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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:500251..503830- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17612.2.p1 ID=MSTRG.17612.2.p1|Name=MSTRG.17612.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3580bp|location=Sequence derived from alignment at sc0000179_pilon:500251..503830- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAAACAGCTTAATATTACAACATTGCCATGGTAACTTTTTATTCTCCA
ATTCAAAAAAATATTAAACACTTCTCAAAAATAAATCACGTTGTCGAGCC
AAACCAAATCAAACTACATTGTGTGTATACGAAGTTTTTGAGAGTAAGAA
GGAAAGTGTTTTTCACTGCAAACTAAAGTGAAAGCTTATCGAAAAATAAC
GAGGAAAGGTAAAATAAGAAAAAAGTTTCATTTCTCCTTATACATCATAG
CTCATCTACCATTCACGCAACATAAGAGCATAATAAAGGAAGCATAAAAA
GTTGACCAATTGCAACTGCTAGTTTGTACAGTTTTCAAAACACGTCTGTG
GAACTGAGCCTGTATAACCATCTAGCTCTTCTTATTTTTCAGTAAAGAAG
ACCAAGAAGGGGAACCATCATGGAAGAAGTTTGTGATCGTTTATTGGAGC
GAATACAGAGCGACCCCAACGTTCGTGGATACAAAGAATCTCACGTTTTA
TTGGCGAACCTTTGTGAACTGTTCAACGAAAGATTTGAAGAGACGGAGCT
CATGATTACAGGTTCTTTGCATAAAGATTTTGAGTTTCTCTCTTGACTCC
CTCATATTACGAAACAAAATCCATTGGGTATTTGTCGATTTGTGAGCCCT
CTCCAACTTCGAAATTTTAGGATTCTCGAGAAAACAATGTCTAGTGCCAA
CATTTCCATTTTCACGTAAGAAATTGAAAAGTATCGATAAATTGAAAAGT
ATTAGAACAAAGAGATCATATTCATATTTGTTTATAATTCAATTCGTAGG
GAGCACCATGGAGAAAGGGAAGGTGGTGTGGGCCAATGATGTGGGAGATT
TGGATATCTTGGTATTCAACAAAATGCCTCAACATCTCATCGATACCCAA
CAAGTGAAAGACGTCCCTCGGCATCCTGGCTTCGTTTACATCATGCGGGA
CGGTGAACACATCACCACCAAGATGCTTAAAGATGGTACACCAAAGGTGA
TGGACGAGACCATCATGCCCATGCTGCAGATCGCTTCCATTGAAGGGAAA
GGTCTCTTCAAAGTTGTGCACGATCCCAACGGGCCTGCTACAAAGATCAT
TCTGCTCAGTAATCTACAATCTTTGAATGAACAATGGAAAAACATGGGTG
ATATTAATTACAACGAAATAGCACTCTTTCAGAACTTCGTTCGCGTTGGA
TTGCCTAGTGGCCCAAACAGACAAAACCTTACGAGCGAACAAGAGGAGGA
ACGGATCGAGAAGGCTACTTCAGCGTTGAAAGAGATATCCAAGCGAGAAC
GTAAAGATATATTTGAATTGAAAGATCTTTTAGTCAATGTTGTACCCCCA
ATTTTGGGGATGGAAAGTTTAAGTGAAATGTCGACATCTGCACCGAAGAG
CACAAAAGAAGATTTGAATGGAAGTAATGAAGCAGAAACCAAAGATGTCG
AATCGACTAAAACAAACCCGCCTACCATCATCCACTATGAAGAGAAATTA
GATATGGCGTCTTCAATTCCAGAGACAACCACCCGACATGCCAAATCGGA
GGAGTCGAATCCATCGAAAAATGAGGAGCAATATTTAAGCAACAAAGTCA
TGAACCATGTAGACGAGTGTGTAGAACCAGTACCAACCACGCAAGATCAA
GTAGGTATGACGGAGGATGAGATTTATGCTGAAGAGGGGGTGCAACCGTC
ACCGAGAACTTCCTCGGTAACCAGTCAACAAACTGGTAAATCGACTGAAT
GTAAAAGTAAAACTGAAGCGTATATGATAGATCGTGTTGCAAAAGAGGTA
TTCGGTGCGATGAAAAGAAGAGCAAATGAAATGACAGGATCACAAGCCGC
CAATGATGAAGTCAACGCAAACGTCGATGATGGAGAGTTCTCACGTGAGA
TTGGCATCGATATCGTCATTGCTTACAAATTGACCGAGTGGCCATCAATC
GCCACCGGATTTTTCCAGAGAACGGAACGTCAATGGCCGTCTGTTGAGAC
AACTGAAAAATTGAAGATGAGCTCAGTCTTTGTTGTGGTTAAACATCCAA
AGACAGATTTAGCAGAAGAAATGATTCCATACTGTTTCCGTTACTCTTTT
TCACACGGTGAGAAAATCCTTTGTCAAGACATGAATGAGATCCAGTCAAA
ATGTTATCGACTGATGAAACTTTTTCACAAGTCCGTGCTCAAGAAAACGT
GCGAAGGGAAGACGTCCTTTTCTTCGTACCACGTAAAGACAGCAATTTTC
TGGGTAAGTGAGATGAACGGTGAGGAGATTTTCCAAACAGAGAATTTAGA
AATCTGTATCACACTCATCATATCGTTTCTGTTGACCGCTGTCCAAGAGA
GACATTTGAAACACTTCTTCATCGAGCAAGCTAACCTCTTCCAATATTTC
AGTAATAAAGAGTTCGAAGAACTAGAGATCAAATTGAATGAAGCCATGAC
CAATTTAGAGGAAGCCTTTGAAAGCGTGGAATGTGAGTTCATTGCAATCT
CAGAGGATGTAGAAACCAACACCGTGGTACTATCAGCCGGAGAACAACCA
GAAACGAAGGGAAATGCGGCGAAGGATGACCGATATTTCACTTTGTACAC
ACGTTGGTCAGAAACGTACGACCGATTGACAACACATCTAGCACAAGAAG
TACACGATCCAACCTCTGATAAAGAGGGAAATGCGAAATTTCCAATGGAG
CTGAAACAATTATTCAGAGACAGTAAGATGACTTATGAGAGCATGTTGAA
TACATTTGCAACCATCAAAACGAGCATGTACACAAAACACAGCTTGAATC
CCGCAGACGCGCGACGTCCCATCGAAGATGTAGTCATGGAGGATATTCAA
TCCATGAGGTCCATTTTGAAATACGTCCTGAAGATTCCGAACATCGATCA
AATGGCAACCTCCGAAGAGGCGCTAGAGCAGCAAATGTGGAATGACATAC
AAAGTAACGATGGAGATTTGATGAACTACATTGCAGGATCCATGCCTGAT
GGAGATCAATTGCTTAATTCCCTTCTCGGCGCCTTCAAGTGAACTACGAA
ATTGTTAAGTTGTTTATACTCTACGAATGAGCTGGTAGAAATGATCGATC
GTCAGGCCAATATGAATTTTTCTTAAAAACGAATTTCTTACCTTGAAAGC
AATGTTGGTACACGACATTTGTTTGATATTTTTATTCTAATGTTTAAAGT
TTTGGTGGACAGTGCTTTTCGACGAAAATTTTCTTTAAAATCGATTCATA
GACGCATACAATGGAACAGCAAACTTTATTACCTTGAACGGGAAAACTTA
GTCGGGATAGCGACAAATCATTTGGGCAAGTGAAGAAACTCTCCTCAACG
AAACTCTTTTTTTTCTGGTCCACTTCAGGGGGGTGGTGAAAAAGAGTTTT
TCAAATGGACGAAATCTCCCTCCCCCCCTTTGAAGGTACCCCAATTTCAA
GCTCTTTAATTTCCAGTAAATTGTGGATAGCCTTGCCTATTCGATGATCT
TCTTTTCGAAATTGCTAAACTTTGAATTTTGGTAAATACACTTTTTATTA
CTTTTTAATTATTTTGGGCTTAAATTCAGC Coding sequence (CDS) from alignment at sc0000179_pilon:500251..503830- >MSTRG.17612.2.p1 ID=MSTRG.17612.2.p1|Name=MSTRG.17612.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4770bp|location=Sequence derived from alignment at sc0000179_pilon:500251..503830- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGCACCATGGAGAAAGGGAAGGTGGTGTGGGCCAATGATGTGGGAGAT
TTGGATATCTTGGTATTCAACAAAATGCCTCAACATCTCATCGATACCCA
ACAAGTGAAAGACGTCCCTCGGCATCCTGGCTTCGTTTACATCATGCGGG
ACGGTGAACACATCACCACCAAGATGCTTAAAGATGGTACACCAAAGGTG
ATGGACGAGACCATCATGCCCATGCTGCAGATCGCTTCCATTGAAGGGAA
AGGTCTCTTCAAAGTTGTGCACGATCCCAACGGGCCTGCTACAAAGATCA
TTCTGCTCAGTAATCTACAATCTTTGAATGAACAATGGAAAAACATGGGT
GATATTAATTACAACGAAATAGCACTCTTTCAGAACTTCGTTCGCGTTGG
ATTGCCTAGTGGCCCAAACAGACAAAACCTTACGAGCGAACAAGAGGAGG
AACGGATCGAGAAGGCTACTTCAGCGTTGAAAGAGATATCCAAGCGAGAA
CGTAAAGATATATTTGAATTGAAAGATCTTTTAGTCAATGTTGTACCCCC
AATTTTGGGGATGGAAAGTTTAAGTGAAATGTCGACATCTGCACCGAAGA
GCACAAAAGAAGATTTGAATGGAAGTAATGAAGCAGAAACCAAAGATGTC
GAATCGACTAAAACAAACCCGCCTACCATCATCCACTATGAAGAGAAATT
AGATATGGCGTCTTCAATTCCAGAGACAACCACCCGACATGCCAAATCGG
AGGAGTCGAATCCATCGAAAAATGAGGAGCAATATTTAAGCAACAAAGTC
ATGAACCATGTAGACGAGTGTGTAGAACCAGTACCAACCACGCAAGATCA
AGTAGGTATGACGGAGGATGAGATTTATGCTGAAGAGGGGGTGCAACCGT
CACCGAGAACTTCCTCGGTAACCAGTCAACAAACTGGTAAATCGACTGAA
TGTAAAAGTAAAACTGAAGCGTATATGATAGATCGTGTTGCAAAAGAGGT
ATTCGGTGCGATGAAAAGAAGAGCAAATGAAATGACAGGATCACAAGCCG
CCAATGATGAAGTCAACGCAAACGTCGATGATGGAGAGTTCTCACGTGAG
ATTGGCATCGATATCGTCATTGCTTACAAATTGACCGAGTGGCCATCAAT
CGCCACCGGATTTTTCCAGAGAACGGAACGTCAATGGCCGTCTGTTGAGA
CAACTGAAAAATTGAAGATGAGCTCAGTCTTTGTTGTGGTTAAACATCCA
AAGACAGATTTAGCAGAAGAAATGATTCCATACTGTTTCCGTTACTCTTT
TTCACACGGTGAGAAAATCCTTTGTCAAGACATGAATGAGATCCAGTCAA
AATGTTATCGACTGATGAAACTTTTTCACAAGTCCGTGCTCAAGAAAACG
TGCGAAGGGAAGACGTCCTTTTCTTCGTACCACGTAAAGACAGCAATTTT
CTGGGTAAGTGAGATGAACGGTGAGGAGATTTTCCAAACAGAGAATTTAG
AAATCTGTATCACACTCATCATATCGTTTCTGTTGACCGCTGTCCAAGAG
AGACATTTGAAACACTTCTTCATCGAGCAAGCTAACCTCTTCCAATATTT
CAGTAATAAAGAGTTCGAAGAACTAGAGATCAAATTGAATGAAGCCATGA
CCAATTTAGAGGAAGCCTTTGAAAGCGTGGAATGTGAGTTCATTGCAATC
TCAGAGGATGTAGAAACCAACACCGTGGTACTATCAGCCGGAGAACAACC
AGAAACGAAGGGAAATGCGGCGAAGGATGACCGATATTTCACTTTGTACA
CACGTTGGTCAGAAACGTACGACCGATTGACAACACATCTAGCACAAGAA
GTACACGATCCAACCTCTGATAAAGAGGGAAATGCGAAATTTCCAATGGA
GCTGAAACAATTATTCAGAGACAGTAAGATGACTTATGAGAGCATGTTGA
ATACATTTGCAACCATCAAAACGAGCATGTACACAAAACACAGCTTGAAT
CCCGCAGACGCGCGACGTCCCATCGAAGATGTAGTCATGGAGGATATTCA
ATCCATGAGGTCCATTTTGAAATACGTCCTGAAGATTCCGAACATCGATC
AAATGGCAACCTCCGAAGAGGCGCTAGAGCAGCAAATGTGGAATGACATA
CAAAGTAACGATGGAGATTTGATGAACTACATTGCAGGATCCATGCCTGA
TGGAGATCAATTGCTTAATTCCCTTCTCGGCGCCTTCAAGTGAATGGAAG
AAGTTTGTGATCGTTTATTGGAGCGAATACAGAGCGACCCCAACGTTCGT
GGATACAAAGAATCTCACGTTTTATTGGCGAACCTTTGTGAACTGTTCAA
CGAAAGATTTGAAGAGACGGAGCTCATGATTACAGGGAGCACCATGGAGA
AAGGGAAGGTGGTGTGGGCCAATGATGTGGGAGATTTGGATATCTTGGTA
TTCAACAAAATGCCTCAACATCTCATCGATACCCAACAAGTGAAAGACGT
CCCTCGGCATCCTGGCTTCGTTTACATCATGCGGGACGGTGAACACATCA
CCACCAAGATGCTTAAAGATGGTACACCAAAGGTGATGGACGAGACCATC
ATGCCCATGCTGCAGATCGCTTCCATTGAAGGGAAAGGTCTCTTCAAAGT
TGTGCACGATCCCAACGGGCCTGCTACAAAGATCATTCTGCTCAGTAATC
TACAATCTTTGAATGAACAATGGAAAAACATGGGTGATATTAATTACAAC
GAAATAGCACTCTTTCAGAACTTCGTTCGCGTTGGATTGCCTAGTGGCCC
AAACAGACAAAACCTTACGAGCGAACAAGAGGAGGAACGGATCGAGAAGG
CTACTTCAGCGTTGAAAGAGATATCCAAGCGAGAACGTAAAGATATATTT
GAATTGAAAGATCTTTTAGTCAATGTTGTACCCCCAATTTTGGGGATGGA
AAGTTTAAGTGAAATGTCGACATCTGCACCGAAGAGCACAAAAGAAGATT
TGAATGGAAGTAATGAAGCAGAAACCAAAGATGTCGAATCGACTAAAACA
AACCCGCCTACCATCATCCACTATGAAGAGAAATTAGATATGGCGTCTTC
AATTCCAGAGACAACCACCCGACATGCCAAATCGGAGGAGTCGAATCCAT
CGAAAAATGAGGAGCAATATTTAAGCAACAAAGTCATGAACCATGTAGAC
GAGTGTGTAGAACCAGTACCAACCACGCAAGATCAAGTAGGTATGACGGA
GGATGAGATTTATGCTGAAGAGGGGGTGCAACCGTCACCGAGAACTTCCT
CGGTAACCAGTCAACAAACTGGTAAATCGACTGAATGTAAAAGTAAAACT
GAAGCGTATATGATAGATCGTGTTGCAAAAGAGGTATTCGGTGCGATGAA
AAGAAGAGCAAATGAAATGACAGGATCACAAGCCGCCAATGATGAAGTCA
ACGCAAACGTCGATGATGGAGAGTTCTCACGTGAGATTGGCATCGATATC
GTCATTGCTTACAAATTGACCGAGTGGCCATCAATCGCCACCGGATTTTT
CCAGAGAACGGAACGTCAATGGCCGTCTGTTGAGACAACTGAAAAATTGA
AGATGAGCTCAGTCTTTGTTGTGGTTAAACATCCAAAGACAGATTTAGCA
GAAGAAATGATTCCATACTGTTTCCGTTACTCTTTTTCACACGGTGAGAA
AATCCTTTGTCAAGACATGAATGAGATCCAGTCAAAATGTTATCGACTGA
TGAAACTTTTTCACAAGTCCGTGCTCAAGAAAACGTGCGAAGGGAAGACG
TCCTTTTCTTCGTACCACGTAAAGACAGCAATTTTCTGGGTAAGTGAGAT
GAACGGTGAGGAGATTTTCCAAACAGAGAATTTAGAAATCTGTATCACAC
TCATCATATCGTTTCTGTTGACCGCTGTCCAAGAGAGACATTTGAAACAC
TTCTTCATCGAGCAAGCTAACCTCTTCCAATATTTCAGTAATAAAGAGTT
CGAAGAACTAGAGATCAAATTGAATGAAGCCATGACCAATTTAGAGGAAG
CCTTTGAAAGCGTGGAATGTGAGTTCATTGCAATCTCAGAGGATGTAGAA
ACCAACACCGTGGTACTATCAGCCGGAGAACAACCAGAAACGAAGGGAAA
TGCGGCGAAGGATGACCGATATTTCACTTTGTACACACGTTGGTCAGAAA
CGTACGACCGATTGACAACACATCTAGCACAAGAAGTACACGATCCAACC
TCTGATAAAGAGGGAAATGCGAAATTTCCAATGGAGCTGAAACAATTATT
CAGAGACAGTAAGATGACTTATGAGAGCATGTTGAATACATTTGCAACCA
TCAAAACGAGCATGTACACAAAACACAGCTTGAATCCCGCAGACGCGCGA
CGTCCCATCGAAGATGTAGTCATGGAGGATATTCAATCCATGAGGTCCAT
TTTGAAATACGTCCTGAAGATTCCGAACATCGATCAAATGGCAACCTCCG
AAGAGGCGCTAGAGCAGCAAATGTGGAATGACATACAAAGTAACGATGGA
GATTTGATGAACTACATTGCAGGATCCATGCCTGATGGAGATCAATTGCT
TAATTCCCTTCTCGGCGCCTTCAAGTGAATGGAAGAAGTTTGTGATCGTT
TATTGGAGCGAATACAGAGCGACCCCAACGTTCGTGGATACAAAGAATCT
CACGTTTTATTGGCGAACCTTTGTGAACTGTTCAACGAAAGATTTGAAGA
GACGGAGCTCATGATTACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:500251..503830 - |
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