MSTRG.16660.6.p1 (mRNA) -

Overview
NameMSTRG.16660.6.p1
Unique NameMSTRG.16660.6.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:687327..688437+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16660.6.p1 ID=MSTRG.16660.6.p1|Name=MSTRG.16660.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1111bp|location=Sequence derived from alignment at sc0000159_pilon:687327..688437+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGGTCAGTTTTCCATCTATTGAGACTGCAAACTGTTCAGTTCAAAACCG
TTCAGTTTTCACTCTATTTGGACTGCAAACCATCCAGTTCAAAACGGTCA
GTTTTCATCTAATTGGACTGCAAACCACTCAGTTCAAACCATTCAGTTTT
CATCTAATTGGACTGCAAACCATCCAGTTCAAACCATTCAGTGTTCATCT
AATTGGACTGCAAACCACTCAGTTCAAACCATTCAGTTTTCATCTAATTG
GACTGCAAACCATCCAGTTCAAAACTGTTCAGTTTTCCTTCTGTTCGGAC
TGTGAACCATCTAGTTCAAACCGGTCATTTTCCATCTATTTTTACTGCAA
ACCATCTAGTTCAATCCAGTCAGTTTTTCATCTGTTTGGACTTCAAACCA
TCTAGTTCAAACCGGTCAGTTTTTCATCTGTTGAGACTGCAAACTGTTCA
GTTCAAAACCGTTCAGTTTTCACTCTATTTGGACTGCAAACCATTCAGTT
CAAAGCGGTCAGGTTCTTTCTGTTTGGACTGCAAACCATCTAGTTCAAAC
TGGTCAGGTTTTCATCTATTTGGACTGCAAACCATCCAGTTCAAACCTGT
TCATTTGTCCGTCTATTTTGACTGCAATCCCCTCAGTTCAAAAACCAGTC
ACTTTTCCATCCTTCTGGACTGCCAACATCCAGTTCAAACCGGTCAGTTC
TCCATCTATTTGAACTGCAAACCCCTCAGTTCAATAACTAGTCAATTTTC
CATCCTTCTGGACTGCAAACCATCCAGTTCAAAACCGGTCAGTTCTCCAT
CTATTTGGATTGAAAACCATCCAGCTCAAAAACCGGTCACTTTTCCATCC
TTCTGGACTGCAAACCTTTCAGTTCAAGCCGGTCAGTTTTCTATCTGTTC
GGACTGAAAACCAAACAGTTCGAACTGGTCCGTTTTCCAACTATCTGACT
GCACATTTTGTATATTCCAAGTATGTCAACACTATTGTTTGTAATCGATT
CCAATTGATCTCGGCATTTTCCATAAGACGGGTCTATAGCCAGACCGTGT
CAAAGGCTGCTTTGAAATGCATAATTGGAATCTTAGTgggattgtttttc
ttttagagCAA

Coding sequence (CDS) from alignment at sc0000159_pilon:687327..688437+

>MSTRG.16660.6.p1 ID=MSTRG.16660.6.p1|Name=MSTRG.16660.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000159_pilon:687327..688437+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGGTCAGTTTTCCATCTATTGAGACTGCAAACTGTTCAGTTCAAAACCG
TTCAGTTTTCACTCTATTTGGACTGCAAACCATCCAGTTCAAAACGGTCA
GTTTTCATCTAATTGGACTGCAAACCACTCAGTTCAAACCATTCAGTTTT
CATCTAATTGGACTGCAAACCATCCAGTTCAAACCATTCAGTTTTCATCT
ATTTGGACTGCAAACCATCCAGTTCAAACCTGTTCATTTGTCCGTCTATT
TTGACTGCAATCCCCTCAGTTCAAAAACCAGTCACTTTTCCATCCTTCTG
GACTGCCAACATCCAGTTCAAACCGGTCAGTTCTCCATCTATTTGAACTG
CAAACCCCTCAGTTCAATAACTAGTCAATTTTCCATCCTTCTGGACTGCA
AACCATCCAGTTCAAAACCGGTCAGTTCTCCATCTATTTGGATTGAAAAC
CATCCAGCTCAAAAACCGGTCACTTTTCCATCCTTCTGGACTGCAAACCT
TTCAGTTCAAGCCGGTCAGTTTTCTATCTGTTCGGACTGACCGGTCAGTT
TTCCATCTATTGAGACTGCAAACTGTTCAGTTCAAAACCGTTCAGTTTTC
ACTCTATTTGGACTGCAAACCATCCAGTTCAAAACGGTCAGTTTTCATCT
AATTGGACTGCAAACCACTCAGTTCAAACCATTCAGTTTTCATCTAATTG
GACTGCAAACCATCCAGTTCAAACCATTCAGTTTTCATCTATTTGGACTG
CAAACCATCCAGTTCAAACCTGTTCATTTGTCCGTCTATTTTGACTGCAA
TCCCCTCAGTTCAAAAACCAGTCACTTTTCCATCCTTCTGGACTGCCAAC
ATCCAGTTCAAACCGGTCAGTTCTCCATCTATTTGAACTGCAAACCCCTC
AGTTCAATAACTAGTCAATTTTCCATCCTTCTGGACTGCAAACCATCCAG
TTCAAAACCGGTCAGTTCTCCATCTATTTGGATTGAAAACCATCCAGCTC
AAAAACCGGTCACTTTTCCATCCTTCTGGACTGCAAACCTTTCAGTTCAA
GCCGGTCAGTTTTCTATCTGTTCGGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16660MSTRG.16660Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16660.6.p1.exon1MSTRG.16660.6.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16660.6.p1.exon2MSTRG.16660.6.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16660.6.p1MSTRG.16660.6.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:687327..688437 +