MSTRG.17103.2.p1 (mRNA) -

Overview
NameMSTRG.17103.2.p1
Unique NameMSTRG.17103.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000168_pilon:543125..545093-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17103.2.p1 ID=MSTRG.17103.2.p1|Name=MSTRG.17103.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1969bp|location=Sequence derived from alignment at sc0000168_pilon:543125..545093- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAACTCGACGAAAAAACAAATGAAGAAGAGAGACGAGAACAGCCAGAA GAAGAGAGACAAGAACAGCCAGAAGAAGAGAGACAAGAAAAGCCAGAAGA AGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAG AGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAG AGACTAGAACAGACAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAG ACGAGAACAGCCAGACGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGAA AAGAAAAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGAAAA GTTCACGAAGAAGATAATAAAGTACACGTTTTTCTTTTATAAGAACAATG AAGCCCAAAATCGCCAAAAAATAAGAACAATCTAAGAACAATTCTGAGCC TGAAATTATTCAATTTCAAGCAATTCAAGGGTTATGGTAGTAAAATCTGG GTATACTTCAATTACAGCCTATAAATAAGAACAGAATAAGAACAATTTTA GGCTCAAAGCCGAGCCTTAGAAAAATTTTACTGGCTCTTGTAAAAGTACA TATAAATTTCATTAGTAGCTTAAAAACTACACCTACTCCGAGGTAAAAAT AAATAAATAAACGTTTTATCTTAAATTTTCGATCAGAATTTAAAATCTCT TAAGCCTCAAGATTTCTTTTTATTTGGAGATTATCATGTTACTTTCGAGA TTTATTAATAGTCTTTCTTCTGTCATTCATTATTCAGGTTCCTATGGATT TTAATATCGTGGAAAGGACGCAAAATGGTGTCACGGAAATTTTGGATGAG GTAATTCGAAATAAAAAGCAATCAAAAATGAGCTAGTTTTCAATTATTCT GAGTGAAAATGAATAAGAAATTTAACGAGTATTGGGCTCTTCCAGAAATA GCTCCCCCCCCCCGGTGGAGGATATTGGACATCCAGCGGTTAATGATATT ATTATTATATTATCCAGGGAGTTAATTATCTACAAGAGAGTGGATATTTA GGGGGTAAAGAATATTTTCAAGTACGATATTAGAGGGGTAAGCATCTCTT TATAAAGGGGATGTCAAGGCGGTTGAGTATATTCTTAAGATATCCAGGGG GTTCGATACTTCGAAAAATCAATATCCTCCACCGTAGGGTAAGTTTTTTT CCGGAAAAGCCCATTCTAAGAAAATTCTTTCGTTCATTCCAGTAGCAGTT TCATAAATTTCTGTGTCTCTCAACTTTCACTATATTTTCCAACTGGCTAA ATTAAATCCCGCCAATTCTTACAATATTTATTGATTTTCGGGTTACCTAT GGTAAACACCTAGCAAATTATCGCCGGCAAAAATATTTGTTGATATAAGA TTTTTAACTCGTTTTTTCGTCACTGTTCTACCGATAAGGTAATTCGATTT TCAAGATCACGTCAATGTTTTCGGACTTCTGCCGTCAGAATAATGTTAGG TGAGTGGTAGAGAGTCGACTAACAACATTGCTTATTCAATTTTTAGATTG ATCTCAAGAAATCTTTAAACGCTTTTAACATTGGAGAAAATTTGGCAGAT GGCAATAGTGAATATCTATTATGTAGGTCAATTTTAGTTTCATCCACCAT CAGTACTTATTGAGTTTCAAATAAGGAGCCATAAATAAGGAAAAGGTTAT AACTGGAGTCGTAAGGTTAACATTAAATATCTCTTAGGGTCTGTTTTTTG AGGTCATATCTGTACTTCCAGAGATATCGTTCAACCTTATATGGAGAACC CATAAGGTCAGATATCGAATACATCTTAAAGCTAATTGAACTTGTAACTC GTCGATACAACAGTGTTTTTCTATTAAACTTTTAAATCATCATGACGATT TTTGTCTTTAAAGTTGGACAAGAGATTGTTGATCATGGCCAAGCCGCAAC AACAGCTCCAAATAGTGAG

Coding sequence (CDS) from alignment at sc0000168_pilon:543125..545093-

>MSTRG.17103.2.p1 ID=MSTRG.17103.2.p1|Name=MSTRG.17103.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000168_pilon:543125..545093- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGACAAGAGATTGTTGATCATGGCCAAGCCGCAACAACAGCTCCAAAT
AGTGAGATTGATCTCAAGAAATCTTTAAACGCTTTTAACATTGGAGAAAA
TTTGGCAGATGGCAATAGTGAATATCTATTATGTTCCTATGGATTTTAAT
ATCGTGGAAAGGACGCAAAATGGTGTCACGGAAATTTTGGATGAGAAACT
CGACGAAAAAACAAATGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGA
GACAAGAACAGCCAGAAGAAGAGAGACAAGAAAAGCCAGAAGAAGAGAGA
CGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACG
AGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACTAG
AACAGACAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAA
CAGCCAGACGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGAAAAGAAAA
GCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGAAAAGTTCACG
AAGAAGATAATAAATTGGACAAGAGATTGTTGATCATGGCCAAGCCGCAA
CAACAGCTCCAAATAGTGAGATTGATCTCAAGAAATCTTTAAACGCTTTT
AACATTGGAGAAAATTTGGCAGATGGCAATAGTGAATATCTATTATGTTC
CTATGGATTTTAATATCGTGGAAAGGACGCAAAATGGTGTCACGGAAATT
TTGGATGAGAAACTCGACGAAAAAACAAATGAAGAAGAGAGACGAGAACA
GCCAGAAGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGACAAGAAAAGC
CAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCA
GAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGA
AGAAGAGAGACTAGAACAGACAGAAGAAGAGAGACGAGAACAGCCAGAAG
AAGAGAGACGAGAACAGCCAGACGAAGAGAGACAAGAACAGCCAGAAGAA
GAGAGAAAAGAAAAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGA
GAGAAAAGTTCACGAAGAAGATAATAAATTGGACAAGAGATTGTTGATCA
TGGCCAAGCCGCAACAACAGCTCCAAATAGTGAGATTGATCTCAAGAAAT
CTTTAAACGCTTTTAACATTGGAGAAAATTTGGCAGATGGCAATAGTGAA
TATCTATTATGTTCCTATGGATTTTAATATCGTGGAAAGGACGCAAAATG
GTGTCACGGAAATTTTGGATGAGAAACTCGACGAAAAAACAAATGAAGAA
GAGAGACGAGAACAGCCAGAAGAAGAGAGACAAGAACAGCCAGAAGAAGA
GAGACAAGAAAAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGA
GACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGA
CGAGAACAGCCAGAAGAAGAGAGACTAGAACAGACAGAAGAAGAGAGACG
AGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGACGAAGAGAGACAAG
AACAGCCAGAAGAAGAGAGAAAAGAAAAGCCAGAAGAAGAGAGACGAGAA
CAGCCAGAAGAAGAGAGAAAAGTTCACGAAGAAGATAATAAATTGGACAA
GAGATTGTTGATCATGGCCAAGCCGCAACAACAGCTCCAAATAGTGAGAT
TGATCTCAAGAAATCTTTAAACGCTTTTAACATTGGAGAAAATTTGGCAG
ATGGCAATAGTGAATATCTATTATGTTCCTATGGATTTTAATATCGTGGA
AAGGACGCAAAATGGTGTCACGGAAATTTTGGATGAGAAACTCGACGAAA
AAACAAATGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACAAGAA
CAGCCAGAAGAAGAGAGACAAGAAAAGCCAGAAGAAGAGAGACGAGAACA
GCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGC
CAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACTAGAACAGACA
GAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGA
CGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGAAAAGAAAAGCCAGAAG
AAGAGAGACGAGAACAGCCAGAAGAAGAGAGAAAAGTTCACGAAGAAGAT
AATAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17103MSTRG.17103Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17103.2.p1.exon4MSTRG.17103.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17103.2.p1.exon3MSTRG.17103.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17103.2.p1.exon2MSTRG.17103.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17103.2.p1.exon1MSTRG.17103.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17103.2.p1MSTRG.17103.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168_pilongenomesc0000168_pilon:543125..545093 -