MSTRG.17586.1.p1 (mRNA) -

Overview
NameMSTRG.17586.1.p1
Unique NameMSTRG.17586.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000179_pilon:2082..3608+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17586.1.p1 ID=MSTRG.17586.1.p1|Name=MSTRG.17586.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1527bp|location=Sequence derived from alignment at sc0000179_pilon:2082..3608+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACCTATTCGTAACCACACAACAGGTGGTCTTTTGTGTGAGCAAGAAAA
TCCCGATGACCCATGTCCAGATGAAATTGGACAAAAGATCGTGCCAATTT
ATATGGCAATTTACATGTTGATGACGAATATATTATTGTTGAATCTTCTC
ATCGCCATTTTCAAGTAAGTTAGattttaagaatattcttaAACAAAAGT
TCCAATATGTATTATCATAAATAACTTTACAACACGACTCACGAGAATTT
AGAATGATTTAATCTCGAGATATTACAcgtttattataagaacaactttt
ggatgttcttcactttttgagttttcagcataaaaaattgtttttttaag
ttctaactttcaccatttttgaagtatttcagtccattttcctaagaaat
catgTGTTTTAGAGACTGCAAAGCcattaaatgttcttaacttgttctta
atattttgttcATAGCAGCAATGAATTTTTTagagtttgttcttataaaa
gcaaccAGTACTCAACTGCTTGAGGACACAATACAAAACAAGAGAATTTA
TCATTTATAAGACGTCATACTCTTTTTAGTCCCATGTCtaaaaaaataaa
ctatattgaaATTTGTTTGCCCCATTTAAACTGGAGAAACAATTCGAGGC
CAAATTCGAGTTTGGTTCTCTGTACGTATTCCAGTTACTGGCACttggcg
aaataagagatttccaatcctggaaatatcttgaaaatatgatatttcca
tataattttgtaaatatggaagtatgacttttctatatttccaaagttgt
aGAAATaccatatttcatgatatttccaaatctgaaatatcgtattttca
aaatatttccaacttttggaaatatcatatttccaaaaattggaaatatc
ttgaaaatatgatgtttcaatgaatttcagaattggacatatcatgaaat
atgatatttccacaactttggaattatagaaaagtcatatttccatagtT
ACAAAAGCATATGgaattatcatattttcaagatatttccaggattagaa
atctcttatttcgcccagtttGGTTTGTCCAGAAAACATATTTCATCAAA
CTCTCTTCTTGAGATTTTATTATGTCTTTCAATTATTGCTCCAATGATGA
GAATCTTTACCAACAAACTCCATAGGCTGCTTGCATCAATGAACACTTAC
GGTTTTATAtaagtctgcgattcagactacaaaCTCCACTTCTAATTAAA
TAGCTCGACATTTTACTCGATGTTTCTTTATTTCATATTTGCCTCATCGG
tgacttttcttttcttttctagtaACACTTACGAAAAGGTGCAAGAGAAT
TCGGATCGTTTGTGGAAGTTTAAAcgttatgacgtcatcaatgaatACAA
TGACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGCTCACATTTGGT
TTTTCgtatttttcttgttccgatGTTGTTGTaaaggaacaaaacaaaac
aaatttggaACACTCAGTAAgctgttt

Coding sequence (CDS) from alignment at sc0000179_pilon:2082..3608+

>MSTRG.17586.1.p1 ID=MSTRG.17586.1.p1|Name=MSTRG.17586.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=738bp|location=Sequence derived from alignment at sc0000179_pilon:2082..3608+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACCTATTCGTAACCACACAACAGGTGGTCTTTTGTGTGAGCAAGAAAA
TCCCGATGACCCATGTCCAGATGAAATTGGACAAAAGATCGTGCCAATTT
ATATGGCAATTTACATGTTGATGACGAATATATTATTGTTGAATCTTCTC
ATCGCCATTTTCAAtaACACTTACGAAAAGGTGCAAGAGAATTCGGATCG
TTTGTGGAAGTTTAAAcgttatgacgtcatcaatgaatACAATGACCGCC
CATCATTTTGTCCGCCCTTCATTGTGTTGGCTCACATTTGGTTTTTCgta
tttttcttgttccgatGTTGTTGTaaaggaacaaaacaaaacaaatttgg
aACACTCAGTAAgctgtttGAACCTATTCGTAACCACACAACAGGTGGTC
TTTTGTGTGAGCAAGAAAATCCCGATGACCCATGTCCAGATGAAATTGGA
CAAAAGATCGTGCCAATTTATATGGCAATTTACATGTTGATGACGAATAT
ATTATTGTTGAATCTTCTCATCGCCATTTTCAAtaACACTTACGAAAAGG
TGCAAGAGAATTCGGATCGTTTGTGGAAGTTTAAAcgttatgacgtcatc
aatgaatACAATGACCGCCCATCATTTTGTCCGCCCTTCATTGTGTTGGC
TCACATTTGGTTTTTCgtatttttcttgttccgatGTTGTTGTaaaggaa
caaaacaaaacaaatttggaACACTCAGTAAgctgttt
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17586MSTRG.17586Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17586.1.p1.exon1MSTRG.17586.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17586.1.p1.exon2MSTRG.17586.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17586.1.p1MSTRG.17586.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000179_pilongenomesc0000179_pilon:2082..3608 +