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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:278895..284099+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17089.1.p1 ID=MSTRG.17089.1.p1|Name=MSTRG.17089.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5205bp|location=Sequence derived from alignment at sc0000168_pilon:278895..284099+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTAGATCATTTATTATCGTCAGAAAAATGGTGGGATTGGCAATTTTTC
TTGATATTCTATGTCTTCACTTGTCTTTTGGACAATTTATGCCATTTCTA
CCATTCAAACACCTCCATACAAACACTGCTATCGATGGTCCCCAACCATG
GTTTGACGGAGAAGTAGCTTCCAAGGATCATTGCTTCGATAAATGCCTCA
AAAACTTCactcattgtgaatatgtacaACATAAACAAATGACCACAACA
ACATGGCTTTGCAGGCTTTTCAATGTCATCTCTGGTCTGTCAAATTATTT
GGTTTCACAAACCGGAGAAATGTTGGCTCAAGCTGTCCACGAAAATATTG
GCTGTGAAGATTGGAGATCTAGAGGACACACACAGTCGGGTATTTACTGG
ATTTTCTACAACAGAAATAAGTTCAAAGTATTTTGCAACTTTGCTGGTCC
AGATTCGTGGACATTGATAGACAAACGTCAAGATGGTTCGGTCAGTTTCA
ATCGTTTATGGCAAGAATACAAAGACGGTTTCGGAGATCTGAGCGGTGAA
TTTTATTTGGGTAATGAAAAAATCCATCTCTTAACAAAAGACCGTGAAAT
GATGGTTTATCTGCAACTTTGGGCTTTTGATGGTACAAAGTATGCAGTCG
GGTTTAAAGGCTTCTTTATCGAAGATGAAGCTAATAAATATAGGTTATGC
TCAGGTACATATGATTTCGGTGACCCAAACTTCGGGACGAATGGACTGAC
ATGAAGGAAGTAAATTTTCAACCCGAGACGATGACAATGACATAACCACA
AATATCCATTGTGGAGATAAATGGAAAACAGGCTGGTGGTTTAAGAGTTG
TGGAGGTTGTTATCTCCATAATGTTTATTCCAGTGTACCCGACGTACCGA
AACGACATGGAATTACTTGCGGAAGATTGAGAGGTGACTTTGAAAGCTTC
AAAAAACTCGTGATCTATTTCGACCCGTTGGCTAATTTTATTGATCTATT
TTATTCGCCAGATTTCATTAGTTTTCAATCCTCATAAATTTCTAATCAAT
ACGGACCCTCTGAAGCGGAAATTTTCGCACGTGAGTATATTAGCTCTCaa
aagaatcgcaaaattgcgactattttcttaaaatgggTCATTGTTGTATT
AGCAAGTACTTCGCTAAGAATGCCCTCAGAGTtcttaacaaatatttcct
tttggaaaggaaatatttagcgGGCGGATtgtatcgaaaaaaaaattttt
aaagcacTTATTAGTCATTATTAATTCTAAATTTCCAGTTTTCACGTGAc
cctttaaaaaatcaattcttatatttttttatttgttaaaaactttGTTG
GGAAAGCTGGAGTTTTTTACAAGTCTTATTATTGGTTGTCTTACGATGTA
ATAAAATAATCTATTATTTTTGAATCTCTTCACTTTCGACCTTAGTGAAA
TCTTATAAAATCCGCTCATCCAAATTTTTGCGTTTTAATAATGGCTAGTG
TGCAGATAAGTAACccaattttatttttggatGCAATTtcaaattggagc
tccgagatttTCTAAAAGGTTTAATTCACACTAACCCCTCCCGATGGTTA
ATTGAGTTCGAAGCCAATATTCAATCAACTATATTGGGCTGTCGGATTCG
CAAAATAGAAACGTTTTTCGGTACTAAATATTTCTGGAGCGAGAATTTTT
TAGCATCTTCAAAAAATGTAACGTTATAGTAATCCGTTGTTTAACTGTTT
GCACGTTTTCTTCAATTCAAGTCTATTAGttcaaaatcgatttttcatgc
atgaatgtaaacattgcaaattttcttaaaagaaacaattaaaagacgtg
tccaaaacaaactgaaaaaattgaaacaatccTGTTTgaatgtgacattt
gttttgttttgttatccCGCTGCAAACGTTTTTTAAAATTTCGTcatact
tttatgtccctttaaaaagcAACGTTGTCAATGTAACGacagaaaaatgt
ttgaaatcccatcccagctggcactcAACGTtgttttcaacgtttatcta
atgttcataacgtccatataacgttagatgaacgttgaaacaacgttgag
tGCCAGCTTAACCTCCAAGCAGTTCTTCGTGCTCCACGCATTCCACGCAT
GCGCTCTAAGGGGAATGGTTCTGCAAGAAGACCTGCGAAGGTTCTCGGGT
TTTCTTTGATGGCCgacactctgaaatttcagagtactTTTCACGATTCA
ATCGCGACATTCGCATAAAATTTATCGATTTGCTCGGGCCGTCTTTGGAT
GCGTGGGCTAAACAAAACCGATTCTACTGCGACCGTGGCTTTCTTTCTCC
GAaccaaatccaagatggcgcctgAAATTCACGTTTTGGCTCttggtcaa
tgttttgatttttttatggattttgagacttatgaaggaaaattcaatgt
ttcaaatgttGTTTATTCATTTTAGTGTAGCTCTGACATACACCCACAGA
AGTGGCTGCTCATACTTATTGACCTAAAAGCTTTGAAagactgttttgaa
agttgtattGATTGTACACTGATTTTGCTtggatgttttctcatttttgt
tcaaGATGAAGGCTCAAACACCAACCAAATTATTACAGGTATGTTCTCTT
ATGTAATGATTACTTTTCTCTTGCTATCTGCTTGATTATTAGGAGGAATG
AAGCATTTTATCAGAATAATGATAACTTAACGTGTGCGAAATGTCTGTCA
GACATTCAACcgacaaaaaattgattcaaacACCAAGAGGTTGACTATTT
TAGGCTCTATATGTATTGTTGGATATTTGGATACTCTAATTCttggaaaa
tattcaatatttcaaaagatacaGAGTATTTTGCTACtcagttcttacaa
aaaattgtttcctataaaatgataaataaatcttgaaaactGGGCCAATC
GGATACCGGTATCTGGTCACGTGTCATAGTTTTTCCCAGACCCCGACGAA
CGCGGTTTTGTAAAATTCCGCTGAATaaacttttcagatcatcatATGCC
CTAGCAATGGTGATAGGTTATGAGATTAGTGCCAGCTGGGATTTCATATT
CATACAGCACAGGGAGTGATTGGACATTTAAAGGAGATATTCAGAGAAGA
ATTTCCGGGGGTCAGGGAAGTTAATAATTTTTCGCAAGAGTTTgatttaa
attgattttattaaaattcaaaggAGTACTACCAGAAGATAAATTTCCAA
GAGTTTCCAAGAATCTGAAACCTTTTCCAGGGTGCTAAATGTTATTATAA
AATTTTCAGGGCGTAAATGAAAGGTTCATCTACCCCGCcccctgttttgt
tttgttttgttaaaacAACACCCAAACCCCATCAATCAAAGTAATATCAA
ATAGAAAAACCTTCATGATAAATAAACTCAAACCGATTCATGATTTGAAC
TAGTAAATGACTTTAATTCATTATTTAGTAAGATTTACCATGACAGCAAA
AATGTTATTACAAAATTTTCAGGGCGTAAATGAAAGGTTCATCTACCCCA
CcccctgttttgtttttgttaaaacAACACCCAAACCCCATCAATCAAAG
TATAGAAAAACCTTCATgatcaataaaattcaaatctgAACTAGTATTGA
ACTAGTAAATGACTTTAATTCATTATTTAGTAGGACTTACCATGACagca
aaattgaatgaaaattgtaaaaaaaggagaaaaaaatccccatcagaaat
taattttagtatcaaaaatttctaatttctaaaTGCATAAAGATGGATGC
TTCTGTACTTTGGTTTGGCCTCCTTTTATGTGTTCATTTCTCATTTGGGC
AATTTATGCCATTTCTACCATTCAAACATCTCCATACAAACACTGCTATC
GATGGACCTCAACCATGGTTTGACGGAGAAGTAGCTTCCAAGGATCATTG
CTTCGATAAATGCCTCAAAAACTTCACTCACTGTGAATATGTACAACATA
AACAAATGACCACTACAACATGGCTTTGCAGGCTTTTCAATGTCATCTCT
GGTCTGTCAAATTATTTGGTTTCACAAACCGGAGAAATGCTGGCTCAAGC
TGTCCACGAAAACATTGGCTGTGAAGATTGGAGATCTAGAGGTTATACAA
AGTCGGATATTTACTGGATTTTCTACAACAGAAATAAGTTCAAAGTATAT
TGTGGCTTAGGCGGTCCAGATTCGTGGACATTGATAGACAAACGACAAGA
TGGTTCGGTCAGTTTCAATCGTTTATGGCAAGAATACAAAGACGGTTTCG
GAGATCTGAGCGGTGAATTTTATTTGGGTAATGAAAAAATCCATCTCTTA
ACAAAAGACCGTGAAATGATGGTTTATCTGCAACTTTGGGCTTTTGATGG
TACAAAGTATGCAGTCGGGTTTAAAGGCTTCTTTATCGAAGATGAAGCTA
ATAAATATAGGTTACACTCAGGTACATATGATTTCGGTGACCCAAACTTC
GGGAGCGAATGGACTGACATGAACGGAAGTAAATTTTCAACCCGAGACGA
CGACAATGACAGAGCCACAACAATGCATTGTGGAGATAAATGGAAAACAG
GTTGGTGGTTTACGAATTGTGGAGGTTGTTATCTCCATAATGTTTATTCT
GGTGTACCCGACGTACCGAAACGACACGGAATTACTTGCGGAAGATTGAG
AGGTGACtttgaaagcttcaaaaaactCGTGATATCTATTCGACCCGTTG
GCtaattaattttaattgatttatttaatcaccaaatattcaatcaataa
aatttaattGATAGAAAAAAGCAGTGAGTTtataactacacgttttttat
aagaacaaactatataagaacatgaggcttcgatggccaaaatgttaaga
acaagctaagaacattttaaggcttcgcgggctctaaaaacacccgattt
cttaggaaaattgacaaaattactcaaaaaaggatcaaaataagaacatt
tttagtcttaaaactcaaaaagttaagaacattcgaaggctttaaaagtt
ttggatgttcttataaaaaaacgtgtatgtcatGTCATGCTTTATTCGAT
AAGCGTTATCTATTATTATCCGTCGTCAGTGTTGTAATTTTTGGAAAGGT
GATTGTAACATGAACTGAGCAACCAAAAGAGGGAGAGAAACTGACGGTAG
CGAAT Coding sequence (CDS) from alignment at sc0000168_pilon:278895..284099+ >MSTRG.17089.1.p1 ID=MSTRG.17089.1.p1|Name=MSTRG.17089.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000168_pilon:278895..284099+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGGGATTGGCAATTTTTCTTGATATTCTATGTCTTCACTTGTCTTT
TGGACAATTTATGCCATTTCTACCATTCAAACACCTCCATACAAACACTG
CTATCGATGGTCCCCAACCATGGTTTGACGGAGAAGTAGCTTCCAAGGAT
CATTGCTTCGATAAATGCCTCAAAAACTTCactcattgtgaatatgtaca
ACATAAACAAATGACCACAACAACATGGCTTTGCAGGCTTTTCAATGTCA
TCTCTGGTCTGTCAAATTATTTGGTTTCACAAACCGGAGAAATGTTGGCT
CAAGCTGTCCACGAAAATATTGGCTGTGAAGATTGGAGATCTAGAGGACA
CACACAGTCGGGTATTTACTGGATTTTCTACAACAGAAATAAGTTCAAAG
TATTTTGCAACTTTGCTGGTCCAGATTCGTGGACATTGATAGACAAACGT
CAAGATGGTTCGGTCAGTTTCAATCGTTTATGGCAAGAATACAAAGACGG
TTTCGGAGATCTGAGCGGTGAATTTTATTTGGGTAATGAAAAAATCCATC
TCTTAACAAAAGACCGTGAAATGATGGTTTATCTGCAACTTTGGGCTTTT
GATGGTACAAAGTATGCAGTCGGGTTTAAAGGCTTCTTTATCGAAGATGA
AGCTAATAAATATAGGTTATGCTCAGGTACATATGATTTCGGTGACCCAA
ACTTCGGGAGCGAATGGACTGACATGAACGGAAGTAAATTTTCAACCCGA
GACGACGACAATGACAGAGCCACAACAATGCATTGTGGAGATAAATGGAA
AACAGGTTGGTGGTTTACGAATTGTGGAGGTTGTTATCTCCATAATGTTT
ATTCTGGTGTACCCGACGTACCGAAACGACACGGAATTACTTGCGGAAGA
TTGAGAGGTGACtttgaaagcttcaaaaaactCGTGATATCTATTCGACC
CGTTGGCtaaATGGTGGGATTGGCAATTTTTCTTGATATTCTATGTCTTC
ACTTGTCTTTTGGACAATTTATGCCATTTCTACCATTCAAACACCTCCAT
ACAAACACTGCTATCGATGGTCCCCAACCATGGTTTGACGGAGAAGTAGC
TTCCAAGGATCATTGCTTCGATAAATGCCTCAAAAACTTCactcattgtg
aatatgtacaACATAAACAAATGACCACAACAACATGGCTTTGCAGGCTT
TTCAATGTCATCTCTGGTCTGTCAAATTATTTGGTTTCACAAACCGGAGA
AATGTTGGCTCAAGCTGTCCACGAAAATATTGGCTGTGAAGATTGGAGAT
CTAGAGGACACACACAGTCGGGTATTTACTGGATTTTCTACAACAGAAAT
AAGTTCAAAGTATTTTGCAACTTTGCTGGTCCAGATTCGTGGACATTGAT
AGACAAACGTCAAGATGGTTCGGTCAGTTTCAATCGTTTATGGCAAGAAT
ACAAAGACGGTTTCGGAGATCTGAGCGGTGAATTTTATTTGGGTAATGAA
AAAATCCATCTCTTAACAAAAGACCGTGAAATGATGGTTTATCTGCAACT
TTGGGCTTTTGATGGTACAAAGTATGCAGTCGGGTTTAAAGGCTTCTTTA
TCGAAGATGAAGCTAATAAATATAGGTTATGCTCAGGTACATATGATTTC
GGTGACCCAAACTTCGGGAGCGAATGGACTGACATGAACGGAAGTAAATT
TTCAACCCGAGACGACGACAATGACAGAGCCACAACAATGCATTGTGGAG
ATAAATGGAAAACAGGTTGGTGGTTTACGAATTGTGGAGGTTGTTATCTC
CATAATGTTTATTCTGGTGTACCCGACGTACCGAAACGACACGGAATTAC
TTGCGGAAGATTGAGAGGTGACtttgaaagcttcaaaaaactCGTGATAT
CTATTCGACCCGTTGGCtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:278895..284099 + |
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