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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:265577..269742+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17086.1.p1 ID=MSTRG.17086.1.p1|Name=MSTRG.17086.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4166bp|location=Sequence derived from alignment at sc0000168_pilon:265577..269742+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAAATGAAGTTTCCGACGGACGAAGGGAGTTGGAAACGGATTTCCTT
ACGGTTTGGGAGCGAGTTTGTCATGTGTAGCGTGtgtaaataaaaatggt
agcattTTTCATTATCGCCCTCGGCTCACTTGAACATCTGTGCAgttttc
atcatcaaaaaggCATCATCTATCACAacaaaatgtctattacagaaCAG
ATTAATACAGCGATCAAAGATGCATTGGCTCAATCTTTAGGGACGATCGT
TGAAGAAACTACGAAAGAAGTCAAAAGATCCATGCAAGACGATGTAACAG
ATACAATCGTCAAAAAAGTAAGACAAGAACAAGTGCcgactttcaagaaa
aaatttaactcTGATCAGTACAAGCATACTAAAGTCATGGAAAAGATCAT
GTCAAAAATCAACAGCAATTTAGAAGCAAACGACATTACAAAGGCCAAAG
AGAGCACCTCAGAAGGTatgaaagaaatttataaaagacAAAAGTTGATA
CAAATAGCAGATAGGGAAGAGGATGGCTGGGAGGTTATTAAATGCTATCA
GTCAGATAATTTAGCATCTGATTCTGAGGATGAAAAGAGACTAAATAAAT
CGAGAAGACAagccaaacaaaacaaaaaggaagCAAGAACTAGGAGGCTC
AATTACAGAAAAAAGTTTGATCAAAATGGCTCAAGAGATTACACGTCAAA
CTCATTTTATTCTACTAGATACCCACCCAAAGACAGATCATGTTATTATT
GTGGGAAGGAAGGACACTTTCAGTACAACTGCCCAGTCAAAAGATCAGAC
CTCAATAAAGGACACTAGGGATTacgattttaaagaaaaatgtaacGAAA
TTTCAGTATTTGGTCGTCTAAAGACatgttcaaatttttggaaaaataat
ttacacgtttcaaattttattcaaaagattATCGACGAAGGCTATTTGAT
TCCATTTAAGAGTGTTCCACCtgcattttttgccaaaaataacaAGTCCA
GTCTCGATAATTCAAATTTCGTCCAAGACGCAATCAAATCGCTATTGTCA
AAAGGATGTATATCTGAAGTTTCCGATATCCCCAAGTGTTGTAATCCATT
AACAGTTGCAGAAAGAAATTCCAAGTTACGTTTGGTACTCGACTTGCGTC
ACGTTAACCAATTTGTTGATAACCAAAAATTCAAATACGAAGATCTGAAA
ACTTTTGCAGAGCTTTCGACCAAGACGATTTCTTTATCACTTTCGACTTA
ACCTCTGGATACCACCACGTTGATATTCATCCTGAACATAAAAAATATTT
AGGTTTTCACTGGCTCTTTCCTGACGGACAAACTAAGTATTTCATATTTA
ATGTTTTGCCATTCGGACTAAGCTCGGCATGctacatttttacaaaaata
ttgagACCGTTTATTAAAAAATGGAGATCAGAAGGGAttaaaagtataat
ttttatagaCGATGGTATTTGTGGGGGAAGAGGTTTGCAGTTCGTTGAAT
CCATAGCCTTTAGAATTTTAGAAGACTTAAAGAACGGGGGATGGCTtgtc
aacttcaaaaaaaaagttcattgATTCCAACGCAAATAGGAAAGTGGCTA
GGGACTATCATTAATACAAGAACTATGACCTTTCACGTACCAAAAGAAAA
AATCGATAAACTTTTGAGAAGGATTAAACTAGTtctaaaacaaacctttt
gctcAGCCAAGCAACTTTCACGAATTGCAGGTCAACTAGCAGCGATGCAT
CTTGCTCTCGGTCCAATCGTAAGGCTTTTTACTCGATACATTTATCAACT
GATCGAATCACGCGTATCATGGTATCATCCAATTTCACTGTCTCAAGGTG
CCCTCAACGAATTaaaattttggctcaaaaacattGATTCCAAAAACGGT
TTCTCTTTCAAGCCACATCCAACCACATCAAAAATGGTCTTCACAGATGC
AAGCAATTTCGGCTATTGAGGTTTTATCGCTGAGCGTCTAAACAAAGTCA
TCTGTGTAGGAAAGTTCAGCAAATTCGAAAAAGCAACCAGTTCCACAGCC
AGAGAACTTTCAGCGGTAGATTACGTCTTGAAAAGTTTCGGTCCAAAACT
TGCAAACGAAAATATCCAAATTAACATTGATAATCAAAACGCGTGTCACA
TCCTTTCTGTTGGAAGTACCAAACCACACTTACAATCTTTAGCTCTTGAA
ATCTTTTACCACTGTATGAAATTCAACATTTCTATGCAACCTACATGGGT
CCCTAGAGAGGAAAATCAAATTGCAGATCACTATAGTAAATACAATGATA
CAGACGATTGGTCAATAGACAATAAGAGTTTTATTACCGTTTCAAAAAGA
TATGGACCTTTCACAGTTGATAGATTTGCTGACAATTGtaacagaaaaac
aaagagatttaattcaaaattctaTTGTCCTGAAACTGAATCAGTGAATT
GTTTTACAAACGAttgaaatggtgaaaataattaTCTTTGTCCACCAACC
AACCTGATTGGCTCAACGATCAGACATCTTAAAGTTTGTAATGCTTCTGG
GACTCTTATCGTACCAGTTTGGCCATCAGCTTACTACTGGCCAATCATTT
TTCCACGACAAATCATCGCAAGTTTCGtaaaagacatttttatttttgaa
cctTTTTATACTTCAATCTGTAAGGACTCTGTATTTAATGgctatgcaaa
atttaagacaATGGCTTTAAAGATCAAATTTTAAGAAGGAAAGAacgtca
aatttaatttctattttATCTTCAAGTTTTTCAGTATGTTTAAACAGGTA
AAAAGTAACTTAACATTTCATTTGAGATGCATACAGGCATTTTATTTATC
CAATAAGTAGACACCCCTGAACGGAGGGCTTTCTTAGCCGACAAAGTAGA
CACTCCAGGACGGAGGGCTTTTTAAGCCAACAAAGTAGACACTCCTGTAC
GGAGGGCTTTTTTAGCCAGTAAAGTAGATACTTCTGTGAAGGAAGGGCTT
ATCTAGCCGATAAAGTGGATACTCCTAAAGGGAGGGCTTTCAGCcagaaa
atcaTttttatttttcttcgattGAAATTCCTTTTCAGTAATTaaggaaa
atcgaaaattttttagaaCCAAAGTAACCAGTCTTCTGCGTTTGGTTTTC
TCCAAATTAATATTTTAGGCTCAATATGGTCAACCGTTGCAAACGTGAAA
GACGACAGTATTAGAGAGCTCGCTGTATCTCTTCCCGACGTAGTTATTGC
AGCAAGAGCAAAGTCAACGACATCGAAATACCAACGAGCATGGTCAAACT
GGTTGGATTGGTGTAAAGATAAAGAAGAAATCATGCCATTTCCAGCAAAC
CCCTTTTACGTAGCAATCTACCTGAACTTCGTATTGAAAACTTCGAAGAA
GAGTGGTACATTAACAACAGCCTTCTACGGCATCAGATGGGGTCATCACG
TCAACGGACTATACTCTCCTACCGACCACCCATTCGTGAGTATGACATAC
GAAGGTACGTTACGACTTTGTGAAAAGAAGCCGAAGAATCCTAAAGAACC
TATAACGCCAGAAATCCTCAAACACTTAATTAAGACTTTCGATTCAGAAT
CATTAATGAGCTTacgttttcttttgatttgctCCTTGGGCTTTTTTGGC
TTCTGCAGAATAGATGAACTATTAACCGTACAGTTGAAGGACGTAACAAT
AAAATCAGCCCACCTCGaaatttttctagaaatctcCAAAAGTGATCAGC
ATCGTGATGGTAATACAATTTACGTTTCAAGAAATGAGAACACCAAATTT
TGCCCCGTGAACTTAGCAGAAAGATTTTTATCGCTTTCAAACGTATCCTT
AGCATCCAACCCTGAATGTTTTTTAGTTCCAAGAttgattaaaatcaaaa
aaggtcACAAGATCCATTTATCCGAAGGAATTTCTTACACGAGAGCaagg
gaaatatttaaagaGAAAATGGAGGAGGCTGAAattaaaggcaatttttt
ggttTACATAGTCTTAGATCAGGTGGTGCATCTGCTGCCGCTCAAAACAA
CGTCAACGAAAGACTGATTTCAAAACATGGTCGTTGGGCGTCCGACAGGG
CTAGAAATTCATACATAAAAGACTCTATCGAGTACAGGTTAACAATTAGT
CGCCAATTGGGAATCT Coding sequence (CDS) from alignment at sc0000168_pilon:265577..269742+ >MSTRG.17086.1.p1 ID=MSTRG.17086.1.p1|Name=MSTRG.17086.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000168_pilon:265577..269742+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtagcattTTTCATTATCGCCCTCGGCTCACTTGAACATCTGTGCAg
ttttcatcatcaaaaaggCATCATCTATCACAacaaaatgtctattacag
aaCAGATTAATACAGCGATCAAAGATGCATTGGCTCAATCTTTAGGGACG
ATCGTTGAAGAAACTACGAAAGAAGTCAAAAGATCCATGCAAGACGATGT
AACAGATACAATCGTCAAAAAAGTAAGACAAGAACAAGTGCcgactttca
agaaaaaatttaactcTGATCAGTACAAGCATACTAAAGTCATGGAAAAG
ATCATGTCAAAAATCAACAGCAATTTAGAAGCAAACGACATTACAAAGGC
CAAAGAGAGCACCTCAGAAGGCTCAATATGGTCAACCGTTGCAAACGTGA
AAGACGACAGTATTAGAGAGCTCGCTGTATCTCTTCCCGACGTAGTTATT
GCAGCAAGAGCAAAGTCAACGACATCGAAATACCAACGAGCATGGTCAAA
CTGGTTGGATTGGTGTAAAGATAAAGAAGAAATCATGCCATTTCCAGCAA
ACCCCTTTTACGTAGCAATCTACCTGAACTTCGTATTGAAAACTTCGAAG
AAGAGTGGTACATTAACAACAGCCTTCTACGGCATCAGATGGGGTCATCA
CGTCAACGGACTATACTCTCCTACCGACCACCCATTCGTGAGTATGACAT
ACGAAGGTACGTTACGACTTTGTGAAAAGAAGCCGAAGAATCCTAAAGAA
CCTATAACGCCAGAAATCCTCAAACACTTAATTAAGACTTTCGATTCAGA
ATCATTAATGAGCTTacgttttcttttgatttgctCCTTGGGCTTTTTTG
GCTTCTGCAGAATAGATGAACTATTAACCGTACAGTTGAAGGACGTAACA
ATAAAATCAGCCCACCTCGaaatttttctagaaatctcCAAAAGTGATCA
GCATCGTGATGGTAATACAATTTACGTTTCAAGAAATGAGAACACCAAAT
TTTGCCCCGTGAACTTAGCAGAAAGATTTTTATCGCTTTCAAACGTATCC
TTAGCATCCAACCCTGAATGTTTTTTAGTTCCAAGAttgattaaaatcaa
aaaaggtcACAAGATCCATTTATCCGAAGGAATTTCTTACACGAGAGCaa
gggaaatatttaaagaGAAAATGGAGGAGGCTGAAattaaaggcaatttt
ttggttTACATAGTCTTAGATCAGGTGGTGCATCTGCTGCCGCTCAAAAC
AACGTCAACGAAAGACTGAatggtagcattTTTCATTATCGCCCTCGGCT
CACTTGAACATCTGTGCAgttttcatcatcaaaaaggCATCATCTATCAC
AacaaaatgtctattacagaaCAGATTAATACAGCGATCAAAGATGCATT
GGCTCAATCTTTAGGGACGATCGTTGAAGAAACTACGAAAGAAGTCAAAA
GATCCATGCAAGACGATGTAACAGATACAATCGTCAAAAAAGTAAGACAA
GAACAAGTGCcgactttcaagaaaaaatttaactcTGATCAGTACAAGCA
TACTAAAGTCATGGAAAAGATCATGTCAAAAATCAACAGCAATTTAGAAG
CAAACGACATTACAAAGGCCAAAGAGAGCACCTCAGAAGGCTCAATATGG
TCAACCGTTGCAAACGTGAAAGACGACAGTATTAGAGAGCTCGCTGTATC
TCTTCCCGACGTAGTTATTGCAGCAAGAGCAAAGTCAACGACATCGAAAT
ACCAACGAGCATGGTCAAACTGGTTGGATTGGTGTAAAGATAAAGAAGAA
ATCATGCCATTTCCAGCAAACCCCTTTTACGTAGCAATCTACCTGAACTT
CGTATTGAAAACTTCGAAGAAGAGTGGTACATTAACAACAGCCTTCTACG
GCATCAGATGGGGTCATCACGTCAACGGACTATACTCTCCTACCGACCAC
CCATTCGTGAGTATGACATACGAAGGTACGTTACGACTTTGTGAAAAGAA
GCCGAAGAATCCTAAAGAACCTATAACGCCAGAAATCCTCAAACACTTAA
TTAAGACTTTCGATTCAGAATCATTAATGAGCTTacgttttcttttgatt
tgctCCTTGGGCTTTTTTGGCTTCTGCAGAATAGATGAACTATTAACCGT
ACAGTTGAAGGACGTAACAATAAAATCAGCCCACCTCGaaatttttctag
aaatctcCAAAAGTGATCAGCATCGTGATGGTAATACAATTTACGTTTCA
AGAAATGAGAACACCAAATTTTGCCCCGTGAACTTAGCAGAAAGATTTTT
ATCGCTTTCAAACGTATCCTTAGCATCCAACCCTGAATGTTTTTTAGTTC
CAAGAttgattaaaatcaaaaaaggtcACAAGATCCATTTATCCGAAGGA
ATTTCTTACACGAGAGCaagggaaatatttaaagaGAAAATGGAGGAGGC
TGAAattaaaggcaattttttggttTACATAGTCTTAGATCAGGTGGTGC
ATCTGCTGCCGCTCAAAACAACGTCAACGAAAGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000168_pilon | genome | sc0000168_pilon:265577..269742 + |
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