MSTRG.169.1.p1 (mRNA) -

Overview
NameMSTRG.169.1.p1
Unique NameMSTRG.169.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:3268175..3269432-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.169.1.p1 ID=MSTRG.169.1.p1|Name=MSTRG.169.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1258bp|location=Sequence derived from alignment at sc0000001_pilon:3268175..3269432- (Clytia hemisphaerica_ch_hm2_pilon)
CAGACTCGTGCACTCTTCTTCTGGAAACGATCAAATCACGTGACATCAAA
GCTATCTTTTTCGATGAATGTCAAATGACACCGTATTCAGAAACTAGAAA
GTGGATAGAGAAGGAGATTATGCCACGAATTGAACACTTATGGATTGTTC
CATCAGCACAAGACTCGAAAAAAATAGATCACCAAAAATTATCAACACAA
TTTACCATGGTCAACCTCGAGCAGAACTTTCTCGAGAGGTTGTCAAGGCA
ACAAAATCAGTAGCCGAGAAAATGAATTATGAGTATAAAGAAGGCATCGT
GATGCCTCTTGAAAATTTTCCAAGTGGTTGCGATCCTTTATTTGTTGATT
CTTTCAAAGAAGCAGTAATGGAGGCACGCAAACGAGCGAATGAAGGTATC
CTTGTAATAGTCGATTATCACGATGACTTAAAAGACTATTCTGGTGTTCT
CAATCAGTTAAACGAGCATTGGAAAGCTTACCATGAATGCAAAAGTGATT
TTAAGGATCAAGAAAATCCGTACAAGTTTCTTCATGATGGTAATGTTTTG
TTAATTGATGAATTTGGATCATATGGTTTTGATTGGTATACTGTTATTAT
ATTTGAACAGATGGAGGAAGGTGGTGGCGAAATTATGCATGATTGTAATT
ATATGCTTAGATGTACCACAAACCTCATCGTGGTAAAAAGTGACGATGAG
AATCTTGGAAGTGATTCTGAAAATGGCGATGAAAGTGATTTTGAAGACAA
GATTAATTCTGAGGTCTCTGAAGGCGATTCTGTTGGTGATGAAGGTGATT
CTGTTGGTGATGAAATTGATTCTGATAACTCTGAAAGTAATTTTGATGAT
GATGACGATTTAAGTGATTCTGAACATAAAAAAAATGACTCTGAGAACTC
TAACAGTGATTTTGATGGTGGTGAAAGTTATTCAGAACATGGTGATTCTG
ATACTGGTAGCGATGGATCCAGCAATGATTGTAATCAACAATAGTGAAAA
TAACATTTTGAATTTTAATTTCATTTGAATTTCAAATATCTTTTCACGGG
GTTGACGTTTTCAAATACTTTTTGACCTTCATCATTTAAAATAAAACACT
GCGATCTGTGTCAACTGGGAAAAAAAGCACATGAGAACGACAGCATTCCT
CTTAGCCCAATGAGTGTGTGAATCTTTGTGTTCATTCATTCTTCTAGCAT
AATTTACGGTGGTTTATGTTTTCTATTAAAGAGAGAAATTATTAATTAAA
CACTTTGA

Coding sequence (CDS) from alignment at sc0000001_pilon:3268175..3269432-

>MSTRG.169.1.p1 ID=MSTRG.169.1.p1|Name=MSTRG.169.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=855bp|location=Sequence derived from alignment at sc0000001_pilon:3268175..3269432- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGTTCCATCAGCACAAGACTCGAAAAAAATAGATCACCAAAAAT
TATCAACACAATTTACCATGGTCAACCTCGAGCAGAACTTTCTCGAGAGG
TTGTCAAGGCAACAAAATCAGTAGCCGAGAAAATGAATTATGAGTATAAA
GAAGGCATCGTGATGCCTCTTGAAAATTTTCCAAGTGGTTGCGATCCTTT
ATTTGTTGATTCTTTCAAAGAAGCAGTAATGGAGGCACGCAAACGAGCGA
ATGAAGGTATCCTTGTAATAGTCGATTATCACGATGACTTAAAAGACTAT
TCTGGTGTTCTCAATCAGTTAAACGAGCATTGGAAAGCTTACCATGAATG
CAAAAGTGATTTTAAGGATCAAGAAAATCCGTACAAGTTTCTTCATGATG
GTAATGTTTTGTTAATTGATGAATTTGGATCATATGGTTTTGATTGGTAT
ACTGTTATTATATTTGAACAGATGGAGGAAGGTGGTGGCGAAATTATGCA
TGATTGTAATTATATGCTTAGATGTACCACAAACCTCATCGTGGTAAAAA
GTGACGATGAGAATCTTGGAAGTGATTCTGAAAATGGCGATGAAAGTGAT
TTTGAAGACAAGATTAATTCTGAGGTCTCTGAAGGCGATTCTGTTGGTGA
TGAAGGTGATTCTGTTGGTGATGAAATTGATTCTGATAACTCTGAAAGTA
ATTTTGATGATGATGACGATTTAAGTGATTCTGAACATAAAAAAAATGAC
TCTGAGAACTCTAACAGTGATTTTGATGGTGGTGAAAGTTATTCAGAACA
TGGTGATTCTGATACTGGTAGCGATGGATCCAGCAATGATTGTAATCAAC
AATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.169MSTRG.169Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.169.1.p1.exon1MSTRG.169.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.169.1.p1MSTRG.169.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:3268175..3269432 -