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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:121190..125497- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17592.1.p2 ID=MSTRG.17592.1.p2|Name=MSTRG.17592.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4308bp|location=Sequence derived from alignment at sc0000179_pilon:121190..125497- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATCTCTGAATAAAAAAGAATACTTATTTGGGTCAGGAAAATAGACTA
TCATCGCGCCGCTTTTCAAAACAAAAACAAATTTGAGATCTAAAAAACAG
AATCAGAAATAGAGAATATTGAGAAAATGGAGCCTAAAGCGAAGTGGAGA
AGAACTGACATAAGAAAGTGCAATTGCCCAGCTTTGACAAAAGAACATGT
TCATTGTCCTTGTATTGGATGCCAACATACTGCAGTAAGTAGAAGAACGG
AATTAAGGCATTGGCAACAACATGAGAAAATATTTCAAGATGATCATGAC
CAAGACGCGCAGATTGTTGAAACCGACAATGATGTTGATGATAGTGACAG
TGACAATTTATTAAATAAGACTGCATCTGCCAACTCCTCTCCCAGCAGTG
TTATTAGCAGCAGTGTCTCAACAGCATCAGCCGAGAGTTTCAGTATAAAC
CACCAGCTGCAAGGCGATGATGAGCCCCATCATAAAACCTCCAGTAGTAG
TATTATTAGTGATGGTGATGTTGATAATAATGGACCTAATAATGATGAAA
ATGACCACAGTAATCAAGACTTTGACCCAGAAACGGAAATAGATGCAAAT
GATGGTGATAACGATAACATGTATGTATAAAGAGGCGGTGGGCCATATAT
TTAAAAATTGTTCTGTTTTTTAATAAAAATACTTGTGCACATTTTAATAA
TGTTCTCTAAGATTTCATTGAAGAAGTTGATTTTCTTCTTATTCATTGGT
ACTTCATCTTCATTTTCCAATATTTTTTGAGTTTTTTTTTTTATGATGAT
ATTGGGCCATTCCAGAAAATTTTTGTTGCCCCCCCCCTGCGTCGGACAAC
ATGCATTTTTAATTCTTTTATAGCCTCAAAAATAATTTTTCTTTTCCAGT
GGTGGTCGGAAATTCCCATAAAAATCCATGTACTTTTGCAAAATGCATCG
GAAATACCACTCTTTTTTTGCCTTTTTTAATTCGATTGCCTTGGAAATTC
ATACATTTTCTTCTCTCGCCTTGGAAATTTCGAATTTTGGTGAAAACTTT
TGCCCTCGGAAATCCTGTGTTGTCCGCCCCCCCCCCCTATTACAGACAAA
TTCTGGAATGGTCCATTCCACTCTTGTTTATTTTTTCAACAAGCACAAAA
CTGCTATCTAATTCGAATTATATGTCAAAAGTTTTTTAATTAATGTTAAC
GTCATATAATTGATCCGTCTTTTACAAAGGTACAAGATAATTTATCTCGT
TTGTACAGACTGTACTTCACCACTTTCTCCCAAACGAATTTTTTTGATTT
CATTTTTTAGAAATGGAATGATTTTGAAATATTTGATCTTGATCATGGAC
TTAGCAATGAAGATGAATGCCTCTAATGCTCAGACAGAAGACCTGCTTGC
TTTTGTTAACCAAATGTTTGGAGATTTCAGCCCAGATTTACAGTCAAAAT
AGCCACTCTCATATTATAAAGCTATACATGCAATGAAATCCTCTAGTTTA
TATTCTGATCCAGTTGAACACGCTATATGTTTCAATGAAAAGGAGCACCA
GATACATTGGTACCAGATGAATCCAGATGAATCCTGTCCAGATTGTGATG
AAACTCCACCTATTAAACGTTACTATCTCCCATTAAAAGAAAAATTAATG
CGCTGGTTTCAATCTGAAGAAATGTGCACAGCCATGCTTGGTCATTGGAA
GAATCGAGACAGGTGGCTTGGAAAGGAAGGGCCAACTTTTCCCCTAAAAG
AGATATGGGACGGAACAAGGTTCAAAGAGATCCAGTGTTTTTTTGATCCA
CTGTCAAAGTGGCCTTTGCCTCACACTTGTAAAAAATGTGAGCATAAAAC
TATTCTCCAGAATGTCGTGGATGAGGATGAGGTTGAAGTAACGTGTCCTA
ACTGTGGATTGTTTGCTGTCATTCAACCAGAATTTTGTCATGGAGATCCT
CGTAACATTGTTTTTATTGGACACTGGGATGGCTGGCAACCAAAGGTTGG
AAGAAGAAGGGCCAAAAGCTCTGGTGAGAATTGATATTTTAACTTATGCT
TAGCATATGCTTTTAAATGTTTCTCATATCCAAGCCTAGATATGATTTTA
GGTGCAATGTTTATAAAGAAAAAAGCACTTAATTTGCAGATTTTTGTTGT
ATTTGTCTAATTCATTTGATCCAGAATTTATCTCTCCTTAACCCTATTTT
TATCAGGGGGGGGGGTGTTTTCCACCAGGCTTGCACTCTTTTGCTAATAG
CTCACTGAAAAAAAAATTTAACACTCTGAAAAATTTTAACTTTTAATATA
ATTCTATTAGCACCATGTATACCAAGTTTTACAATTATACACCGACCAGA
TCAGGTTTTATGTCTTTTTTGTGCACGCATATCATAAAATCCAGCTAAAA
CCCTGTAAAATCCCAAAATCTTAAATTTAGCATAACTTTTGATCTAGGCA
TCCAACTGACTTCAAATTTTGACAGGTTTTAGGTATCAATAATATATTTT
AAAAAATATTTAAAATTTTTTCAAAAACTGCTGACGTCATCACAAATGAC
GTCATTGTTTTTTGAAAAGATTTACTCATTTTCTGCATAGATTTTAAACC
TCAATTTTATTAGTATGTTAAAAACCGGCAAACATGTTAAAGATATTCGT
TTTGGCTTTTAGAAATTCAAAACAGAATGAAAAAATCTTCATTCGTTCAA
CTTTAATTGCTATTTTATTGAATAGTTCTTTTTCATTGGTCAGCGATAAT
TGTGAAACTTTGTGATGACGTCATCACCTTTATGATGACGTCATCACCTT
TATAATGACGTCATCACCTTTATAATGACGTCATCAACCTAAATTTTTTT
CTATGAACTCCTTTTATGGTAGAGAACATCTCTGCCAAATTTCAAGTCCA
TATCTTTTCTAGATCAAAAGTTATGCAATGCTGGTGGAAAACACCCCCCC
CCCCTTGAGAATACAAAATCCGAAAAAGCCTGATAATAATAGGGTTAAAT
GATGAATATTAATATTGATGAATTTTCAAAAATCTAATAATTCAAATACT
TTCTTCCTATTAAATTTCTACAAAAGGGTTAAGTTAAACACTTCTTCTGA
TTTGGTCTCCCTAATCCTCTGATTAGTATTGAATAAAAAAGTCGTTCTTT
TTTCGTTTCTTTTTAAGGAACTATTGATTTGACAATCGCAAACATTGAAA
AAGAAGAGAGATGTAAAACAAAACACATGTATGTGTCACCTTTTGTGCCT
GAGCACAAACTACCCAAGAAACAGCCACTTGTCCTGGATCCTTTTCTACA
GCCAATATTGGATGAACTTGAAGACTTGTTCATAAATGGTTAGTTTAAAA
TTCTGAATATTCGCCATAAAACTGTAATTTTTACCCTGACTATTATTTTT
TTTGACAGTGTCCTTTACAATAAACTTACTGTTACTGTAAACACTTTAAT
TTTTCTTGAATAATACAAACCAGAAGAAAAGGTTCAAAATTAGAGAAATT
TAAAACATAAGTATTTTTAATGAATGATTGCAGGTTAGGTTACAATTCGA
AACCCTTTTTTATTTAGGTATTGAGATTATGTATCCTTTTGAAGTATATG
ATAATGTTGTGCCACCAGGAAGGTGTGTCATTAGATGCATGCTGTTATGT
TGGACTGGAGATTATCCAGCCCAGTGTCAGGTTGGAAAATTCTCCAAGAT
GGGAATTTCTGGTTGCACAGTTGATCATTGTAAAGGTAAAAGATTTTTAT
AATTTTTTTTTCATGCCTCGTCAAGATTATGAAACTATATTGGAACTGGA
GAGCTCTGTAATTTTAGGTTACTAAAATAATAGTTTTTAATTATTATTTT
TTTCAATTTTCATTTAACGAGGCGTTGCTATTATTAACCAAATTTGCAAA
TTTTGAACTGTTTAATTTTATTTTTACTTCATTCTATTTTAGGAATTTCT
CTTACTGATGGTGGGACTACCAAGTATTATGTAAACAATCGGGAACATCA
TACAAACCCATGGCCAAAGCGAGAAATAACCACTGAAATCAAAGTAATGG
AAAGAGTTGAATTTCAACCAAGTACCCAAGCAAAATTACGATTAGTTACA
ACCACTGGTTATTCTGGCATGACACTTTTAACACGAATGACAAACTTGTA
TGGCTTTAATCCCTTCACTGACATGGTTCACGACAGCATGCATTTAGTAC
TTCTCAACCTATGTCGAAAGCTGTTTAGTAGAATATTTGGAGATGAGCGT
TTTATCCCAGATACATCAGAATTCAATCAAAAACTTGTTGACTTTCCATT
CACTTCAG Coding sequence (CDS) from alignment at sc0000179_pilon:121190..125497- >MSTRG.17592.1.p2 ID=MSTRG.17592.1.p2|Name=MSTRG.17592.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000179_pilon:121190..125497- (Clytia hemisphaerica_ch_hm2_pilon)
AAATGGAATGATTTTGAAATATTTGATCTTGATCATGGACTTAGCAATGA
AGATGAATGCCTCTAATGCTCAGACAGAAGACCTGCTTGCTTTTGTTAAC
CAAATGTTTGGAGATTTCAGCCCAGATTTACAGTCAAAATAGATGGAGCC
TAAAGCGAAGTGGAGAAGAACTGACATAAGAAAGTGCAATTGCCCAGCTT
TGACAAAAGAACATGTTCATTGTCCTTGTATTGGATGCCAACATACTGCA
GTAAGTAGAAGAACGGAATTAAGGCATTGGCAACAACATGAGAAAATATT
TCAAGATGATCATGACCAAGACGCGCAGATTGTTGAAACCGACAATGATG
TTGATGATAGTGACAGTGACAATTTATTAAATAAGACTGCATCTGCCAAC
TCCTCTCCCAGCAGTGTTATTAGCAGCAGTGTCTCAACAGCATCAGCCGA
GAGTTTCAGTATAAACCACCAGCTGCAAGGCGATGATGAGCCCCATCATA
AAACCTCCAGTAGTAGTATTATTAGTGATGGTGATGTTGATAATAATGGA
CCTAATAATGATGAAAATGACCACAGTAATCAAGACTTTGACCCAGAAAC
GGAAATAGATGCAAATGATGGTGATAACGATAACATAAATGGAATGATTT
TGAAATATTTGATCTTGATCATGGACTTAGCAATGAAGATGAATGCCTCT
AATGCTCAGACAGAAGACCTGCTTGCTTTTGTTAACCAAATGTTTGGAGA
TTTCAGCCCAGATTTACAGTCAAAATAGATGGAGCCTAAAGCGAAGTGGA
GAAGAACTGACATAAGAAAGTGCAATTGCCCAGCTTTGACAAAAGAACAT
GTTCATTGTCCTTGTATTGGATGCCAACATACTGCAGTAAGTAGAAGAAC
GGAATTAAGGCATTGGCAACAACATGAGAAAATATTTCAAGATGATCATG
ACCAAGACGCGCAGATTGTTGAAACCGACAATGATGTTGATGATAGTGAC
AGTGACAATTTATTAAATAAGACTGCATCTGCCAACTCCTCTCCCAGCAG
TGTTATTAGCAGCAGTGTCTCAACAGCATCAGCCGAGAGTTTCAGTATAA
ACCACCAGCTGCAAGGCGATGATGAGCCCCATCATAAAACCTCCAGTAGT
AGTATTATTAGTGATGGTGATGTTGATAATAATGGACCTAATAATGATGA
AAATGACCACAGTAATCAAGACTTTGACCCAGAAACGGAAATAGATGCAA
ATGATGGTGATAACGATAACAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:121190..125497 - |
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