTCTGAGACTTAA
CTTAGGATctcgtagggatccttgtagggttgggagctttgtTAAtcaag
gtctgtaaattacatgctataagtatttgtgaaacAGCATCTTGTTGGTG
CAATCGGGTAAGAATTGGATTTGTAAACCTAGATTGCTTGCATTTGGGGG
TTTGAGCTGAGGTGGGAGACTTTTCTCCAGTACCGACaagttttagaaaa
atacttagaaaacagttagaaacacttgaaaaagttagaaaatcaggata
gaagataggatcAAAGTAGAAATTAGAGGGgaaataagagaggatgcacc
ctggagtatgatatcgtttgccaaccgttTGGGGCATGTTCAGGCCAGGT
TTTAGTGGGAAAATCCAAGACTTTTTTGCTCAAACTTGGTTCAAGCTTca
atttttggacaaaaaatgttttgctaTTTTAGCTAGCCTGTACAGGACCC
AAAAATGTTCAGGTATATCTTTTCAAGCCATACTAATTGTGGGTTGTCAC
CTGAAATCATAAGCTActgccttctttaaaaaatggatATACTGTATAAG
ATGGTTTGAATCATTTTACAATGAATTTCCTACCATGTAACTGAGCAAAA
CATAGCAAAACcttcaagcaaaatatttatatctccagatctctcttcta
tctctgtttatatctctatctatcACTAAATTTGACTTTtagtaagaaaa
taaagaatttcaaCAACTAAGAACCGTGTCAAGAACCCCTTTTTagtaat
ttcaaattgtgatttctcaacttttggaaaaaagttagaaaaaaaatcaa
aggttttaccccccccccccttgcagAAGGTTTCTGCAAGCTGAATAcat
caaaccatctgattatccctttgaGTCTGCACTGCAATGGCCACGGtcta
ataataacaataaaataataaattatctAGCCTTAATTTCAGCTTATAGA
AGAGCTTGTCagagtcaaaaaaatttctgacatatttatctttatgtcaa
aaataattaGAATAAAAATCAGATGGGGGCTTTAAAGTACCTCCATACaa
aaaaaGAAGTTTGTAGCATCAAAATGATAAAGTAAACAATAGCTTCCACT
ATTCTTTCACTTTTCATCtccattttatttgaaattatttttcacaaaaa
ttaaagtatTCTGAATTAACTTGTTAAGAAATgacaagcaaaataaagat
taGCGCACACTTTACTTTAAAGCGAATGCACTTAAGCATAAAACGCTTAC
CCAGCAAGCCAgtataaattaataaattaattttgtttaaaatgatGCAA
TCCActtaaactttttttccaaaatatgtgTTACAGTGATCATCATCAAC
CCTTATTAACCCAAAGTTTGGTTTCAACTTATTAAAGTTCACTTGTTCAC
TTCACACGGGTCGACCCTTGCTACGTTAGGGGAAATGGGTAGACAGTCCA
GGGCTGTGTTAACGGCATTATTATCTTTACTTTTTTAGGATCTCAACAAT
ATGCCACCAAAACCACCGCCATATGTCATTTGTTATTTATGTGGAAGAAA
ATATGGCACCAAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGT
GgcatgctgaaaataagaaattaccCAAACATTTGAGACGTAAAATGCCA
ACGAAACCTGATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTA
TGTTGATCAAATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGA
TTCCTTGTGGGAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTT
CATCAGAAGTCTTGCACTGTTGATAATCCAATGAAAAGTAGGACAGGAGG
AAAACCAGCTTCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGC
CGATAACTAGTGATGGGAATAGTGTTAATCCAACACAATCGAATACACCA
TCAAAGATAattcataaaaacaaactttgttGTTTGTGTATGAAAAAGAT
TCCAACATCTATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAA
TAGTAGAATTGAAATACTCTGATGATTTATCAGAACCATCAACTTCGTCA
AGTGTTGAACGTAAAAATActtttaacaaaggaaaaatggCTCAGAAACC
AAAAGCATCAAGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACAT
ACGATCTAGATGATTCACAGTCCGTAGAAAGACCGTCAACCAGAACATTA
AAACGAAGAACACCATCTAATAACACACAAGGTACTTACGATGTCGATTC
CCCAGATGAGGACCCTGCTCCTccaaaaccaaaacctagcaaaacaaata
aaccaaagaaatctccaatcaaccaagcaccaaccTACCCATCATCAAAT
AATGATTTTGTAGACCAGGGAGACGTTTCTTTAACACCGTGCCATCTTTG
TAATCGAAAATTTGCTTCAGATCGTATCGATAAACACATGGTAATATGCC
AGAAAACAACTTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAACGT
TCTGTTGGAAGTGATGCTAACCCGATCAAAAAGTCTAGTAGTTCTTCGTC
AGCATCGAAGAAAACTGGTGGTAATTGGCGTCAAACTCACGAGGACTTTA
TTCGTTCAATTCGTGCAGCTAAACAAGTTACCAAACATATGGCAAGTGGT
GGTAAAGCATCAGATCTACCTCCACCACCACCATCCTTGAATCCTAATTA
CGTCCATTGCCAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTGAAC
GACATATTCCTAAATGTGCTACTACACAGAATCGaccaaaaccaccaaaa
caaaaagcattagacgtctataataaaaaaccacaatccaaaacaacaTC
TAAACCAGTCAGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAGGCT
CCAACAATAACCTGTTACGACAATCATCAAGTGGGGGTTATAACAGTCCA
ACTATTGACCGAGGATATCAAAATTACGACACGCCCTCTTCCAGTAAACA
AAGTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACAAGG
CAAAAACTTTCAATGGCATCAACAACAGGACTCCTGCTGCGAATAGAGGG
TTTACATACAACGCAATGAATCATACGGGACCAAATTTCTTTGGTTAAGA
AGTGTAACTCGAAGATTTCCTCAACAAAACTCTTAatatttttccctaaa
aatgggctcttccataaaatttttttacatgggggttggaggatacattg
gatattttgtccgggggggggggtagtgaaaaatctgcgaaatttgcctt
gtttttggggaaaatttgctctgtttaggggtagttttgaatgtccaggg
gtaagCTCTGTTTtccggggtaaatttccaaaaaacatatcctccacccc
tatattcaattttttttctggaaaagcccaatacttGAAAAAGTAGCTGT
AGGCACCAATCAATGCCCTGTTGTAAATAAAATGTTTAGATCTGGCTGTG
ATTATAATTTTATGTCTACATCCTCATTTTAGGGATTTCGTCAATTTTAT
TAACAGTTTTATTAAAGATTTTAAACTTGAACACTGCTCTTTGATACCTT
ATTGTATTGAACTTTTGAATTCATCGTATAATTACGTAAACTGtgttgta
aaagattttcaaatacaTATTGGAATGAACCTTTTATAAAATATTACAAT
AATACTTCTCGTGCATTAAATACTTGATGTAAATCCGAGTATGCTCCTTG
TGAAGTGGCTTTTCTACCATGTATGGTGAAAGCCAT Coding sequence (CDS) from alignment at sc0000182_pilon:592345..600530+ >MSTRG.17742.4.p1 ID=MSTRG.17742.4.p1|Name=MSTRG.17742.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3438bp|location=Sequence derived from alignment at sc0000182_pilon:592345..600530+ (Clytia hemisphaerica_ch_hm2_pilon)
ACAGGGCAGGATCTCAACAATATGCCACCAAAACCACCGCCATATGTCAT
TTGTTATTTATGTGGAAGAAAATATGGCACCAAATCGATTGTCATTCATG
AGCCAAGCTGTATTAAAAAGTGgcatgctgaaaataagaaattaccCAAA
CATTTGAGACGTAAAATGCCAACGAAACCTGATTACAGTAAATTAGCAAG
TGGTGATTACGATGGCAATTATGTTGATCAAATGAATGATGCAGCTTATA
AAGCGGCACAAGAACAATTGATTCCTTGTGGGAATTGTGGTAGAACTTTT
TTACCGGAACGGTTACAAGTTCATCAGAAGTCTTGCACTGTTGATAATCC
AATGAAAAGTAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCATCCAATC
CTGAAATCAATAACAACAGGCCGATAACTAGTGATGGGAATAGTGTTAAT
CCAACACAATCGAATACACCATCAAAGATAattcataaaaacaaactttg
ttGTTTGTGTATGAAAAAGATTCCAACATCTATTCTTCCAAATCATTTGG
TAAAATGTAATGACTCTAAAATAGTAGAATTGAAATACTCTGATGATTTA
TCAGAACCATCAACTTCGTCAAGTGTTGAACGTAAAAATActtttaacaa
aggaaaaatggCTCAGAAACCAAAAGCATCAAGCTCGACATCCTCGCAGG
AAAGTGTCAACCAATCAACATACGATCTAGATGATTCACAGTCCGTAGAA
AGACCGTCAACCAGAACATTAAAACGAAGAACACCATCTAATAACACACA
AGGTACTTACGATGTCGATTCCCCAGATGAGGACCCTGCTCCTccaaaac
caaaacctagcaaaacaaataaaccaaagaaatctccaatcaaccaagca
ccaaccTACCCATCATCAAATAATGATTTTGTAGACCAGGGAGACGTTTC
TTTAACACCGTGCCATCTTTGTAATCGAAAATTTGCTTCAGATCGTATCG
ATAAACACATGGTAATATGCCAGAAAACAACTTCCAAAAACCGTAAAGTA
TTTGATTCATCAAAACAACGTTCTGTTGGAAGTGATGCTAACCCGATCAA
AAAGTCTAGTAGTTCTTCGTCAGCATCGAAGAAAACTGGTGGTAATTGGC
GTCAAACTCACGAGGACTTTATTCGTTCAATTCGTGCAGCTAAACAAGTT
ACCAAACATATGGCAAGTGGTGGTAAAGCATCAGATCTACCTCCACCACC
ACCATCCTTGAATCCTAATTACGTCCATTGCCAGTACTGTGATCGTAGAT
TCAACCCTGAAGTTGCTGAACGACATATTCCTAAATGTGCTACTACACAG
AATCGaccaaaaccaccaaaacaaaaagcattagacgtctataataaaaa
accacaatccaaaacaacaTCTAAACCAGTCAGCTCAGCTAGAAAGAAAC
CATCCAACCAAAAAGTAGGCTCCAACAATAACCTGTTACGACAATCATCA
AGTGGGGGTTATAACAGTCCAACTATTGACCGAGGATATCAAAATTACGA
CACGCCCTCTTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCAAGGCAAC
AAGGAAATGATCCTTACAAGGCAAAAACTTTCAATGGCATCAACAACAGG
ACTCCTGCTGCGAATAGAGGGTTTACATACAACGCAATGAATCATACGGG
ACCAAATTTCTTTGGTTAAACAGGGCAGGATCTCAACAATATGCCACCAA
AACCACCGCCATATGTCATTTGTTATTTATGTGGAAGAAAATATGGCACC
AAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGTGgcatgctga
aaataagaaattaccCAAACATTTGAGACGTAAAATGCCAACGAAACCTG
ATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTATGTTGATCAA
ATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGATTCCTTGTGG
GAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTTCATCAGAAGT
CTTGCACTGTTGATAATCCAATGAAAAGTAGGACAGGAGGAAAACCAGCT
TCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGCCGATAACTAG
TGATGGGAATAGTGTTAATCCAACACAATCGAATACACCATCAAAGATAa
ttcataaaaacaaactttgttGTTTGTGTATGAAAAAGATTCCAACATCT
ATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAATAGTAGAATT
GAAATACTCTGATGATTTATCAGAACCATCAACTTCGTCAAGTGTTGAAC
GTAAAAATActtttaacaaaggaaaaatggCTCAGAAACCAAAAGCATCA
AGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACATACGATCTAGA
TGATTCACAGTCCGTAGAAAGACCGTCAACCAGAACATTAAAACGAAGAA
CACCATCTAATAACACACAAGGTACTTACGATGTCGATTCCCCAGATGAG
GACCCTGCTCCTccaaaaccaaaacctagcaaaacaaataaaccaaagaa
atctccaatcaaccaagcaccaaccTACCCATCATCAAATAATGATTTTG
TAGACCAGGGAGACGTTTCTTTAACACCGTGCCATCTTTGTAATCGAAAA
TTTGCTTCAGATCGTATCGATAAACACATGGTAATATGCCAGAAAACAAC
TTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAACGTTCTGTTGGAA
GTGATGCTAACCCGATCAAAAAGTCTAGTAGTTCTTCGTCAGCATCGAAG
AAAACTGGTGGTAATTGGCGTCAAACTCACGAGGACTTTATTCGTTCAAT
TCGTGCAGCTAAACAAGTTACCAAACATATGGCAAGTGGTGGTAAAGCAT
CAGATCTACCTCCACCACCACCATCCTTGAATCCTAATTACGTCCATTGC
CAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTGAACGACATATTCC
TAAATGTGCTACTACACAGAATCGaccaaaaccaccaaaacaaaaagcat
tagacgtctataataaaaaaccacaatccaaaacaacaTCTAAACCAGTC
AGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAGGCTCCAACAATAA
CCTGTTACGACAATCATCAAGTGGGGGTTATAACAGTCCAACTATTGACC
GAGGATATCAAAATTACGACACGCCCTCTTCCAGTAAACAAAGTTTTAGC
AGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACAAGGCAAAAACTTT
CAATGGCATCAACAACAGGACTCCTGCTGCGAATAGAGGGTTTACATACA
ACGCAATGAATCATACGGGACCAAATTTCTTTGGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:592345..600530 + |
|
