MSTRG.17094.1.p1 (mRNA) -

Overview
NameMSTRG.17094.1.p1
Unique NameMSTRG.17094.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000168_pilon:330547..332575+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17094.1.p1 ID=MSTRG.17094.1.p1|Name=MSTRG.17094.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2029bp|location=Sequence derived from alignment at sc0000168_pilon:330547..332575+ (Clytia hemisphaerica_ch_hm2_pilon)
ATACAAACCACGCTATGACAACCACTCAAACATTAAGGTACTTGGTCACA
CTGGCCATATTAACGACGATTACAACTGGCTTTCCCATTGGTCATCACAG
TAAGGGACTGAGCACTACTTGTGCATACTTCTCATGGGTATTATGCGACG
CGCCGAAGAAGAGAGACAATATTGAAACTAATGAAGAATCAAACGTGAGT
AGCgtccaagctggcacacaacgttgtttcaacgtttatctaacgttata
tggacgttgtgaacgttagataaacgttgaaacaacgttgtgtgccagct
tgggtTTAAGTCATAAACCGTTTAAGTAATTTTTTCGAACGGAGTAGGAA
CAAAAGGCTCTTCTTTTtctaatctccgagcagattttGATACTCTGCGC
ATGAGACCAATAACAAACATAATAATCAGAAGCCAGtcgctttcactttc
gttttcaagcaaaaagaaacgcgggttttgattgttttgacaACTGTGTC
AAACCGTCATATTTGCCATGCGCAGAATgaatgatctgttatgagattat
tcTTTTTCTAACTAACTTCCCGAAAGTAGGGGAAAGGGTACCTGCTTACC
CTATATCCTCCTCCTCAATCtaagaagaaaaacattaaCCAACTTTTTTA
TTAAGTTCCTGGTAAGTCTTTGACCTGACGTccaaccctggtctggaagc
cttttgtttcctTCCATTGTTTCTTAGTTGAACTTGCGTTCAGAAGtcag
tttgttttgctcactttttgatcatgtgattaaatcttaaaccaatccca
agtaCTCCccgtacttggtaacgtgatcaaaaactgagcaagtcgatttt
tatcttttgatatcaaaaaaggaaaaagctaacaaaaagttaaaacaata
agctttcAGACCAGTGTTTTTCATAGGGACTTATGGTCTTACGCACCTAA
CTAAATGGAAAATGTTAGATAACAATTTTGTACCCGCACTGGTTGGGAAA
ATACCGATCTTCCAACAGAAATATGGTCACGATGTCTCGAATTCGCACTT
TACATTTAAATGGAAGTAAAGTGTTTCTGGAAACATCTAAGTAACCTTTT
CCACTTAAAAATAATGTTAGAACAATCCAAATCTTAGAAATGGCTACGAA
ATGCTAATTTTAAGcccttttttaagcaaaaaagtcaataaCAAAAGTAG
AATAAAACTTTATTAAATAAGCCTACAATGAATCTGATGGCTTGTACACa
ctgaaattttaatttgtattcTTTTTCTAGAATTTGACGATGCTAACTGA
CGGAAAAACAGATACCaaagaagaagtaggcgaaaacgaaggaacgaagg
aatcaacgaacgaaagaacgaatgaatcagttaacgaggaagAGATGGAA
CAACAGATCGAGAAATCATTAGTTGATTTACAAATCGAACATATCAGGAA
ATATGTACTGAATGAAATTTTAGACAGTAAAAACATGACGCTACCTGAAA
AAGAACATTTGCTAGATGAGGCTCTGGAACTAAGATGATATAGAAGTCTA
CCTGACATGCATAACACgttttcttttctataaaaacgcCAGAAATGTTT
TAAGCCTAAAGGGAATCATcctgaaattttcttatttcaaGCATTTGGAG
AGTATAACTTAAAAATTTCacgttttagagtctgcaatgccttaaaatgt
ccttagaatattcttgattttttttggctgTGTTCtaatatactttgttc
ttataaaaacagcgTGTGTTATAATACCACCCAATACCTTCTTAGTTGGT
ACGAAACGTCACAAATACATCCAATTAACATCCATAAGTCGTTCAGAAGC
TTGGCTCGGTTAACACAATGCACGTCTTTAAAGGCGAAAACCAAAATCAA
CAATGTCAATATGGAAAATTGGATGAGGTCATTATAATcctccaaaaatt
aaaactcaTTAAACTTGTAAATAATCATTCAATAATTCCCTTATCAAGAC
AATTAATTTAATGTGAATTTTAAACGTGA

Coding sequence (CDS) from alignment at sc0000168_pilon:330547..332575+

>MSTRG.17094.1.p1 ID=MSTRG.17094.1.p1|Name=MSTRG.17094.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000168_pilon:330547..332575+ (Clytia hemisphaerica_ch_hm2_pilon)
ACAAACCACGCTATGACAACCACTCAAACATTAAGGTACTTGGTCACACT
GGCCATATTAACGACGATTACAACTGGCTTTCCCATTGGTCATCACAGTA
AGGGACTGAGCACTACTTGTGCATACTTCTCATGGGTATTATGCGACGCG
CCGAAGAAGAGAGACAATATTGAAACTAATGAAGAATCAAACAATTTGAC
GATGCTAACTGACGGAAAAACAGATACCaaagaagaagtaggcgaaaacg
aaggaacgaaggaatcaacgaacgaaagaacgaatgaatcagttaacgag
gaagAGATGGAACAACAGATCGAGAAATCATTAGTTGATTTACAAATCGA
ACATATCAGGAAATATGTACTGAATGAAATTTTAGACAGTAAAAACATGA
CGCTACCTGAAAAAGAACATTTGCTAGATGAGGCTCTGGAACTAAGATGA
ACAAACCACGCTATGACAACCACTCAAACATTAAGGTACTTGGTCACACT
GGCCATATTAACGACGATTACAACTGGCTTTCCCATTGGTCATCACAGTA
AGGGACTGAGCACTACTTGTGCATACTTCTCATGGGTATTATGCGACGCG
CCGAAGAAGAGAGACAATATTGAAACTAATGAAGAATCAAACAATTTGAC
GATGCTAACTGACGGAAAAACAGATACCaaagaagaagtaggcgaaaacg
aaggaacgaaggaatcaacgaacgaaagaacgaatgaatcagttaacgag
gaagAGATGGAACAACAGATCGAGAAATCATTAGTTGATTTACAAATCGA
ACATATCAGGAAATATGTACTGAATGAAATTTTAGACAGTAAAAACATGA
CGCTACCTGAAAAAGAACATTTGCTAGATGAGGCTCTGGAACTAAGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17094MSTRG.17094Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17094.1.p1.exon1MSTRG.17094.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17094.1.p1.exon2MSTRG.17094.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17094.1.p1MSTRG.17094.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168_pilongenomesc0000168_pilon:330547..332575 +