MSTRG.17.1.p1 (mRNA) -

Overview
NameMSTRG.17.1.p1
Unique NameMSTRG.17.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:192128..193738+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17.1.p1 ID=MSTRG.17.1.p1|Name=MSTRG.17.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1611bp|location=Sequence derived from alignment at sc0000001_pilon:192128..193738+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTTCGTTTTGACTGCGACACTTTTAAATAGGGTTAAGGAAAAGAGA
TTTACAAGAAGGGGAGAGCACTTTACTACTTTAGTAATAATAATATGTTG
ATTAATAGCCGACAAAACTGGCTTTCAAAATAAACGATAAAAAACTTTGC
TGAAAgttcatattttttttgacaTCGATGTACATGTAACGTTTGATTTT
AAATGGTAAACAATTACAAAACAAACCAGTAGAAAATTCACGCTACAAAA
TTAATCAAGGAACTATATAAATGTTTGGTCAAGATTAATTTCAATGTTAT
TGGGAATATTGGGAGATCTAGAGACCAGACACGTGATCGTCAACAAGAAA
ATGTATACCTTCTTCATATTGCTAACTTTGCAAATTATTACTGGTGTAAT
TGCAGGTAAAGCACCAAGAGATTTGAAGAAAGCTGGTGAGCATTATGATG
AACATAAGATTGTTTTTGTCAAGAAGGCTATGACTAATCCTTTGAAATTG
ACACATCTTCCAAGACCTAAAAATATTCAGCTGGCTGATTTTAAACAGAC
AACCAGCAGAGGCAGCAAAAGGTTGTTTGCCAGTATGGCTAATGTTGATA
CCTTGAAATCGGTGCACTTTCCATGGTTCAGAACTACTCACAGCAGTAAT
TCTAAAGCGACGTCTGAAAACATAGCAGCAGATTTTAAAATCAAACCGAA
AAACTACCACTTAAGTGACTTCCGAGCACAATCATCTAACAACAGTGGTA
AAAAATCATCTGTGAAAAGGGCACCATCTTTATATGTGGATTACATTATT
GGAAATCATCGCGTCTTTGAGGGAAATTCtcataaaacaaaaacagaacc
aCAGGCAAAGGATGTTAAGAGTCACAATCTCATGAGAAGAAACGCGATTT
ATGACAAACATTCAAGAGgtgaaaagataaacaaaactGCTTTCGGGTTC
AGCGTCtttggtttaattttgtgttttttgttaatggtggtattgatttt
tttgtactGGAGTAAGAAATATTGCGATCAGAAATGTTTATGTatgaaag
tttgatttttatCTGAACACTCTCTTGTCCatttattttggtatttgaca
ttcttgaattattttttgtgatttagTAATAGATTTCTCAACTCTCATAC
AGAAACtcttattttgtaaattttaagcAGTACCTCACAGTACAGATAAT
AGGCGCAACATTTGATGTAAGTAAGACCTCTTTTGATTTGGCATTTTGAA
CCCAAAAACATAATAGctgaatagaaaaaaaaaattacctgtTGTTTGGA
AAGAGAAAGGTGGCCTTCCACTGGACATGGATTTCCGCATGAATCGAATA
ACTGAAGTGATTTTTGGAGATCTGAAAATTgggaatgttaaaaaaaatac
gaaCGGATTCAGCTGACTTTTTTCTTGTAATAGCCCTATTTAGAGAAAAT
TTCCCGCTCGGAAAAGGTCGGATAcgacacccctgtatcacagccctggc
gaaaatttcttcccgaaGTGAGATGACAATCATTTTTATGAAACTCccaa
tgaggatagaaattctattgttcaagctcaaaaaatccagtggggattaT
TTTGGAATACA

Coding sequence (CDS) from alignment at sc0000001_pilon:192128..193738+

>MSTRG.17.1.p1 ID=MSTRG.17.1.p1|Name=MSTRG.17.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000001_pilon:192128..193738+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATTGGGAATATTGGGAGATCTAGAGACCAGACACGTGATCGTCAA
CAAGAAAATGTATACCTTCTTCATATTGCTAACTTTGCAAATTATTACTG
GTGTAATTGCAGGTAAAGCACCAAGAGATTTGAAGAAAGCTGGTGAGCAT
TATGATGAACATAAGATTGTTTTTGTCAAGAAGGCTATGACTAATCCTTT
GAAATTGACACATCTTCCAAGACCTAAAAATATTCAGCTGGCTGATTTTA
AACAGACAACCAGCAGAGGCAGCAAAAGGTTGTTTGCCAGTATGGCTAAT
GTTGATACCTTGAAATCGGTGCACTTTCCATGGTTCAGAACTACTCACAG
CAGTAATTCTAAAGCGACGTCTGAAAACATAGCAGCAGATTTTAAAATCA
AACCGAAAAACTACCACTTAAGTGACTTCCGAGCACAATCATCTAACAAC
AGTGGTAAAAAATCATCTGTGAAAAGGGCACCATCTTTATATGTGGATTA
CATTATTGGAAATCATCGCGTCTTTGAGGGAAATTCtcataaaacaaaaa
cagaaccaCAGGCAAAGGATGTTAAGAGTCACAATCTCATGAGAAGAAAC
GCGATTTATGACAAACATTCAAGAGgtgaaaagataaacaaaactGCTTT
CGGGTTCAGCGTCtttggtttaattttgtgttttttgttaatggtggtat
tgatttttttgtactGGAGTAAGAAATATTGCGATCAGAAATGTTTATGT
atgaaagtttga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17MSTRG.17Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17.1.p1.exon1MSTRG.17.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17.1.p1MSTRG.17.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:192128..193738 +