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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:133186..137857- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17077.1.p1 ID=MSTRG.17077.1.p1|Name=MSTRG.17077.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4672bp|location=Sequence derived from alignment at sc0000168_pilon:133186..137857- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTTTGTTATAGTTTGAGGGTGAAAATGGAATTTTGGGTTTGGGGAAA
TGAAATTTAAGCTTGTGGGAAATTCTGCAAGGAAGTAAACGACAGGCTGG
GAAACCAAGAAAATTACGAGTCGAAACGTAGAACAAGAAAGGGAAAATAA
AAAGGAAAGGAGTTGGAGAGATATTGAATCGCCGAAAAAATAATCAACTT
TAAAAGCATCAAGCCAACCATCGACGATACGAAAAATCACCGAAATGGAT
AAAGAACTGTTTACAAATTTCATCATCTACATTGCAGTGACTCTTTCTAT
CTTGATTACTTTAGTCAACGTCATATGCATCACAGTCATATTAGCATGTC
CGAAACTCCGCCAGAAACCGCCCATGGTGTTCATCGTCAACCTACTTGCC
ACCCATCTACTTCAGGGCGTTTTTGTGCTCCCTATATACGCTGTTAAAAA
ATCTAAAGATTATCCGTTAGATTTATACCCTTTCGTTTGTGATGCATGGC
GGTTATCTTATATGCTTACGTTTTACGGCACGTGTATCAACGTATTACTG
GTCGCCGTTGATCGTTACGTAGCAACCAAATATGCAATGTCAGCAAAAAT
CGTATTGACAACAAAGAGATGCCGCATCATATGTGCTGTTGCATGGATTT
ATATCACAGCGCTTTGCTTGATTCCATTCATCCCGTTAGAGCGCTCAAGA
TCGTTGAAGACTTCCAAATGTAATTACAATCAACCCAAGCAATGGACTAT
TTTTATGTTAATGGCAAATACGGTGGTCCCTTTTTTGTTGGTGACGCTTA
TTTATGCGTATATTATACAGATCTTAAGGCAAACATCATCTACCCTACAG
AAGGTATGCATGCAAATTACACCCTGTCTCTATGGGCAAGTGGATTCTCT
CCTCCAGTAACTTCCGAGGCAATAATTAATTTTATGAGCTGTCGATTATA
TAATTAATACTAATTTCTTCTTCACTAAAAAGATCACAGGCAGTGTTGAA
ATCGCCTAGGAAATGGGATGATACAGAATGGCACGAATATGTCATTGGAA
AATTGGAGGGATTTTGAAATTTTACATCAAATGAGAATTTTTATTTGAAC
CTCAGTGGAAAGAAAGGAAAAGTTAGTCACCCCTTTTGAATGCTATGAAA
TATCTTAAAATCTTAATATCCTAACAGCCTGACCGAGAGATAGAGATGCA
CTTTTAATGAAAACAAATTATACTTAAAAACTCTTATTGTTTACAGGTCA
ATTCAATTCGTAACGAAACACCACGCAAAAAAATTAAAGGAGGTCAACCA
AAAACATCTTCTCCAATCAACAAGAAATTGACATGGCTTACCATAAAAAT
CACACTGACCTACGGCGTGACGTGGCTTCCCAGTATTGTCTATTACAACA
TTGTCACCATCGCACCTGACACGTTTAGCGCGGAATTCTACGTGTCGGAC
ACGGAAAGTTTGATCACGTTTTTCATCAAATATATCACGTTTTTCGATGC
TGTTCTTGCGCCAATTATTTATTGTCATCAAAGTAGAGATTTCCGAAGAG
CATTTCGTGATTTCAGAGCAAGAATAATGAGAAATTGGTACGCTTTTGGG
AAGCAATAAACAGTGGCCTAAGCAAAATCTTTTGTATCAGATAAAAATGA
ACTACAAATAAGGCAAGATTCTTCAAATTTTGCAGAATTTTATTGAATTT
TGAGACAGGAAAAGCCTGTTTTGTCACCGAAAAAGAAGTCCGGCTGGGAG
GGAAGAACATAGTACAAGGTCTTTGAGAAACCTTTTCCATAAAGATGAAT
TTGTCGTGTCGTTCGCCACAACACCAGACCGTAACACGAGAACGTAACAT
CAGACCGTAACACGAGAACGTAACATCAGACCGTAACACGAGAACGTAAC
ATCAGAGTAACGACGAGACCGTAACACGAGAACGTAACATCAGAACGTAA
CACGAGAACGTAACATCAGACCGTAACACGAGACCGTAACACGAGAACGT
AACACCAGAACGTAACACGAGAACGTAACACGAGAACGTAACACGAGAAC
GTAACACGAGAACGTAACATCAGAACGTAACACGAGAACGTAACATCAGA
ACGCAACACGAGAACGTAGCACAACCACTTCAGTCTAAAAGGCTGCCAGC
ATCCTTTTGATTTGTTTTGTTAGCCCTTTGAGCATCTTGGTGGAGTGACA
TCACAAAATTTGAGCAAAAGCATGGTTGGCCCTCGCGGTGTCAAAAGCCC
CCCCAAAATGAAAATGCGGAAATGGAAGTAAATAGGGGATACTTCTTTCG
GCATTCAAGGAATGATGACGTCATCATGTAGCAAAGACGTCATCAATTAT
GCCGAAATTTTTACCAAAGATGCCAATTTACATTGTATGCACACTTGCAA
AATCGGGCAAATATTCGAAAGTTATCAAAATTTTTAGATACTCGAAGAGT
TACTGGGGTTTGGACCTACAACTTCTGGGAATTGAACGAAAAAATATCAA
CGTGAAAAAGAAAGAACTGTTTAATAAAGCTTTCTTTCTAAATTATCTTT
ATGAAAAATATCGTCGTTGATATATAAAAGTCTTGTATATATTTTTAAAA
ATATTGGTAGTATCTTCTTTTCAAAATTCTAATCTAATACACCCGTAAAT
AAATACACAATATACCTCTGTTTAGGAAAAAAACAACAAATAAATTTACA
AAATGAATTTCGGACTAACTGTCCGGGAAAATAATGTGTCAATGTTTAAA
CTGGATTCAATAACCTGAGTTTTCTAACCATCAGCGATTCAGGATTCTTA
TGGCTTATCCTGTTAGGGACTGAAGGTTTCATTCAAACTTGTTTTCGATT
GAAGTAAATAATGTAATGAGGACTAAGTACTTATTCAAGACGAGTTAGTA
TTATCTCGGTCATTCCTTGATGTTTGCGACTCAATCTTTAACGTGAAAGC
ATCTGAAAATATATTTTATAAGATCATTTCTATCGAACGTTTTCATTCTT
TGCTTCATAGCAATATGATAGTGCCGTAGCTACCGAGTGCCGTAGCTACA
GAGGTCCGAGAGGGGTGCAAGACAGGGGGCATGAGGGAATTTATCCGTCT
CCCCCTGCTTTTGAGAAATGGTTGGACTACGCAATAGCATAGGGTATATA
ATACACCCTCTACTCAATTTCAAAATAGTTTGGAGATTAAGAGGTAAGCA
TAATCCACCGACACTTAATATTTTAGCACCATTGTTTTCAAATAATCTAA
CCATAAGCTCTTCGGCTATGTATGCCAAGCCTATCATATTCGGTCATCCA
CGCTTTATATGACACGTGGTAATTATCAAACCAAAATTGTTGTTAATTTT
TTTCAGCCTGAATTAAGCTTGTCATACCTGAGTATGAAGTTTTGCCACTT
TCCTTTTTTAAATCAAGGGTTTAGTTTTAGGTAATAGAGGTTTCCCATGT
TTTGTTAAGTTACGTAATTCCTGCCATTATGAAAGCAAACGTTCGATTTG
CGCAAGGGGTTTCCTCTACAGATTCAAACGTTTGTTGTGGAACGGTGGAA
GTTACGTAACTTAACTAAATTGATGCTGATAAAGGTCGTGAGAGGGAATA
AAGCAATAAAATGCAATAAAACTCTAGTTACACACTCTGATGTGATCTTG
AGAATTACACCTTGATTGAAAGAAGGTTTTTTAAAGGTTCAAAGAAATTT
CGAACCTCAAAAGCCTTGAGGAGCTTCCGCATTGACCATTTGGTCTTCAA
TATCACAGATTTTGTGCGTGTGTGCTTTCAGCAAAATAATAAAAACATCA
TATAGTGTCAATGAAACAGATACTTAAGGTAATAAAAACATCTCATTAAG
CCAGGATTAGCCACACCTTGAACATAGACAATGAGAGATAGAGAAAACCT
ATCGTCTCCGCGAACTTGGCATCGCCTCGTGAATATTTATAGTGTTTTTC
AGTGTGTTGAAATGAAAGAGTCCGTCGTTTCCAAGTTACGTAACTTTAAT
TATTTTTACTCTTAGCTCCTTGTTGAAATACCTTACTCGTAACTTTTGAA
TGTTTGAACAGTTCTACCAAGGGCAGGTATCGCGATGACGTCATTTCCAG
CCAATCATATCGCTCTGATTCAGAACCCATTCAAAAATAAAATTTTCAAT
AGTTTCGTTTTTTAAAAATCATTCTGTGCATAGTAAGTGTAGTTTTACCA
ATAAACGTGCACCCAATTCCAAGTGCATGGTATCGACCAATCGCAAACCA
GGAAGCTTTCGTCTCGACCAATGTAATGTACTCTCCATTGTTCCAAGCCA
TCCAATCAAACCTTGGTTTATCGCGTTCAATTACGAGATTTTTGTGAAAT
GATTTTATTACGTTGTGACATAGCGTGCGAATTTTGTGAGATCGCGCGGG
CGATATTTTGTAAAGTGCGTCCCTTTTTGTAGGCGAATCTGAAGCGTTTA
TTGGTATGGACGATTTTTCTTTGAACCTGAAATGACAAAAACATAGAGTT
TTACGATGTGTAATTTGTCCTTGGCTTCCTGTTAATCTTCAGTCAGATAA
AATTATTTTTTTCAGATTGTGGACCTAAATCACACTATAGTGACAAATGC
AGAAAATCAATAAAAATTGGTTCCCCGATAGAAAATTCCCATGATAGTAA
AGAAAGACCCCATATCATGTCA Coding sequence (CDS) from alignment at sc0000168_pilon:133186..137857- >MSTRG.17077.1.p1 ID=MSTRG.17077.1.p1|Name=MSTRG.17077.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000168_pilon:133186..137857- (Clytia hemisphaerica_ch_hm2_pilon)
GTCAATTCAATTCGTAACGAAACACCACGCAAAAAAATTAAAGGAGGTCA
ACCAAAAACATCTTCTCCAATCAACAAGAAATTGACATGGCTTACCATAA
AAATCACACTGACCTACGGCGTGACGTGGCTTCCCAGTATTGTCTATTAC
AACATTGTCACCATCGCACCTGACACGTTTAGCGCGGAATTCTACGTGTC
GGACACGGAAAGTTTGATCACGTTTTTCATCAAATATATCACGTTTTTCG
ATGCTGTTCTTGCGCCAATTATTTATTGTCATCAAAGTAGAGATTTCCGA
AGAGCATTTCGTGATTTCAGAGCAAGAATAATGAGAAATTGGTACGCTTT
TGGGAAGCAATAAATGGATAAAGAACTGTTTACAAATTTCATCATCTACA
TTGCAGTGACTCTTTCTATCTTGATTACTTTAGTCAACGTCATATGCATC
ACAGTCATATTAGCATGTCCGAAACTCCGCCAGAAACCGCCCATGGTGTT
CATCGTCAACCTACTTGCCACCCATCTACTTCAGGGCGTTTTTGTGCTCC
CTATATACGCTGTTAAAAAATCTAAAGATTATCCGTTAGATTTATACCCT
TTCGTTTGTGATGCATGGCGGTTATCTTATATGCTTACGTTTTACGGCAC
GTGTATCAACGTATTACTGGTCGCCGTTGATCGTTACGTAGCAACCAAAT
ATGCAATGTCAGCAAAAATCGTATTGACAACAAAGAGATGCCGCATCATA
TGTGCTGTTGCATGGATTTATATCACAGCGCTTTGCTTGATTCCATTCAT
CCCGTTAGAGCGCTCAAGATCGTTGAAGACTTCCAAATGTAATTACAATC
AACCCAAGCAATGGACTATTTTTATGTTAATGGCAAATACGGTGGTCCCT
TTTTTGTTGGTGACGCTTATTTATGCGTATATTATACAGATCTTAAGGCA
AACATCATCTACCCTACAGAAGGTCAATTCAATTCGTAACGAAACACCAC
GCAAAAAAATTAAAGGAGGTCAACCAAAAACATCTTCTCCAATCAACAAG
AAATTGACATGGCTTACCATAAAAATCACACTGACCTACGGCGTGACGTG
GCTTCCCAGTATTGTCTATTACAACATTGTCACCATCGCACCTGACACGT
TTAGCGCGGAATTCTACGTGTCGGACACGGAAAGTTTGATCACGTTTTTC
ATCAAATATATCACGTTTTTCGATGCTGTTCTTGCGCCAATTATTTATTG
TCATCAAAGTAGAGATTTCCGAAGAGCATTTCGTGATTTCAGAGCAAGAA
TAATGAGAAATTGGTACGCTTTTGGGAAGCAATAAATGGATAAAGAACTG
TTTACAAATTTCATCATCTACATTGCAGTGACTCTTTCTATCTTGATTAC
TTTAGTCAACGTCATATGCATCACAGTCATATTAGCATGTCCGAAACTCC
GCCAGAAACCGCCCATGGTGTTCATCGTCAACCTACTTGCCACCCATCTA
CTTCAGGGCGTTTTTGTGCTCCCTATATACGCTGTTAAAAAATCTAAAGA
TTATCCGTTAGATTTATACCCTTTCGTTTGTGATGCATGGCGGTTATCTT
ATATGCTTACGTTTTACGGCACGTGTATCAACGTATTACTGGTCGCCGTT
GATCGTTACGTAGCAACCAAATATGCAATGTCAGCAAAAATCGTATTGAC
AACAAAGAGATGCCGCATCATATGTGCTGTTGCATGGATTTATATCACAG
CGCTTTGCTTGATTCCATTCATCCCGTTAGAGCGCTCAAGATCGTTGAAG
ACTTCCAAATGTAATTACAATCAACCCAAGCAATGGACTATTTTTATGTT
AATGGCAAATACGGTGGTCCCTTTTTTGTTGGTGACGCTTATTTATGCGT
ATATTATACAGATCTTAAGGCAAACATCATCTACCCTACAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:133186..137857 - |
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