|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:592072..600530+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17742.3.p1 ID=MSTRG.17742.3.p1|Name=MSTRG.17742.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8459bp|location=Sequence derived from alignment at sc0000182_pilon:592072..600530+ (Clytia hemisphaerica_ch_hm2_pilon)
gaatgttttcgatacgatgtaaacaaatatggcggatTGGTAAATCTCGA
AACATCGCTATTTTTATccgttttgttgatttttcttgaCTTTGGTGCCG
ACAAAATGGTAAGAATTCATTAATTTTAATATGCTTTTCATGACTTCCAT
AGTGATCATTAATGATTTACCcgttaaaatatgaaaataaagtttCAAGG
CACTAGgttgggaaaatattttcagttactTTTTATAACCAtcttttttg
aatgaatgaGGTCACATTTTTTATACAGGGCAGGTACGTTACAGAAACTT
CTTCAGTAGCTAGTTAGTAGgtgttttttcttgtatttttctttgcCTTA
AGGGAATGAATTTAATGCAAGAATTAATTAAATatggaataaattaatgc
aagcaacccccaaaaaattttatgttttgcgGAATAAATTAGTGCGAATA
GGCCCATTTTAAGGGATTTTGCGGAATTAATTAATGTGAAATAGcctttc
aaatcattttttttccttttcaagaaACAGAAcaaactaaaaacaaaaaa
aaaacgtgtaaaaatgtacccttacagtgcactcctctgacagttacatc
aatatgccttcttacctgtctttaaaaatataaataaaagtaatcacgga
aaaggatgCGaaaaaaaaggacataagtgtgagaacagagtaatcaaact
cgttagaaaaagtaccattagaagtcataaaaaatcaacctgaataaatg
caatcgaaattccagagaacttcataattccccaaacaacattacattac
tatgtcaaactcccatcacataaattttacaattacgtcagagtagacta
cgctcgccaccgaagaggtttatttggaaagggtaattatattttattgt
tcgcttcttttttaaagattcgccgggttggaaaagtatgaatttctttg
tacatattttacctaccccaaatatttaggaggctgagttttaaacgaat
cgtcaagTtgaAACGAACGATAAAtgTAtcaaggtctgttttaTttaccc
cctggtgacttaacaaaagagacttaactcgatgttacaatccaattatt
gaaagtttgtctgggcctttttataatgagcgagacatacgttctctgaa
ttgaattgaattgaatatattttcgctgcaacacagcaggataacccctt
acaaaaaaaaaatagatttctctaatacaatgggGaacctagaagaaact
gaaaaattattacagaactAaagaacaaatgaataaacgattatcatAAt
attaatagtgacacaaaataatgaatataagaaattttacttttttttat
gaaaatttctttgagtagttttatctATAAGTTCTTCCTGTTACGACCCA
ccccccccaccctgggaaaacacactaGCCTCATGcacacacacacgcac
acacacacacacacacacacacacacacaaagattattcgttttcagctt
tgtatttgtctaaatagaattttgtagctaaagattttagttcatcagta
tcaaggttgtgaaaatcagtgtcaggatgatttattagtaactcattcca
ttgttttgacgaaagacaagagttaagtccaaaatttgtggttttgaccg
ttgaaagttttagtagtttaatagctttgcccctggtgccagttttgtga
tcaatttcatcaaaattaagtgttgataggacatcagatggaagattacc
ctggaggtatttttgaataaataagatattcattactttcacctgatcaa
agattttgagtaatttaagttcagcaaacaggggagtggcagaagttctt
ggttcactaaaggtcatgagtcttagtgcagtgttttgaagagtaagaat
tctatgtgtgacagtattgtcacacagtccccagagttgactagcatagc
gaacatgagaagcaaaaattgcatgataaatgtttagaaggatgtgaatt
ggaacatagtgacgaagtttggatattgccccatttgcccttctcaatgt
agcagcacggaaagaagtatgaaccttccagtttagatgattgtcaaggt
gaacacccaaatacttcacactcttacttggtgatagaattttcccgcaa
agcttaattcttggaatacagtccatctgtctccaaggggaacgaaaaat
aacaaactcagttttgctagcattcaaagaaattttgttggcattaagcc
agctgactaaaactctgagatcagcattaaccctcccacaaagactccat
acagtttttgaaaaatttagtaaatgagtatcatcagcaaaatgatatgt
ttcagaggttcttatacagcggtgaagatcgtttatatacaacaagaaca
gcagaggacccaagactgaaccctgaggaactccatgattaatagatttt
aaaagggaatttgagcctgaaagagaaacatactgggagcggttagtgag
gtaagatcggaaccagtcattaacaatgcctctgactccgtagtgatcaa
gtttttcaagtaagatttcgtgatcaactgtgtcgaaagccttttgtaga
tcgacaaatacaccacaggcaaacccaccattgtcaagatagtttcggat
acgttcgacaatattaatgagtgtatgctcagtagagtgagccttacgaa
aaccaaattgtcgagagtagatttgattatggttttcaagaaaatcagaa
agACGTGAGTacatcactttctcaaaaattttttcaatgttagataagag
tgaaattggcctataattagagacttcaaggggagaacctttgtgtttga
agacaggcacaactttggatattttgagagtagagggaaaaataccactg
agaaaggagtagtttatcagcgccgatattggcacagaaatatcaagtct
taaaagtttaaggatttttataggaatactatgaggaccacttgctttat
ttaatgagaaagagccaatcaccTTCGCAATTTCTTGATTAGTGGTTGGT
GCTAAGAGGATGGAATGCAGATTTGGATCTTTCATGAAACTGCTGAAGTG
ATTGTAAGAAGGCggctgattacgcaattttcatattgacattctcgagg
cattttgatgtaactgtctgaAAGTACACCCTTTATACAGTGCACATGTC
ATAGgacggaccatatgagtgcccccccagATGTCTTTCTAGCAATTGAT
TGGGCCCTTATTAAGTAAGAGAATAATGTCAAATATGGGAATAATTTATG
CACTGGAGTCCAGAAAATGAATATTTGGGGTTTACAcctccagacgatct
caatcgaacggaatcgacgatcgaaccagtcgaaccaaatcgaacgcaat
cgaccaattgaaattcgattgtcgaacgcaatctcaatcgaatattaccg
caattttcagattcgattgatattcgattgcgttcgattgatgttcgatt
gcgttcgattgcgttctatcgtcgattcattgacccccgaattgttcatc
gcataatttctacgggaaattgaaagtaatttcattcggcttgtgatgtt
tgagagcttggatgttggaaagctgcaagaataaagccagacgatctcat
tcgaacggaatcgacgatcgaaccagtcgaacaacaatcgaaccaatcga
atattacccagaattttgacgttcgattgagattcgattgcgtttgacaa
tcgaatttcaatcggtcgattgcgttcgatttggttcgaatGATTCGAtc
atcgattccgttcgattgagatcgtctggacacCTCCAAAATCAGCaatt
tattagaaaaaaaatgctGAATTTATAATgcaaatggccaaaattttttg
agttttgcggaatttaattttgcgaaaaagggccaaatttgcattaatta
atcctgcattaatttattccgcattaattaattctcacattaatttattc
ccttaaggtatatatagtctagaagtataaaaccttcaactactcaaaat
ggaaacaataaagacaaaaacccacaaaacaaaaagacaatacaaataca
acaaaaatctagaatgaacattcacagaaaatcaatcaggttggagtaga
aaaggaaaatatgatgacatagaaatccgtcaatgtaaaactagtgatct
aaaatgactttaaggaagaaagtaactcaatatgagtcaaaaaatatttc
aaaaaatatttcaaaaaaaaaacaacacattatctgttcctcagttttcg
acctacacaggatttcggccatttgtgaaaatatcctcctatatgatgga
aatagggttgtgtataTATATTCAATGATTGAGACATGTATCAGCATCAC
AGTACGATGTAataattttgaacttgaaaataaaattctgaACGTGACCC
AAATTCCCGGCGGCACAAGCTGACTCATGCATGTTATAcaatatcatact
ccaggatgcaagtgaaatttttcaatctgtggacctagacgggggttcgg
ctATTATCAGTTAGTAGGGTTAGGGTTGAAGCTCAAGAGTCATACTAGGG
TATTCGTACCCTCTGAGACTTAACTTAGGATctcgtagggatccttgtag
ggttgggagctttgtTAAtcaaggtctgtaaattacatgctataagtatt
tgtgaaacAGCATCTTGTTGGTGCAATCGGGTAAGAATTGGATTTGTAAA
CCTAGATTGCTTGCATTTGGGGGTTTGAGCTGAGGTGGGAGACTTTTCTC
CAGTACCGACaagttttagaaaaatacttagaaaacagttagaaacactt
gaaaaagttagaaaatcaggatagaagataggatcAAAGTAGAAATTAGA
GGGgaaataagagaggatgcaccctggagtatgatatcgtttgccaaccg
ttTGGGGCATGTTCAGGCCAGGTTTTAGTGGGAAAATCCAAGACTTTTTT
GCTCAAACTTGGTTCAAGCTTcaatttttggacaaaaaatgttttgctaT
TTTAGCTAGCCTGTACAGGACCCAAAAATGTTCAGGTATATCTTTTCAAG
CCATACTAATTGTGGGTTGTCACCTGAAATCATAAGCTActgccttcttt
aaaaaatggatATACTGTATAAGATGGTTTGAATCATTTTACAATGAATT
TCCTACCATGTAACTGAGCAAAACATAGCAAAACcttcaagcaaaatatt
tatatctccagatctctcttctatctctgtttatatctctatctatcACT
AAATTTGACTTTtagtaagaaaataaagaatttcaaCAACTAAGAACCGT
GTCAAGAACCCCTTTTTagtaatttcaaattgtgatttctcaacttttgg
aaaaaagttagaaaaaaaatcaaaggttttaccccccccccccttgcagA
AGGTTTCTGCAAGCTGAATAcatcaaaccatctgattatccctttgaGTC
TGCACTGCAATGGCCACGGtctaataataacaataaaataataaattatc
tAGCCTTAATTTCAGCTTATAGAAGAGCTTGTCagagtcaaaaaaatttc
tgacatatttatctttatgtcaaaaataattaGAATAAAAATCAGATGGG
GGCTTTAAAGTACCTCCATACaaaaaaaGAAGTTTGTAGCATCAAAATGA
TAAAGTAAACAATAGCTTCCACTATTCTTTCACTTTTCATCtccatttta
tttgaaattatttttcacaaaaattaaagtatTCTGAATTAACTTGTTAA
GAAATgacaagcaaaataaagattaGCGCACACTTTACTTTAAAGCGAAT
GCACTTAAGCATAAAACGCTTACCCAGCAAGCCAgtataaattaataaat
taattttgtttaaaatgatGCAATCCActtaaactttttttccaaaatat
gtgTTACAGTGATCATCATCAACCCTTATTAACCCAAAGTTTGGTTTCAA
CTTATTAAAGTTCACTTGTTCACTTCACACGGGTCGACCCTTGCTACGTT
AGGGGAAATGGGTAGACAGTCCAGGGCTGTGTTAACGGCATTATTATCTT
TACTTTTTTAGGATCTCAACAATATGCCACCAAAACCACCGCCATATGTC
ATTTGTTATTTATGTGGAAGAAAATATGGCACCAAATCGATTGTCATTCA
TGAGCCAAGCTGTATTAAAAAGTGgcatgctgaaaataagaaattaccCA
AACATTTGAGACGTAAAATGCCAACGAAACCTGATTACAGTAAATTAGCA
AGTGGTGATTACGATGGCAATTATGTTGATCAAATGAATGATGCAGCTTA
TAAAGCGGCACAAGAACAATTGATTCCTTGTGGGAATTGTGGTAGAACTT
TTTTACCGGAACGGTTACAAGTTCATCAGAAGTCTTGCACTGTTGATAAT
CCAATGAAAAGTAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCATCCAA
TCCTGAAATCAATAACAACAGGCCGATAACTAGTGATGGGAATAGTGTTA
ATCCAACACAATCGAATACACCATCAAAGATAattcataaaaacaaactt
tgttGTTTGTGTATGAAAAAGATTCCAACATCTATTCTTCCAAATCATTT
GGTAAAATGTAATGACTCTAAAATAGTAGAATTGAAATACTCTGATGATT
TATCAGAACCATCAACTTCGTCAAGTGTTGAACGTAAAAATActtttaac
aaaggaaaaatggCTCAGAAACCAAAAGCATCAAGCTCGACATCCTCGCA
GGAAAGTGTCAACCAATCAACATACGATCTAGATGATTCACAGTCCGTAG
AAAGACCGTCAACCAGAACATTAAAACGAAGAACACCATCTAATAACACA
CAAGGTACTTACGATGTCGATTCCCCAGATGAGGACCCTGCTCCTccaaa
accaaaacctagcaaaacaaataaaccaaagaaatctccaatcaaccaag
caccaaccTACCCATCATCAAATAATGATTTTGTAGACCAGGGAGACGTT
TCTTTAACACCGTGCCATCTTTGTAATCGAAAATTTGCTTCAGATCGTAT
CGATAAACACATGGTAATATGCCAGAAAACAACTTCCAAAAACCGTAAAG
TATTTGATTCATCAAAACAACGTTCTGTTGGAAGTGATGCTAACCCGATC
AAAAAGTCTAGTAGTTCTTCGTCAGCATCGAAGAAAACTGGTGGTAATTG
GCGTCAAACTCACGAGGACTTTATTCGTTCAATTCGTGCAGCTAAACAAG
TTACCAAACATATGGCAAGTGGTGGTAAAGCATCAGATCTACCTCCACCA
CCACCATCCTTGAATCCTAATTACGTCCATTGCCAGTACTGTGATCGTAG
ATTCAACCCTGAAGTTGCTGAACGACATATTCCTAAATGTGCTACTACAC
AGAATCGaccaaaaccaccaaaacaaaaagcattagacgtctataataaa
aaaccacaatccaaaacaacaTCTAAACCAGTCAGCTCAGCTAGAAAGAA
ACCATCCAACCAAAAAGTAGGCTCCAACAATAACCTGTTACGACAATCAT
CAAGTGGGGGTTATAACAGTCCAACTATTGACCGAGGATATCAAAATTAC
GACACGCCCTCTTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCAAGGCA
ACAAGGAAATGATCCTTACAAGGCAAAAACTTTCAATGGCATCAACAACA
GGACTCCTGCTGCGAATAGAGGGTTTACATACAACGCAATGAATCATACG
GGACCAAATTTCTTTGGTTAAGAAGTGTAACTCGAAGATTTCCTCAACAA
AACTCTTAatatttttccctaaaaatgggctcttccataaaattttttta
catgggggttggaggatacattggatattttgtccgggggggggggtagt
gaaaaatctgcgaaatttgccttgtttttggggaaaatttgctctgttta
ggggtagttttgaatgtccaggggtaagCTCTGTTTtccggggtaaattt
ccaaaaaacatatcctccacccctatattcaattttttttctggaaaagc
ccaatacttGAAAAAGTAGCTGTAGGCACCAATCAATGCCCTGTTGTAAA
TAAAATGTTTAGATCTGGCTGTGATTATAATTTTATGTCTACATCCTCAT
TTTAGGGATTTCGTCAATTTTATTAACAGTTTTATTAAAGATTTTAAACT
TGAACACTGCTCTTTGATACCTTATTGTATTGAACTTTTGAATTCATCGT
ATAATTACGTAAACTGtgttgtaaaagattttcaaatacaTATTGGAATG
AACCTTTTATAAAATATTACAATAATACTTCTCGTGCATTAAATACTTGA
TGTAAATCCGAGTATGCTCCTTGTGAAGTGGCTTTTCTACCATGTATGGT
GAAAGCCAT Coding sequence (CDS) from alignment at sc0000182_pilon:592072..600530+ >MSTRG.17742.3.p1 ID=MSTRG.17742.3.p1|Name=MSTRG.17742.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3426bp|location=Sequence derived from alignment at sc0000182_pilon:592072..600530+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCTCAACAATATGCCACCAAAACCACCGCCATATGTCATTTGTTA
TTTATGTGGAAGAAAATATGGCACCAAATCGATTGTCATTCATGAGCCAA
GCTGTATTAAAAAGTGgcatgctgaaaataagaaattaccCAAACATTTG
AGACGTAAAATGCCAACGAAACCTGATTACAGTAAATTAGCAAGTGGTGA
TTACGATGGCAATTATGTTGATCAAATGAATGATGCAGCTTATAAAGCGG
CACAAGAACAATTGATTCCTTGTGGGAATTGTGGTAGAACTTTTTTACCG
GAACGGTTACAAGTTCATCAGAAGTCTTGCACTGTTGATAATCCAATGAA
AAGTAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCATCCAATCCTGAAA
TCAATAACAACAGGCCGATAACTAGTGATGGGAATAGTGTTAATCCAACA
CAATCGAATACACCATCAAAGATAattcataaaaacaaactttgttGTTT
GTGTATGAAAAAGATTCCAACATCTATTCTTCCAAATCATTTGGTAAAAT
GTAATGACTCTAAAATAGTAGAATTGAAATACTCTGATGATTTATCAGAA
CCATCAACTTCGTCAAGTGTTGAACGTAAAAATActtttaacaaaggaaa
aatggCTCAGAAACCAAAAGCATCAAGCTCGACATCCTCGCAGGAAAGTG
TCAACCAATCAACATACGATCTAGATGATTCACAGTCCGTAGAAAGACCG
TCAACCAGAACATTAAAACGAAGAACACCATCTAATAACACACAAGGTAC
TTACGATGTCGATTCCCCAGATGAGGACCCTGCTCCTccaaaaccaaaac
ctagcaaaacaaataaaccaaagaaatctccaatcaaccaagcaccaacc
TACCCATCATCAAATAATGATTTTGTAGACCAGGGAGACGTTTCTTTAAC
ACCGTGCCATCTTTGTAATCGAAAATTTGCTTCAGATCGTATCGATAAAC
ACATGGTAATATGCCAGAAAACAACTTCCAAAAACCGTAAAGTATTTGAT
TCATCAAAACAACGTTCTGTTGGAAGTGATGCTAACCCGATCAAAAAGTC
TAGTAGTTCTTCGTCAGCATCGAAGAAAACTGGTGGTAATTGGCGTCAAA
CTCACGAGGACTTTATTCGTTCAATTCGTGCAGCTAAACAAGTTACCAAA
CATATGGCAAGTGGTGGTAAAGCATCAGATCTACCTCCACCACCACCATC
CTTGAATCCTAATTACGTCCATTGCCAGTACTGTGATCGTAGATTCAACC
CTGAAGTTGCTGAACGACATATTCCTAAATGTGCTACTACACAGAATCGa
ccaaaaccaccaaaacaaaaagcattagacgtctataataaaaaaccaca
atccaaaacaacaTCTAAACCAGTCAGCTCAGCTAGAAAGAAACCATCCA
ACCAAAAAGTAGGCTCCAACAATAACCTGTTACGACAATCATCAAGTGGG
GGTTATAACAGTCCAACTATTGACCGAGGATATCAAAATTACGACACGCC
CTCTTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAA
ATGATCCTTACAAGGCAAAAACTTTCAATGGCATCAACAACAGGACTCCT
GCTGCGAATAGAGGGTTTACATACAACGCAATGAATCATACGGGACCAAA
TTTCTTTGGTTAAATGGATCTCAACAATATGCCACCAAAACCACCGCCAT
ATGTCATTTGTTATTTATGTGGAAGAAAATATGGCACCAAATCGATTGTC
ATTCATGAGCCAAGCTGTATTAAAAAGTGgcatgctgaaaataagaaatt
accCAAACATTTGAGACGTAAAATGCCAACGAAACCTGATTACAGTAAAT
TAGCAAGTGGTGATTACGATGGCAATTATGTTGATCAAATGAATGATGCA
GCTTATAAAGCGGCACAAGAACAATTGATTCCTTGTGGGAATTGTGGTAG
AACTTTTTTACCGGAACGGTTACAAGTTCATCAGAAGTCTTGCACTGTTG
ATAATCCAATGAAAAGTAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCA
TCCAATCCTGAAATCAATAACAACAGGCCGATAACTAGTGATGGGAATAG
TGTTAATCCAACACAATCGAATACACCATCAAAGATAattcataaaaaca
aactttgttGTTTGTGTATGAAAAAGATTCCAACATCTATTCTTCCAAAT
CATTTGGTAAAATGTAATGACTCTAAAATAGTAGAATTGAAATACTCTGA
TGATTTATCAGAACCATCAACTTCGTCAAGTGTTGAACGTAAAAATActt
ttaacaaaggaaaaatggCTCAGAAACCAAAAGCATCAAGCTCGACATCC
TCGCAGGAAAGTGTCAACCAATCAACATACGATCTAGATGATTCACAGTC
CGTAGAAAGACCGTCAACCAGAACATTAAAACGAAGAACACCATCTAATA
ACACACAAGGTACTTACGATGTCGATTCCCCAGATGAGGACCCTGCTCCT
ccaaaaccaaaacctagcaaaacaaataaaccaaagaaatctccaatcaa
ccaagcaccaaccTACCCATCATCAAATAATGATTTTGTAGACCAGGGAG
ACGTTTCTTTAACACCGTGCCATCTTTGTAATCGAAAATTTGCTTCAGAT
CGTATCGATAAACACATGGTAATATGCCAGAAAACAACTTCCAAAAACCG
TAAAGTATTTGATTCATCAAAACAACGTTCTGTTGGAAGTGATGCTAACC
CGATCAAAAAGTCTAGTAGTTCTTCGTCAGCATCGAAGAAAACTGGTGGT
AATTGGCGTCAAACTCACGAGGACTTTATTCGTTCAATTCGTGCAGCTAA
ACAAGTTACCAAACATATGGCAAGTGGTGGTAAAGCATCAGATCTACCTC
CACCACCACCATCCTTGAATCCTAATTACGTCCATTGCCAGTACTGTGAT
CGTAGATTCAACCCTGAAGTTGCTGAACGACATATTCCTAAATGTGCTAC
TACACAGAATCGaccaaaaccaccaaaacaaaaagcattagacgtctata
ataaaaaaccacaatccaaaacaacaTCTAAACCAGTCAGCTCAGCTAGA
AAGAAACCATCCAACCAAAAAGTAGGCTCCAACAATAACCTGTTACGACA
ATCATCAAGTGGGGGTTATAACAGTCCAACTATTGACCGAGGATATCAAA
ATTACGACACGCCCTCTTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCA
AGGCAACAAGGAAATGATCCTTACAAGGCAAAAACTTTCAATGGCATCAA
CAACAGGACTCCTGCTGCGAATAGAGGGTTTACATACAACGCAATGAATC
ATACGGGACCAAATTTCTTTGGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:592072..600530 + |
|
