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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:377804..381756- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16645.1.p1 ID=MSTRG.16645.1.p1|Name=MSTRG.16645.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3953bp|location=Sequence derived from alignment at sc0000159_pilon:377804..381756- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATACAGAAAAATAATTTACAATAAATACAATAATGAGATTGTTTTTA
GCAGGTTGAAAAAAAATTACGTTAATTATAACCATGAACACATTGCATGT
TCTCCTAATTGTTGGTGGAATACTGACTCTGCAAAATGTGTCAGCTGCTC
CTGTAGATCAAACCACTGCAACAACTACAACAAAATCAGAAATAACGATA
CCGCCAAAGAGCACTCAAACAACCAATTCTTCAACTATTGCAGGTTGGTT
GTCAATCTCTCTATTTTAATATTATAATCAGAAGATCTTTTAAATAATAC
TATGCAATTTAATTCATTTTAGTATTCCAATTTACATGAGCTTTGGAACT
CAAAATCAGAACTTTCTGTTAATCATTAAGTTCATAACTCTGTGATTGTC
CGCCTTATTTTAAAAGACACTTTGTTTTTTTTACTATAGGGACTACAGTA
GCACCAAACAATGGAAAAAGACTTAAAACTGATTTCAAACACATTTCGAT
GAGAGCTATGGTTGTAGTAAGTACCGTGTGCGCCACAAAAAAGTTTCTCT
CTTTTAAACTAATATTCTCGAAATCTAAATTTTTTAAAAGAACCATTTCT
ATTTCATTGGAAAGAAGAAAGATAAACTTAAATTTTGATGCGTCATTTAT
TAAAATTCGAATCATTAGATCAAAAGTTATGTTCAATTGAATAAAAAAGT
TACTTTGAAAAAGTGCTTGAAAACGTTAAAAATAGACCTATCAAATTAAA
CAGAAGCATAATTACATGATACATCAGTATTTTCGAATCAGTCATTAAAA
AATGATAATTAGCTGTCGAAATAATCTTTTTTTATATAAAGGAAGGTTGA
ATTTCAATAAAAGGAAGAAAATTCGTCGAAAAAGGCCAAAAAATCTGGTA
AAATTCTTAAAAATACATCAAAATATGGGTTTCGAGGTTAATGCAGCCTT
ACATAAGACTTTTTCCGGTCTACAACCAAAAATCTGAGGAAAATTTCGGT
AAAAGTAAATTAAATTGATTTTGATGAATATTTTAAACTCTTGTTGACCC
TTCAGTTTCAAAATTTATGTGTTTAGTTACTGAAAAATGCTCTTAATCAT
GTAAAGGCTTTTGCGACTACCAAATTTGAAATAAAAATTTGATAGGTCAA
TTTTCAACGTTTCCGAGCACTTTCTGAAAGTAACTTTTTTATTCAATAAT
TGAGCATAACTTTCGATCTAATTAACCGAATTTAATAAATGACCCATCAA
AATTTAAGTTTTTCTTTTTTCTTTCCAATGAAATGGGAATGGTTCTTTTA
GAATTTTTCGATTTTGAGAAATTTAGTTTCAAAGAGAGAAACTTTTTTGT
GGCGCACCCGGTATATTTCACCTTTTTTTTAACACTGGGCTCTTCCAGGA
AAAATCCGTTCATGTGAGTGTCCAAGAGGTTAAATTGATGATTGTCCATG
GGTTTTAACCCATGTCCATGGGGTGAAAAATGAAAATGTCCAGGGATAAT
TCATTGAAAAAATAGTATATACTCCACCCCCTTTTTTCTGAGCTGTCTAA
TATTCTCTGCTAATCATTTGCATGATATTATTTATACTGATTGCTGTACT
CTTACAAGAGATGGGAAAATGTACGTTTATTTAGGTACACTAAAATTCAT
TTACATACAAACACCAATGAATTCAGAAAGATAATAGCATATAATTTTGC
CATCTTTAATCTGTGATTTACAGCTACAAAATGTTTTAAGAAATTATTAT
CTTTGTATTTTTCTAGGTAGGTGTGATATGTGCAGTTGTCATTCTCTACT
TTATCATACGTGCCGTTTGCTCTCGAAGGCGGCAAAATAGAAATAGAAAG
TAAGCTACTGAATATTATTATAATGGTAGCAAAATATGTGTGATGCTTCA
TATTACAAGTCTTACATTACATGCTTGGTCATATTCAATTTTATTTGACG
TCAAATACAGTCGCATCGCGAGAGCAGCAAAAAATGTGCACAATATGGCG
GAAATAACTGGAAAAATATACGAACGAAAATCCGAGGAAATTGGTTATTG
TACCCCATCAAGCTGCCTCATCCATGCAAACACAAATAAAAAGGACACTT
TACAATGCAAGAAATGCGAACGTCAAGTTCATTTGGCTTGCTCTGAGCTT
CCTCCTTATCAAATCCAGCTTTATCTTCAACACAAATCTAGAAGCTATCA
ATGTATGAGCTGTGTGATCATAACACCAGAATTGAAAAAGAAATTGAACT
TCAAGTCTGTTGGAGATTTACAAAAAGATATCGATGCATGTGAGAACATA
ATAAAAGCACAACGGGAGGACATTTCAAATTTGAAGGCTAAAGTGTCAAC
TAACAATGTGAATAAAGCAGTCGCAGAAATTGAAAACACCTTCAATAAAA
GAATTGACGTGCTGGAAGGCAAAATAAATAAAATCGCAAACAAAAAATCT
TCGTCTGTGAATGAAATTGCTTGTGAAAAATCAAGTTATTCAGAAATAAC
AAAGAAACATCTTGAGTCGCAAACGAAAACGATAAAGCGTTTCCTTGAAA
AAGAAAATAAGGATAAAAAATGGATTGAAGCGACTTTGTGTAATCTCATG
ATACATCATCTATATGAAACTACGGAAGACACGAAAGAGATAGCGGATAA
GAAAGATATCGACTACATAGAAAAACATATAATTTCAAAACTGAATATAG
GAGAAATCAAGGTAAAAAAATCAGAAAGAATCGGTACCCTAACACTTGAA
AACGAAGAGAAAAAACATTACCGTCCATTGAAACTTACATTTCAAAGTGA
GGAAGATAAAGAAAAGGTGCTAAAGGGGATCTGCAATTCAAGACGCCGTT
ACGAATTTAAAGCAACAGACGATCTGTCAAAAAACGAACGAAACCTCGTT
AAGGAATGGTGCCAAAAGGCAAAAGAACGAAATATGAAGAAGAACGATGA
CAGCTTCCAGTGGAAAGTCCGTGGAAGCCCAAGAACTCGACTTTATATGA
AAAAAGTACTTGTACAATAAGAATAAGAACTTTGTTACATTATAAAGATA
AACTGTAAATATAAATGAGATTATTTCATAGAGGTCAATAGACCTGCGAA
ATATACTTCTATAATATTTACATTTATCTATGATTTTGGAGTTCTAAGCA
ATGAATAAACACAGTATAATTTCCCAACGTTGATTTATCTTGATATTTCA
TATATATTTTTAATTTTGATTTAGTTTTAATGCTTCTTCCATAATCGTCT
AGTTGAAGCTATAGATCTTGTCGGAGTTTTTTATTTTTCTAAAAAAAACG
ATGCATTGTGGGATTGTTTCGGGGGTATTACAATATGACAATCTCTTAAG
AATTCCTCGAGGGAATTCTATTGTAATAGTAACAATCCCACAATGCATTG
CTGTTTTAGGAAAATCAAAAGCTTGGATAAGGTCTTGTTGTGTATTTGTG
ATAGCAAACAATCATTCATTAAGGGAATTCATTGGTCTAACTATCTATCT
AAAATTCTACTCCTTGAAGGCCACAGAGCAGCATTTTTGACTATTTTTTT
ATTTTTTTTAAGATATGGTATGCTGAGGGAGAACCGTGATGACCGAATGG
AGATGCGACCTCTATCTGAGGGTGACGATGATGACGATGATGATGACCTC
ACATTATTTGATGCTTCTCAAAGGAAAAGCAAGCGTTGAAGAAACAAAAC
TAAGACTTTAGATTTATGTTTTTTATCTGAATTGTTTTACGTTCATGATT
TTTTTATTGCTCGGGTGTATATTAATAGGAAATTAAGTCTTCCTTCCATG
TAAGGAGGTGTTCTTTACAGTTGTAGCTGGTTTCAATTACAGAAGAAACA
AAAATTGGCCTAAAAAGCATTTTTAAGCAGAACTAAGGACCCACCTTACA
TATGTAAAGTTTTTATTGTGACTCATATCAAGACAATACCTATGCAGAGA
TTT Coding sequence (CDS) from alignment at sc0000159_pilon:377804..381756- >MSTRG.16645.1.p1 ID=MSTRG.16645.1.p1|Name=MSTRG.16645.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1788bp|location=Sequence derived from alignment at sc0000159_pilon:377804..381756- (Clytia hemisphaerica_ch_hm2_pilon)
ATATGGTATGCTGAGGGAGAACCGTGATGACCGAATGGAGATGCGACCTC
TATCTGAGGGTGACGATGATGACGATGATGATGACCTCACATTATTTGAT
GCTTCTCAAAGGAAAAGCAAGCGTTGAGTAGGTGTGATATGTGCAGTTGT
CATTCTCTACTTTATCATACGTGCCGTTTGCTCTCGAAGGCGGCAAAATA
GAAATAGAAAGGACTACAGTAGCACCAAACAATGGAAAAAGACTTAAAAC
TGATTTCAAACACATTTCGATGAGAGCTATGGTTGTAATGAACACATTGC
ATGTTCTCCTAATTGTTGGTGGAATACTGACTCTGCAAAATGTGTCAGCT
GCTCCTGTAGATCAAACCACTGCAACAACTACAACAAAATCAGAAATAAC
GATACCGCCAAAGAGCACTCAAACAACCAATTCTTCAACTATTGCAGATA
TGGTATGCTGAGGGAGAACCGTGATGACCGAATGGAGATGCGACCTCTAT
CTGAGGGTGACGATGATGACGATGATGATGACCTCACATTATTTGATGCT
TCTCAAAGGAAAAGCAAGCGTTGAGTAGGTGTGATATGTGCAGTTGTCAT
TCTCTACTTTATCATACGTGCCGTTTGCTCTCGAAGGCGGCAAAATAGAA
ATAGAAAGGACTACAGTAGCACCAAACAATGGAAAAAGACTTAAAACTGA
TTTCAAACACATTTCGATGAGAGCTATGGTTGTAATGAACACATTGCATG
TTCTCCTAATTGTTGGTGGAATACTGACTCTGCAAAATGTGTCAGCTGCT
CCTGTAGATCAAACCACTGCAACAACTACAACAAAATCAGAAATAACGAT
ACCGCCAAAGAGCACTCAAACAACCAATTCTTCAACTATTGCAGATATGG
TATGCTGAGGGAGAACCGTGATGACCGAATGGAGATGCGACCTCTATCTG
AGGGTGACGATGATGACGATGATGATGACCTCACATTATTTGATGCTTCT
CAAAGGAAAAGCAAGCGTTGAGTAGGTGTGATATGTGCAGTTGTCATTCT
CTACTTTATCATACGTGCCGTTTGCTCTCGAAGGCGGCAAAATAGAAATA
GAAAGGACTACAGTAGCACCAAACAATGGAAAAAGACTTAAAACTGATTT
CAAACACATTTCGATGAGAGCTATGGTTGTAATGAACACATTGCATGTTC
TCCTAATTGTTGGTGGAATACTGACTCTGCAAAATGTGTCAGCTGCTCCT
GTAGATCAAACCACTGCAACAACTACAACAAAATCAGAAATAACGATACC
GCCAAAGAGCACTCAAACAACCAATTCTTCAACTATTGCAGATATGGTAT
GCTGAGGGAGAACCGTGATGACCGAATGGAGATGCGACCTCTATCTGAGG
GTGACGATGATGACGATGATGATGACCTCACATTATTTGATGCTTCTCAA
AGGAAAAGCAAGCGTTGAGTAGGTGTGATATGTGCAGTTGTCATTCTCTA
CTTTATCATACGTGCCGTTTGCTCTCGAAGGCGGCAAAATAGAAATAGAA
AGGACTACAGTAGCACCAAACAATGGAAAAAGACTTAAAACTGATTTCAA
ACACATTTCGATGAGAGCTATGGTTGTAATGAACACATTGCATGTTCTCC
TAATTGTTGGTGGAATACTGACTCTGCAAAATGTGTCAGCTGCTCCTGTA
GATCAAACCACTGCAACAACTACAACAAAATCAGAAATAACGATACCGCC
AAAGAGCACTCAAACAACCAATTCTTCAACTATTGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000159_pilon | genome | sc0000159_pilon:377804..381756 - |
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