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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:252359..257570- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16635.3.p1 ID=MSTRG.16635.3.p1|Name=MSTRG.16635.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5212bp|location=Sequence derived from alignment at sc0000159_pilon:252359..257570- (Clytia hemisphaerica_ch_hm2_pilon)
TGCAGTACTGTCAGACAGGACATTGTAGATGCTATATAAAGAAATCCTAG
GGCATATCAAATGGGAAAGTATTCCTTGTTTGACTGCTGGACAAGACTAT
CAAGACACTTATGCATCTCTAGACATCAACAAAAAATTTCCGCTTTTCGT
TTCGAAGAGAGAGACTTGTATTAAGGTAAGAGCGTGTTCTTTTAATTTAT
GTAAACAGAGGCGTCTATTATAATTGATAATATCTTAGAACCGTAATGGT
GCTTTTCTCTCTTGTTTATGTTGGAGCCTTGCTTTAGCTGATGAAATCAA
ATGCCATAGACTAGTGTCTTAGTTCTCTTATTATCCAGACCACAAAGAGA
AGGGGGTGACTAGACGCTACCCTACTTTTCAATCATATGCTAATTTTCCA
GCACTTTCTCAATGCATTGAATTTATATTATGAAATTGGAATAAAAATTG
GAATGACTTACAATTGGTTTTTCCAGAAAAAATTCAATATTTTGGGGTGG
AGGATATAACATTTCGTGGAAATTTATCCCCCGGTAATTGTGACTTTTGA
CCCCCTGCCCATTCCGTCTAACCTGCGTCTAACCCCCCGAACAAGCATCA
GTTGACCCCTTGGACATTCAAAATTATCTCAAACAGAGCAAAACTACCCC
CGAGCAGAGCAAGTTTATCCCCCAGACAAGGCAAGTTTTTCAGACCTTCA
CTGCCCCCCTGACACTATATCCTTTACCCTCTCTTGTACGAACAATTTCT
TGAAGAGACCAATCCTGTTTTTTGTGATATTTTGGGTGAATTTTGAACGC
ACAAGCTTCGAAAACAAACCTAGTTTAAATCATCAGATCGAATTCCAAAA
ATCAATACAGTAATCTTGTTGTCATGGCAACCCTTTTACCAGATTGCAGA
AAAAATAATAAGTCTTTTTAATGGGTACGGTCATTTGCATTTCCGGCCAA
TTTCAAAAGTTTGAATTGGAATTACTGACATCTAGCTTTTTCAGTGTTTT
ATACTGTATACTGAGGGTGATTTTCATCAAATAGCTTGCAACCAAAAGCC
AATTATTTTCACCAAGAATAATTTCATCTGAGGTCATTATTTTTATCTAC
TTTGAGAAGAAATTTGAAGAATGTCTTCTTTTGCAAAAGCTATTTACAGG
TCTACTAAAATGTTTTGCAGAATAGTTTTTTATGTCATGCCAAAATATCG
TTACATAGATTTATAAAGCCCGAAGGGCTATGTAGATGTCATGCTTTGGC
TGAAAAGTGTGCTGTGGCTAGGTAGGAAATCCCACCTAGGTCATGTAACA
TTACAATTGAATTTCAGCGTTTGACCAATCAGAAGCTTCACGGGTTTTTG
AAAATAATAGCGATGCGATATCATATTCTTTTGCCTGCGATGGCTTAAAG
CACGACATCTAGCCCTTCGAGCTTTATAAATCTATGTATCGTTATCCCTG
TTTATCTAACAAATAAATTCACTAGCACAAGGGAAAAGTATAATGTCTTG
CAAAAAGCTAGAGCTTTGTAGCTGGCACACAACGTCGTTTCAACGTTCAT
CTAAAGTTATATAGATGTTGTGAACGTTAGATAAACGTTGAAAAAACGTT
GCGTGCCAGCTGGGTTGTAGCCACGTTTGGTGATTTTATTTTATAGAAGC
ATTCTTCAAGTCAAGGGAATGAGCACATTATGTAGGAACTTTTTTCATAC
GTATTGAATCTAGATTTTAACTAAATTGATAGATGGATGTCATTGTGGGG
AGCTTTACTTTGGCTAAAACGATTCTTTTTCGGTATGTTTTGATCAAATG
TGCCTCTTTGTTTCAAAAAACTTGCGAAAGATTTTGGAGATTATGAGTCT
GAAATGAGAGGATTAAAAGGGATATTTTAACTAATATTTTTTGTTATTTC
GAAAATTGATGTTAAGTGGTCTGTGTGGTCTAAATTATGCAATAAAACCG
ACATAAAACAAAAACAAAAACATTGAGGCATTGGAAATATTACTTAACAC
AATTAACACGAAGAACGATGTTTTTCATGTCATGTTTTGAGATTTTCAGA
AAAAAAAACATATGTAATAAATCAGGCGATTGTTTTGAAATCAACTGTTG
GATATATTGATCATTTCTGCTCACCATCAATAAATATAATTTTTCGTAAT
CGCAAAATATTTCTTACCAATATAAGACATAACCTGATTGTCTAATATTT
TCAAAACATTTTGAAACAGAATTAGAGATCTTTGGGAAGCAGACAGTGAT
AAATCAACATTTGGAATATTTCGTGGAAGTAGTTCAAAATCTTCACTCTA
TTTTGGTGTTCTTAAATGTGGGCGGGAGAAGTAAAAAACAGTAATTAAAG
TCTATTTTGAAAATGATTTTTCTATTTTTAAAATCTCGGATTTAAACATG
TCTTGTGACGTTTATTCCCCGTTTATTAAGCATTCACGAAATGGGAATGC
TCCTGAACTAGAGCGAGGCTTTTCCTCATGACAAATTTGACGTTCAATGT
TATTTTGAGCCTAAGAAAGATTCATCTATTCCCCCCTTACCCTTGTAATT
TTTTCATTTTCACCTCCTACTTCTTGGGACTTATCCAAACTCTAACTTCT
CCGGAGAAGTAATCATTCCCGTAAAATGAGAAACAAAGACACCCCCTTCT
CAGAGACCCACTTGGTCCCCTTTCCCAATGGAAAAATTTGCCAAAACATC
ATTTCTGCACTGAAAATAATCAAATAAACAGATCTTCACTGCAAAATATT
GTGCTATTGTTTCCATCCCCACTGAATTTTCTTTCCCACTTGAAAATAAT
GGAATTCAAATCCCCAGCCATAAAATACATGGAAATATCATCCCCCAACA
AGTTAAAATCCGTTATTATTAGCCTCGCGTGCTGAAAATAATTTACCGGG
TCTGTGAGAAGGGGTGCAACATTAATTTTGAGCGTCTTTTTCTAACCAGC
ATTGCCCTCCATATAACTTCAGATAACCGGGAGTCTGCTGTAATCTTTCA
AAATTAAAGAAAGCAAGAAGGGTGTTAAAGTTTTCTGGATTAGACACTCC
AAAAACCTATTATCGCTAGTTACCATCTTAGGTCTAAAGCCACTCCTTTT
AGGTTCTTTACGTGCTTTATACACTAATAATCAGATCCTTCAAATCTGTC
ATGGACCATCGAATATTCTCAGGAAATATTTCATCGTTTTGTTGTTTTGA
CTAAATGAATGGTATTTGACGTCCTTGGGGGGTCACTTCATATTTTAACA
AGAGGAAAGGAAGAGGACTATTTATCCGCGTGAAGAAAGCACTTCAAAGG
CATTGACATTTTTCTTGTTTATCTAACAGAGATGTCCTATTCATCAATTA
CGTGAGGGACTGGGTATGACTTTTTTTCTTTGCTTTTGTTCCCGACAAAA
CCCATAAAGGAACTAGTACCGTTTGAAAAGAAGGCAGTCATTAATTTTTG
TAGCGAACTAAAGGAAGCTAGATTTTTGTCGCATATTCTTGATTTTTTGG
ATCTAATTACTCAGGTATGTTTGATATGCATCTAATGTCTAGCATTTAAT
AGATTGTCGCGTACTCTTTGAGAAGATTCTCTTTAGATGATCATTAAAAG
ATTTTTAATTACATTTTAATTCTTAATGAGGTGTTTAAAGAATGTCTAAT
TTAGCAGACTTTGGTCGCGCATGTAGCTTTAGTATGACAGTCGAAGCTAT
TTTTTCTTCTTGACACAATTCGAAGAATGATAATAGCTCTACCGGACATA
ATAATGGTTCCAATGTCATCATACTTCGAATTCCTGGTTTTCAAACTCAT
TAATCAACTTTTATTGTATGTTTCTATTGTTTTAATAAACATTTGTTTAA
TTGTATCTATTGTTTTCTTAATATAAATAGGTCGTGTTTATCTTGTCAAC
GCATCATTCAAAAGATTGCACTCACGAAGTAAACAGCAAGAATTCAAATC
AAAGAACTTAATCAACAAACGATACAAACTTCAACAAAGATGAATCAATT
ACAACTCTTATGTCTGGCAATCCTCTGCACTGTCACATTTGCACGATATG
CACCAAGTTACCAAAGATGTGAACCTGTACGTGTTGAAATGTGTAGAAAC
CTGGATCCAAAGAATTGGGTTCGAACCTCGTTCCCAAATTTTATGAACCA
TTCATCATCCATTGTTGCTGAACGAGAACTTAAACAATATTATGACATCA
TTGATTCCAACTGCTCGCCATACCTGACAACTTTCTTATGCTCTTTATAT
ATGCCAATCTGCAAAGCTGGTATTGGTCGTATCCCACCTTGCAAATCATT
ATGTCAAGCAGCACGCTCTGGATGTGAACCATTGTTGAATTCAGCTCACA
TCAGATGGCCTTATTCCATGAATTGTGACCAATTCCCAGACAGTGGACAA
CTTTGCATTGATTTACCAGAAACAGCACCAACACCAAAGGCTCTGGATGA
AGTTGAAGCTAATCAAATCCCTTCTAAAAGAACAGTCATCAAGAAAGGTG
AGAATACTTTTCGAACTTGATTTTACCTTTTTACTGCTGAAAATACCATC
AGATTGCAATTTTCTTGATTCCAGTTTACTGACTTAAGGTGATTTGGAAC
TTTTTAATCATATTTTCTTTAAACAATATCTAAATCAAATCTTTTATTTT
CACAGATAAATTACCATCAATCGCAAAAAAGGATCTGAAACCATTAGAAG
AAGTCGTTCTAGAATGTCCACCTGATAAACAAATCATGGTCCGTAAAATT
CGTCATTTTCCAGAACGTAATACTGATTGCTGCCCTGTAGACTCTAAAGA
AAAGATCTCAAGAGGATGCAATGGTAAACAAAAATGTGAAATCATCTTAG
ATGAAAACGTCATCGGACATGGTTGCGTAACATCGATGGAGAAAACTTCC
GTCAAATATAAATGTGTCGGACTTCAGCATAACGTCAAGACGCGTAAATC
AATTGGGTGTCGGAAAAACAATAAAAATGGTATATAGAAACATATTTCAA
TAGACTTATAATTGACTATGAGACATACCCAAAAATGAAAGAATTATTCC
GACTGCAGCGAGACCAACGCGATGGTTTTCACACTTTATTTATACACTAA
ACATAGATTTTATTGAAAAAATTTAATGTAAATTTAAGTTATAAAGAGTT
AAAAAATTTTAACCTGTTTTTCTTTCTGTTATTAGTTTTTTTATCATTTA
TCTTAATTTTAA Coding sequence (CDS) from alignment at sc0000159_pilon:252359..257570- >MSTRG.16635.3.p1 ID=MSTRG.16635.3.p1|Name=MSTRG.16635.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1680bp|location=Sequence derived from alignment at sc0000159_pilon:252359..257570- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAATTACCATCAATCGCAAAAAAGGATCTGAAACCATTAGAAGAAGTC
GTTCTAGAATGTCCACCTGATAAACAAATCATGGTCCGTAAAATTCGTCA
TTTTCCAGAACGTAATACTGATTGCTGCCCTGTAGACTCTAAAGAAAAGA
TCTCAAGAGGATGCAATGGTAAACAAAAATGTGAAATCATCTTAGATGAA
AACGTCATCGGACATGGTTGCGTAACATCGATGGAGAAAACTTCCGTCAA
ATATAAATGTGTCGGACTTCAGCATAACGTCAAGACGCGTAAATCAATTG
GGTGTCGGAAAAACAATAAAAATGGTATATAGATGAATCAATTACAACTC
TTATGTCTGGCAATCCTCTGCACTGTCACATTTGCACGATATGCACCAAG
TTACCAAAGATGTGAACCTGTACGTGTTGAAATGTGTAGAAACCTGGATC
CAAAGAATTGGGTTCGAACCTCGTTCCCAAATTTTATGAACCATTCATCA
TCCATTGTTGCTGAACGAGAACTTAAACAATATTATGACATCATTGATTC
CAACTGCTCGCCATACCTGACAACTTTCTTATGCTCTTTATATATGCCAA
TCTGCAAAGCTGGTATTGGTCGTATCCCACCTTGCAAATCATTATGTCAA
GCAGCACGCTCTGGATGTGAACCATTGTTGAATTCAGCTCACATCAGATG
GCCTTATTCCATGAATTGTGACCAATTCCCAGACAGTGGACAACTTTGCA
TTGATTTACCAGAAACAGCACCAACACCAAAGGCTCTGGATGAAGTTGAA
GCTAATCAAATCCCTTCTAAAAGAACAGTCATCAAGAAAGATAAATTACC
ATCAATCGCAAAAAAGGATCTGAAACCATTAGAAGAAGTCGTTCTAGAAT
GTCCACCTGATAAACAAATCATGGTCCGTAAAATTCGTCATTTTCCAGAA
CGTAATACTGATTGCTGCCCTGTAGACTCTAAAGAAAAGATCTCAAGAGG
ATGCAATGGTAAACAAAAATGTGAAATCATCTTAGATGAAAACGTCATCG
GACATGGTTGCGTAACATCGATGGAGAAAACTTCCGTCAAATATAAATGT
GTCGGACTTCAGCATAACGTCAAGACGCGTAAATCAATTGGGTGTCGGAA
AAACAATAAAAATGGTATATAGATGAATCAATTACAACTCTTATGTCTGG
CAATCCTCTGCACTGTCACATTTGCACGATATGCACCAAGTTACCAAAGA
TGTGAACCTGTACGTGTTGAAATGTGTAGAAACCTGGATCCAAAGAATTG
GGTTCGAACCTCGTTCCCAAATTTTATGAACCATTCATCATCCATTGTTG
CTGAACGAGAACTTAAACAATATTATGACATCATTGATTCCAACTGCTCG
CCATACCTGACAACTTTCTTATGCTCTTTATATATGCCAATCTGCAAAGC
TGGTATTGGTCGTATCCCACCTTGCAAATCATTATGTCAAGCAGCACGCT
CTGGATGTGAACCATTGTTGAATTCAGCTCACATCAGATGGCCTTATTCC
ATGAATTGTGACCAATTCCCAGACAGTGGACAACTTTGCATTGATTTACC
AGAAACAGCACCAACACCAAAGGCTCTGGATGAAGTTGAAGCTAATCAAA
TCCCTTCTAAAAGAACAGTCATCAAGAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000159_pilon | genome | sc0000159_pilon:252359..257570 - |
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