MSTRG.170.1.p2 (mRNA) -

Overview
NameMSTRG.170.1.p2
Unique NameMSTRG.170.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:3269802..3271338-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.170.1.p2 ID=MSTRG.170.1.p2|Name=MSTRG.170.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1537bp|location=Sequence derived from alignment at sc0000001_pilon:3269802..3271338- (Clytia hemisphaerica_ch_hm2_pilon)
GGCTAATCCTGCAATTGTGGAGGATATTTTTGCAAAAGTATTAACATTGC
AACCATTACCAGTTGACCCAACAAAATGCACTCCGAATAAATCATTGTAT
CACCAGATTCTCAATAACTGTAAATCAACGTCGGAAAGACAAGCAAAACA
GTTTAACTTGGGCAACACACATTGCACAGCGAACCCTATCGATGCAGCCG
ACTTCATTCTTGAAAGGGAATATTCGTTCAAAATGAACACAAAAGTGTTT
TCATACCTCCAGCGTTTGTTTCAAATCAATACAGAAAATCTTCTACTGCT
ATTCTGGATTATGACGTCAAAAAAGACATTGATAGACTTGCAGATAATTT
GAAACAACATTCACCAACGTATTGGCTGACCAAAAATTGCAATCTTTCAT
GAATACTCAAACTGATGCTGATTCTATTGAAAGAAAAGCGTTTGAACGAT
GGATATTAAACCTCCAAATCTTGTTTCTGCTCATCATAGAACTGAAAACT
GACCAAGTAAACCTACCTTCAACAATATCAGAGCAAGAAGTTTTCATTCA
AGGATGTATCGCTGTACTTCTCCTTCAATCGCCATTAAAAACATTTCTCC
AACATAATCTTCCGGTAAAAAATCTCAAACGAAAGGTCAAACGAATGATC
CAGAGTGTACCAAACCAGGATTCAAACCTAAAATGGCTTTTCGGATTGGA
GTTGTCAGATATTGGAGAAAAGCTAGAACATTTATTTTATGACCAACTGT
TACCATTGAAAGATGACATTCTCCAGGACACAGTTTTTCTTACAGCTTTA
ACTTTCTTCACGAATCTTCAAAATAAAATGCACAAAGAGACAGACTTTAT
GATTATATCTTGGGAAAGGAAGCTTATCATTTCTATAGAATTAAAACGCA
CAATTGCAGATGAAGAAGTCTTTAAGCAGTTGGAAAAGAGCCATCGAATC
TTTGAGGAGAGACTTGGAGACCGATTGGGATCTGATTGGACGTACTTTCC
GGTGATCTCTGTGGAGAAGGACGCTCTTTTAGTAAACAGCTTGCATTATA
TCACCAAGGAAGTCGAAATTAACCAATGGTTGACCAGTATCTTCAACAGA
TTCCCGCCTCTCCAAGCAACTTCGAACTCTTTGAACGAAGTGAAAGATCT
CTTAAAAATCCTTGTTTTTGCCGTCCACGTTTCGAAAAAAGATCAAGTCG
CACCTATTACGAGCTCTACGTGGGTTGAATACACCAGCAACGCTATCGAA
AACGTTTCGACTATCCACAACATTTTATTCTACTCCAATCAACAAATGGC
GATAATGAACAATGATGATCCACGCTACAAGAGGATTATCATTCATGGCC
CATTTGGTGTGGGGAAAAGTATATTACTCAAACAAAAGGCAATTCAATTA
AACAAACAACCTGGATTCAACGGAAAAGTTCTGTTCCTACAAGAAACAAG
TGCTTCCGAAACCATCAAACCAATGCTTTATCATCGATTAAAAGTGGAAT
TGGAAGAACAGCACGGAATATCTGTTATAGAATTCAA

Coding sequence (CDS) from alignment at sc0000001_pilon:3269802..3271338-

>MSTRG.170.1.p2 ID=MSTRG.170.1.p2|Name=MSTRG.170.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=351bp|location=Sequence derived from alignment at sc0000001_pilon:3269802..3271338- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAATCCTGCAATTGTGGAGGATATTTTTGCAAAAGTATTAACATTGCA
ACCATTACCAGTTGACCCAACAAAATGCACTCCGAATAAATCATTGTATC
ACCAGATTCTCAATAACTGTAAATCAACGTCGGAAAGACAAGCAAAACAG
TTTAACTTGGGCAACACACATTGCACAGCGAACCCTATCGATGCAGCCGA
CTTCATTCTTGAAAGGGAATATTCGTTCAAAATGAACACAAAAGTGTTTT
CATACCTCCAGCGTTTGTTTCAAATCAATACAGAAAATCTTCTACTGCTA
TTCTGGATTATGACGTCAAAAAAGACATTGATAGACTTGCAGATAATTTG
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.170MSTRG.170Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.170.1.p2.exon1MSTRG.170.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.170.1.p2MSTRG.170.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:3269802..3271338 -