MSTRG.16639.1.p1 (mRNA) -

Overview
NameMSTRG.16639.1.p1
Unique NameMSTRG.16639.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:308203..309567+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16639.1.p1 ID=MSTRG.16639.1.p1|Name=MSTRG.16639.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1365bp|location=Sequence derived from alignment at sc0000159_pilon:308203..309567+ (Clytia hemisphaerica_ch_hm2_pilon)
Ccaatatctttcaacaaatttgaaacttcatctttcgaaaattttggaaa
tttgtcgAAAGTTGATCTTCTCAACATCTTTCGAAAATGGAAAGACAAGA
TTTCGCCCAGTGTGAGCAAAGCGCCGCAGACGATGAAAGTAGATCGAACA
ATCATGATACTACAAGTGAGGCTGTTAGAGAATTCAACCTACATTTCCGG
AAAGAAAGAGAGGTTAGTTCTCAGTCAACAGATATCGAAGATTATGACGT
GAACAATAATTGTGATCCCTCCATCAGCAGGAGAAAGGTCCTGACAATAC
CTAATATTATCGTTGAAGCTCGTGATGAACCTGTAGACCAAAATGTTGAT
ATTAATCCTAGACCTAACGATAAAAGTGAAGAAACAAGTCTTTAAATGGA
TGATCATGTAGTTGCTGCTTGGCCTATACAAATTATTTATACTTATACTT
TTTTAAGGTCCTGATAACCCCCCACCGCATATTTTTACCCAATTGTATCC
TTTGTTTAGCTATTTGATTtcgaaatttataaaatttagtCTTTATACAG
GCGTTAATACTGTACAGCAAGCAACAAGGGAAAATTTCAATATCAAATTA
TCAAACATTTGGGAAAGAAATTGGGTaaaaaaaCGTGGAGGTCTCAGGAT
CGAAGCAGCTGTTGGATtggatgttatgttatgttatcttatctcaaata
aaaacttaGATTTAGTGTAGTTAGgttttattttagaattttaaagaatt
cgattcaaaatattatcatattcTCTCATGATGGATTCTCGGGTATCTGG
TACAATCATGCCCCgctgataaaaattttaaaacattttccacccaggac
attcttatccAATCGCCCAGCTTATTGTTTTtagggaaaatgtttttaaa
agttcccTTCCCTTCCTTTTACCCTAATTCTGTTGTaatagcctcctttt
caaaaattttccactcaggacatttttattccaaccccctcgcTTATcta
gttttgagaatttttgcaCCGatcctgcttattccaaaccccccgtttat
taggtacccgagagtaacttTAAGAATAATTTGCGTTTCTAATGAAATAC
TTTGTTAGTCGGTGTACTAAATGATTAGTTTTATGGGAATTTTTTGGTAA
CATaaaaggaaactttttgattatttttaagtCTTTGAATGAGTACATGT
TTTACGATACTAGACTAAGATCAATCAACACCAACAAATAGAACTAAACT
ATCGTAAAAGGGGTCCGAAAAACCACtctataagggtcgattttggCTAA
TTAATAACTGCCACCTTTATAACTTAGTGCCCTTTTCCCGCTCCCACGGT
TCAAGTGGGGTAAAC

Coding sequence (CDS) from alignment at sc0000159_pilon:308203..309567+

>MSTRG.16639.1.p1 ID=MSTRG.16639.1.p1|Name=MSTRG.16639.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=309bp|location=Sequence derived from alignment at sc0000159_pilon:308203..309567+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAGACAAGATTTCGCCCAGTGTGAGCAAAGCGCCGCAGACGATGA
AAGTAGATCGAACAATCATGATACTACAAGTGAGGCTGTTAGAGAATTCA
ACCTACATTTCCGGAAAGAAAGAGAGGTTAGTTCTCAGTCAACAGATATC
GAAGATTATGACGTGAACAATAATTGTGATCCCTCCATCAGCAGGAGAAA
GGTCCTGACAATACCTAATATTATCGTTGAAGCTCGTGATGAACCTGTAG
ACCAAAATGTTGATATTAATCCTAGACCTAACGATAAAAGTGAAGAAACA
AGTCTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16639MSTRG.16639Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16639.1.p1.exon1MSTRG.16639.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16639.1.p1MSTRG.16639.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:308203..309567 +