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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000175_pilon:164539..171200+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17427.4.p2 ID=MSTRG.17427.4.p2|Name=MSTRG.17427.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6662bp|location=Sequence derived from alignment at sc0000175_pilon:164539..171200+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTAActttgtcaaaacaaaaaagaagaagaagtcaTGGTTCGAAAGATC
AAGATCCTGCCAAGAATATTGGGATTTGCTGAGGAAGAATATTTGGAGGA
CAATGCAGGCTAGGGAAGTTTTGGATGAACATTTGTAATGTGTGTTGTGA
TCGACTTGGTGATCTTTATTGCATGGATTGTCACAAATCATTTTGTCATG
TATGTGACGATGTCTTCCACTTGGCAAATCCATTACATGATAGATTGTCC
TCTGGCAGGTACCTAGATGTTCTGGAGTGTTTGGATGAGAAGAAAGAAAT
AATACCAACAAGTATTTTTCAAATAGTCAGTTATAATTAGAAAATGTATA
ATGCAATACATCTAACAGCTTAATATACACACTTTAATCATAGTGCATAG
AGCCttctcaaaatcacaaaaagggAGGGAACAtctgttaatttttttca
ttaacttTTAGTTCGCTATCCACCACTTAAATGTGTTTGTTCAGTTTGTG
GCAGTAAGGAGGTCACCAAGATCGCTACAGATGAGTATTGCATTGTCGTT
ACATTGAAAGGTAAGCAATttgatttagaaatttcaaagtcaacaATTAT
AGGAATCTCCTCTTAAAATTGTAATTGTTACCAAATTTATTCACTTACAA
GTGCCTTAACTCAATTTCTGATGATTTTTGTAGCGTACGTTTTTATTGGT
TTTACAAAACACTTTTGGTCccattgtttttattattctaTTGCCCAATa
tatcataattttttaatCTTATAAATGTAAATGGGGCTGCTCGAATAGTT
GCTAGCCTTATCAaaggtttttcttgtttttattgattatcTGACTATAA
TACCAAGGCGCAATTGTTAGTTATTTGGAATATCGTTGTAAATTGTTTTA
ATTCCAAACTACTAGTACCAAACTATACAGAAGCAGATCTAGCTAACATT
TTGCAATCGTTTTTTAGAAAGCTACCATCAATCCGACTAATTTTGCGATG
GCGTTCCGAGAATGGTGTTTGTGGTTGGATCAAAAAGACCTTATTCAATT
CAAAGATTGGATGGAATGTCCAGCATATCATCTTCGCCCCCATAGTTCAC
ATGTGGATGGAAACGTAAAGCTTTATCGTTACAAAAGGGGAATGTAAGTG
AATAAAGAAGGATGGAAAATTGTTAGCAATAATCTTAGGTTAACAAGGAT
GGAGGTTAAACATATGCACTTGAAAACTATAAATactaaatgttcttatt
aagAATTTCGAAAAGTTCTTCCACACCCTTTTACTCAGAACACTTAGTAT
TAACTGCATTttccatttgaaaaatggacatCCACGATAGACATTATTaa
gtactaactgcttgaccccctgAAAAAGATGCAACtcaatttcatttata
tttttttagaagGCAGCGACAATCATTCTATGACAGAAGATATTCATTAT
TCCTAATGAATCAGTTTCTAAATTTATTGATCGTTTGTACAAAAATCAAG
GTATTATAATTTTAAGAATGTTGGtctatttattaattttttatctaatc
AATACCATTatcataaataataagaagctcaaaatagcaaaaaattaaga
aacattgaggaaACGTAGTCAGGCTAAAATTCTAAATCTCtccattttca
taatttttttgctttttaaactATTAAAAGCAATTAATAAACTTCGCCTG
AGTAACAAGCTTTGGAACCTAAAAATAGATTAACTGAAAGTCACTGGGTT
CCAAAATTAATTTCACAGAAATGAACAAAATActtttagattttaagaaa
catctaagaaacgtTTCAGGAAAAAAGATGAATGCTTAAAAACATCAAGC
CTGCTCAGCAAAACGTGTTTCCTTAAAAAAGCGTAATGCAAATTTGTGTT
GTATTGCTTTTTAGGATAATAATGACGCGATTTGTGGTGGGACATGGACG
GCAGCACAAAATGTAACAAGAAAGATGGCAAAGCTCGATGAGACAGGGTT
AGAGGTGGCAACTTGTCGTCGTGTAATGGCAAAAAAGCCATTAATATGTT
CAGAGGCGAAGTATTTGGCTATCCCTATTTTTTGATCAAAGGAATCTATG
ATTCCAAATGGCACTAGATTTTGTTTTGCAGATGTTATGTGCAAGCTTTG
GCCGTTCATGGTTCGTGATGATGCTTCGATTAAGGAGTCAATCAAGCCAG
CGTTATCAATAATGCACGCTAAGGGTCATTCTATAGAATGCCAGGTAATT
AATTCGTCAATTTATTTGTGGATGTACTTTGACTTCTCACGCCCCCCTCA
TTGGACCTTGAATCAACTTAAAGTACTACAGTGAAGTAATTTTCTGTAAC
CATCCCCCATCTAGGTGGCTGTAGATTGGAGCGAAACTGAGCGAAACGAT
AAGACAAGTATTATGTTGCAAAATTTGAAATACTGTTTTTTTATATTTAT
GCCTTAATTCTTAGGTTGTTTGGAGTGGTGAATGGTTGGAAGGCACCGGA
CGTTCAACAGGAGAGGAAACAGAGCAATTGTTCAGTTATCTTTCTCGGTT
TGGAAATAGTACAAAGTATCAATTACCTGAAAGTAAATATTGTTCATTAA
GTCAAATATATTTAATTCAAGTACGTTTCTCCCTTATGTCACTAATAGTA
ATACAGTTGTTCTTTTCCTTTATTTATTTCTGATTTAATTTTTCAGGAAG
AGAAGAAACACTAACAGAAGCAGTTCTTCACTGGAACAAATCCAAAATCA
AAAAACTTGTACCAGATTTGGTCAAGAGATATTACAAGGTAACAAGATAC
GGTAATTTGCTACGTTGAAAGGTTTTTGCATGACATGATACTTCATGTGA
GAGATGATTGAGCGTATTTATTTGTACGTCAATTGCCAGAAGGACTCAGT
CTTTTCCTAATCTATAATTTCTTTGGTTTtagaataaagaaaatttaaaa
atgattggTGACTTGCCAGACAAACATCCAACTAAAATCATAATGCAATG
GAAGgatgaaattcaaaaagaagcATTAGGTAACAGTGTTGATATTAGGA
TTTGGCGCGTTGTCCTCAATTGAAGACCTTTGCTCAATATGTATTATATA
TCagtataaattataaaaatcgCTACAAATGTACCGTCCAAGCAGTTAGT
CCAAAACACCATGCCCGTTAGTACATCTTTTGCAGTTTCTACTGGTTTTT
ACAGGCTTTCACTGCACTTGGCTTCACTCTGCTTTACTTCTaccttttgt
tcttttgttgtaACTTTTTCTAGGTTTGAGAAGTAGAGTGGTTCGTCAAC
CTTCCGACGCTGAAAAGCTTCTTCTTCTGGTGGAAAAGCTTCACCTTCCA
CCTGACTATCACATAGTTGTAGCAGATTATCATTCCCCAAGACAATGGAT
TATGGTAAAAGTTATCGGGTTGATAAGCAGGATCAATTACAAGAACTTGA
TTGACTTACCAAAGAGATTAAAGTCGAAGATTTACTGGTAcgacttcttt
atttttgttttattaattGATGCTTAAGGGAGGGTTGAATTAGGGCTGTT
AGTCAAATAGGGGGTCAAATTGCTAATTACTGTAGCTTGATTTGAAGAAA
ACTAAGATTTGAGCTCtttttttGAAGAAGTTAACAACAATTCGGgctaa
acatttttaaaaagagattgctatgaaaaAttgaaattgttgtGAATTAA
ACATTCGCCAGCTTTTCCTAACAAACAAATTTTTACTGAatttcaaaagt
ccaaaaatagACATTTCCAATATGTAACATCCCTAGCGCTCTTCTAAGTC
AGCTAAATGAAAAGATCTTCTTAGTTTCTTAAAAATTCTTGTTTAGAATG
CACACACAAGCCTTCCCAAGGGATTTTATTGCCTTTAATCAAAAAGGCAA
TTGAAAagtccaaaattgaaaaaacctTGTTGAATGCTCAAGTTGGAGAG
AAAGGTATTTTGCCtctgttgtttattttttttcatttagtaaaCAAATT
ACATGCAATTTAAagattgttattatttttgcaaaatcttaTTTACACAT
GCATCCTATGAATGTTAGAACATTTTTGTATTACATTCTAGGAttttttt
GTTGGTATTGATTCTATTTCAGATACaagtaaaaaaaggaaaacagtCCG
ATCAAAACTGGCCGCTCTAAAGAAAGCAGAAATTGATATGTTTGGTGATT
ATTTAATGTTGACCGGAGAAACAAATAATAAGGAAATGCATAATCATCTC
GGCAAAGGAATTTTACCTTGGTTAGACGATAGCTCCTATTCTGAAGGTAA
TTAGGAGATATTTATTCTTTTTCAAGACAGCCTATTACGTGTTGTTTTCT
CTAGATCTCATTATGGAAAAGTTGGCTTTGTTGAAGTTCAGATTATTTAA
AGGagtctcttttttcttttttttcagctgTTAAACGCAGGATAATTGtg
gaaaaatatcttaaaaggCAACGTTACATTGAAGAAAAGCAAATTTTATT
TAGCGAAATGAGAAATGCTATTAATTTCATGCAAGGAAAGATCCAAAAAT
TGATGGAAGAATCAAAGGAAACAAGTAAGAAATAATTAAAGATGTATTTA
CAGCTTTGAGGCTTTACATATTCGGTTTTACAGATTTGAAGCTTTAATTT
GATTATGTAGCACGTGAAAGCCTGTTTCCGAGAAGTTTTGGATTGTAAAC
TCGAAACCAGTGCTTGTTTCTGAAACAACATCAACAGAAATATGGAAAGA
CAAAAGATAGAATTTACAATTGTAAAAATAATGATAACAATAATATACTT
CTAAAACTACACTATCCATCCTCTCTTCAATGATTTATCATCATTGTTTT
TACGTTTGAATATTTAGGAGTGAAACGACTAAcgttattctttatttttt
attttttagtccCAAATGTAGTAGCAAACTTAAAAGAGGAATCAGGCCAA
GATCTTTTTACAGTAAGTCTTCATAGTTTGTGTTGAAAGAAAGCACAACG
AGGAAGGTGCACGGAgaaaatagaaacttttttaattgGGAAGGCAAAAA
AGGTGTAGGTAGAATTTTGAAAGAGATTGGGTAAGACAGATTctttccga
aaatttttacaattttgattcTAGTTAGCAACGTTCTATGGGAAAAGGGT
TCAAAAATAGAGAGCAGTACTTACACTGCCTCACTGCTAATCAGTTAGAA
GACTTTGAGTTACTTATGTTCTGATATGAAGGTCTTGCATTCCGGCGGca
tgaattttatattttgatacattaaagcttcaaaactcaatttattttta
tttacagaTCAAATCAAGACAAGGATTGAAGTCCCTAAAGGAGCAAGGTG
TCGAATACTACCGGAGGGAGTTTGAAAGCGCCATCCGAACATTTTTGCCA
ATCATCGAACCCAACGGTGTTCACAATTTTGACAGCCTGTTGGACTTTGA
TACGCCAGTAATCGAACAAACCGTTGTTAGCGATACAGACAATCCTGATT
CTGATGACTTTGACGATTTTAATGGTGAAAGAGATATTGATTGTGAACTT
TCTGAtcctgaaaatgaagaaaatagcGATGACGAGGAAAGTGAAGGGCC
GACGATATGAAAActtaatttaaaaaagaattcttaCTTAGACTaaaaaa
acagaaacttttattttatttcgcggattttatatattatattggatttt
GCTAGTGTATTTCAATCATGCGTGTGAAGTTACCCTCTTCGATCAAAATT
GATGTAATGCTCTCAGGGTGATTTTTGCTCAGAAATACACGGGTTTTAAA
TTAGAGAAATCGATGTTTTCATGTAAAAAGTCAATGAGAATTTCAAGAAA
CCCAAAAACGgctatttgaaaaattactttttccaTCGTGctttaatttg
ttcattgttGTGAACGATAGATCTTACTTTATCAGACCCTTcggattttc
ttgaaattttcagcgACTTTTTCTATACAAACATAGATTTCTCTGATTCG
GAACCCGTGTATTGTATGTAACCTGGTATAAATTAGTCAAATAACTAGTA
GCATACTTCACAGACATGCtaataagtttaaaaaatgtaaataaaatgaa
aaatacaatcaAACTTTTCTCGGGGATAgaaataacattttattaaaaat
cctTATTAGGCGAGGCCGATTTAATTAGTTGTTTTTCGACgcccgaccga
cccatatttttggaaaagtgaaatgaaaataaaatggaaagtgaaaatCA
CtaaagattttgatttcatgGTTCCTACatttgtttaaaagaaataagaa
aatagcattttaaattttacattAAATTATAGCTTTATTTAAATACATTG
GCCTCAAAGAACAAATttagaaaagaaagaaactcttaaaaaaactttat
tgataCTAACTCTACTAATAtttttttGCCGACCGACCCACATTTAAAAA
CTGCCACCTCTAAAACAACTAGTtgaattggtctcgccttaactaccatt
tttaattttttgtccaaaaaagcaAAACCTTTGTAAATATGTTGTTTTGA
GGGATTTCGATCtgcaattcaaattttatttgatatcTTGTAACTCAAAT
TTgttatcaaaataagaaagacaTTAGTAAGAAGTGTTTTACATAtgatt
ttgtttcaattt Coding sequence (CDS) from alignment at sc0000175_pilon:164539..171200+ >MSTRG.17427.4.p2 ID=MSTRG.17427.4.p2|Name=MSTRG.17427.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2808bp|location=Sequence derived from alignment at sc0000175_pilon:164539..171200+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGGAAGGCACCGGACGTTCAACAGGAGAGGAAACAGAGCAATTTA
TCAATTACCTGAAAGAAGAGAAGAAACACTAACAGAAGCAGTTCTTCACT
GGAACAAATCCAAAATCAAAAAACTTGTACCAGATTTGGTCAAGAGATAT
TACAAGaataaagaaaatttaaaaatgattggTGACTTGCCAGACAAACA
TCCAACTAAAATCATAATGCAATGGAAGgatgaaattcaaaaagaagcAT
TAGGTTTGAGAAGTAGAGTGGTTCGTCAACCTTCCGACGCTGAAAAGCTT
CTTCTTCTGGTGGAAAAGCTTCACCTTCCACCTGACTATCACATAGTTGT
AGCAGATTATCATTCCCCAAGACAATGGATTATGGTAAAAGTTATCGGGT
TGATAAGCAGGATCAATTACAAGAACTTGATTGACTTACCAAAGAGATTA
AAGTCGAAGATTTACTGAATGGTTGGAAGGCACCGGACGTTCAACAGGAG
AGGAAACAGAGCAATTTATCAATTACCTGAAAGAAGAGAAGAAACACTAA
CAGAAGCAGTTCTTCACTGGAACAAATCCAAAATCAAAAAACTTGTACCA
GATTTGGTCAAGAGATATTACAAGaataaagaaaatttaaaaatgattgg
TGACTTGCCAGACAAACATCCAACTAAAATCATAATGCAATGGAAGgatg
aaattcaaaaagaagcATTAGGTTTGAGAAGTAGAGTGGTTCGTCAACCT
TCCGACGCTGAAAAGCTTCTTCTTCTGGTGGAAAAGCTTCACCTTCCACC
TGACTATCACATAGTTGTAGCAGATTATCATTCCCCAAGACAATGGATTA
TGGTAAAAGTTATCGGGTTGATAAGCAGGATCAATTACAAGAACTTGATT
GACTTACCAAAGAGATTAAAGTCGAAGATTTACTGAATGGTTGGAAGGCA
CCGGACGTTCAACAGGAGAGGAAACAGAGCAATTTATCAATTACCTGAAA
GAAGAGAAGAAACACTAACAGAAGCAGTTCTTCACTGGAACAAATCCAAA
ATCAAAAAACTTGTACCAGATTTGGTCAAGAGATATTACAAGaataaaga
aaatttaaaaatgattggTGACTTGCCAGACAAACATCCAACTAAAATCA
TAATGCAATGGAAGgatgaaattcaaaaagaagcATTAGGTTTGAGAAGT
AGAGTGGTTCGTCAACCTTCCGACGCTGAAAAGCTTCTTCTTCTGGTGGA
AAAGCTTCACCTTCCACCTGACTATCACATAGTTGTAGCAGATTATCATT
CCCCAAGACAATGGATTATGGTAAAAGTTATCGGGTTGATAAGCAGGATC
AATTACAAGAACTTGATTGACTTACCAAAGAGATTAAAGTCGAAGATTTA
CTGAATGGTTGGAAGGCACCGGACGTTCAACAGGAGAGGAAACAGAGCAA
TTTATCAATTACCTGAAAGAAGAGAAGAAACACTAACAGAAGCAGTTCTT
CACTGGAACAAATCCAAAATCAAAAAACTTGTACCAGATTTGGTCAAGAG
ATATTACAAGaataaagaaaatttaaaaatgattggTGACTTGCCAGACA
AACATCCAACTAAAATCATAATGCAATGGAAGgatgaaattcaaaaagaa
gcATTAGGTTTGAGAAGTAGAGTGGTTCGTCAACCTTCCGACGCTGAAAA
GCTTCTTCTTCTGGTGGAAAAGCTTCACCTTCCACCTGACTATCACATAG
TTGTAGCAGATTATCATTCCCCAAGACAATGGATTATGGTAAAAGTTATC
GGGTTGATAAGCAGGATCAATTACAAGAACTTGATTGACTTACCAAAGAG
ATTAAAGTCGAAGATTTACTGAATGGTTGGAAGGCACCGGACGTTCAACA
GGAGAGGAAACAGAGCAATTTATCAATTACCTGAAAGAAGAGAAGAAACA
CTAACAGAAGCAGTTCTTCACTGGAACAAATCCAAAATCAAAAAACTTGT
ACCAGATTTGGTCAAGAGATATTACAAGaataaagaaaatttaaaaatga
ttggTGACTTGCCAGACAAACATCCAACTAAAATCATAATGCAATGGAAG
gatgaaattcaaaaagaagcATTAGGTTTGAGAAGTAGAGTGGTTCGTCA
ACCTTCCGACGCTGAAAAGCTTCTTCTTCTGGTGGAAAAGCTTCACCTTC
CACCTGACTATCACATAGTTGTAGCAGATTATCATTCCCCAAGACAATGG
ATTATGGTAAAAGTTATCGGGTTGATAAGCAGGATCAATTACAAGAACTT
GATTGACTTACCAAAGAGATTAAAGTCGAAGATTTACTGAATGGTTGGAA
GGCACCGGACGTTCAACAGGAGAGGAAACAGAGCAATTTATCAATTACCT
GAAAGAAGAGAAGAAACACTAACAGAAGCAGTTCTTCACTGGAACAAATC
CAAAATCAAAAAACTTGTACCAGATTTGGTCAAGAGATATTACAAGaata
aagaaaatttaaaaatgattggTGACTTGCCAGACAAACATCCAACTAAA
ATCATAATGCAATGGAAGgatgaaattcaaaaagaagcATTAGGTTTGAG
AAGTAGAGTGGTTCGTCAACCTTCCGACGCTGAAAAGCTTCTTCTTCTGG
TGGAAAAGCTTCACCTTCCACCTGACTATCACATAGTTGTAGCAGATTAT
CATTCCCCAAGACAATGGATTATGGTAAAAGTTATCGGGTTGATAAGCAG
GATCAATTACAAGAACTTGATTGACTTACCAAAGAGATTAAAGTCGAAGA
TTTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000175_pilon | genome | sc0000175_pilon:164539..171200 + |
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