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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:231161..236076- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16633.1.p1 ID=MSTRG.16633.1.p1|Name=MSTRG.16633.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4916bp|location=Sequence derived from alignment at sc0000159_pilon:231161..236076- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTTAGTTATTTGTCACAGGCAGATGTCACTTGTCAATATATGTCATT
TTTTTAGCGAAGTTTTAGGGTATTTCTTTCATTTGATCCCTTATTCGTCA
ATCTTTTGGAATTTTAGTATGATTGTATCATGAAAATTTTTACACTGATA
ATGTTTCAGACATTTGATATTTTACATGGATGTCGGAACCGCTATGTGGA
TAAACCGTGCTGGCACGGGTTTTATGAATTTTTCTTTTTTTTCTTTTCTT
GTCCCGTTTCATACCATTCCGTGACCTTTTTGTGATATCCTTGATTTAGG
TATTGGTGTGGTTCAATGGTTTTAGAAGGTATTCATAATTAATTATTGTA
GTTTTCTTCAATTCACGCAATCGCGTGAATTCTTTTCGAAATTTACGCAT
TTATCCTTTTTTTTTCGAAATTCACCCGATTTCTGTTCGCGCAAAGTTTT
CCAATTCACGCATTCATGCAAACCTCTGAGGGGAGGGATCTTTTTAGTTG
GCGGATGATTCAGGATTCTGAAATTAATATCTGTAATTCTGTAGCTCGGG
AAAAATTCTGACCCATTCCATTCAGCAAAGTTTCATAAACCACGTGGTAA
CACTCTGCTGTTTTTTTGTCACTCTCTGAAGGACTACCCATAATATATTT
ATACTTTTATCTTCTTAAAATGGAAACAAATAAATAACAAGTGGCTGTGT
TAATCTTTTCCTGTCCCGTGTTTTTCTTCCGGTGAAAATGTCAGAAAATA
ATTTCCTTAGCTTCCTTCTAGCGATTCGATAAATTTAAATATTAGCGATT
AAAACTCTGTATTCGTATTCGTGACAAAAAAGCATCAGTTTATTGATGTA
GAAAGGATCCTCTTCAAAAGTTTTCAAGGTTATTACTTTTATTGATTTCC
ATTTAGGTTAGATTCAAACAATAAACACAATGAGTCGCATGGAATGGCTT
GCAATTTCGATATTGCTTTGTCAATGTGTTTCTTTGACAACATCATATCG
ATTCATTGCAATGAACCAAAGACGATCACCACAATGTGAGAGAGTAGAAT
CTCTTACATGTTTAACCAAAGTTGGGGAAGGTTATAACTCAACCATGTTT
CCTAACCACCTTGGACACTCTACACAGAAAGAAGCACTAGCAGAAATGCG
TGATTTTGAAGTTCTCATTGAATCAGGCTGCTCCAAATATTTAAGCACAT
TTTTGTGTTCTCTTTACTTCCCAATTTGTACACCTGGATTAATGACAACA
GTGAAACCTTGTCGTAACTTGTGCGAGAAATCGAAAAAAGGATGTGCTCA
TATTGTCCAAAAGTACGGATACGAATGGAAATTCAACTGCACACAATTCC
CAGACCCGGCCACAAGTGGAGAGATTTGTGTTGGTGCAACAACAGTTGAT
GCTAATCAAGTAGAGGATAAAAGCGTAGCCAAGAAAGAAAAGAAAACCAA
GAAGAAGGGTAAGAAAGAATTACAAATAGTTTTGTCTCAAAGAGTATTAA
CTTCAATATCGTCAGAGCTACATTTTAAATTAAGCTTTCTTCTCAGCTCC
CAGTAAAAAGATTAAAGATAAGCCGTTAAGATATCCTTCCATAGGTGGGA
ACCTAATGAGATAAAAAAGTATGGAAACGTCTACAGATGTATGATTGTTT
GATTACGCACGCTTGACGTGTTTTTCGAATTCATCATATAAATATTCTTA
ACTTTTTGGGAAAAATCATCCTGAAATATTCTTACGGTATTCTTAGGTTT
TGATCCAAACCCAGCCAAAATCTAGTTTGTAATAGATACCTCAAGCAAAA
ATTTTGTATCTTTGTGGAACCTTTAATATCGGCCAAGTTCATCATAAATG
TTCTTATAAAATAAATTCTTATTAAAAAAGCGTGTAATACTTTTTGTCCT
TCTTTTTTAGCTCGAATGGCTGGTGGTTCTGAAAATGACATTCTTGATAT
AACTTGTCCCCGAAACAAATACATTTTCGTTCGAAAAGTCATGCATTTTG
GTGACTCAACGTGCTGTAAGGTTGCATCCAAAGCTGTCTTGACCGCTTTA
TGTAATGGTAAAAGGCATTGTAAATTCACTGTCGCCCCTGAGAGTCTTGG
AGGACATTGTGAGAAAGGCAGAACAGGACAAATCATGGTCCGTTATCGAT
GTACAAGTCATAAAGATAAGAACTGCTCACAACAAAATGCCATCCCACGA
AAATCACGAAAAAATACCAGTTAGATAAAGGAATAGCACTAATCGGTTAA
TTCGAAGAAAACTTGTGTGTCCTTTTCTTGTGTAAATAGTATATCAATAG
TCTGAGAAGTTTTTGCCGTGTTTTTTGGCAATTTAACAGGCCTAGACCTT
TCTAAACTACCAGTAAGTCTAGCGCAACAGAGAGCACCGTTTAAGTTTTC
TCAGGCTAATACAAGCATTAAGACAAATCTTGGTAGGGTTAGAAACGCCC
GATTTCCGAAACTCGAACCTCTGATGATTCTACAGAGACTTGATTGTGTA
GATAACCTTCAAAATTTAGTATAGAGGTACAAACCTTGGCAAAAATTTTG
TTTTAAAATTGCCATTTTTTAAAGTGTGGAATTTCTTAAAGTTTTATTAC
TTTGATACAGTGTTCCGCGACAAGGTATACTCAAAAACTAACTTAAATTT
TAGATTAGCTGAAGGCGCATTCAACGTTCTACGGTGAAAATTTCATTGCG
AAAAAAGTCTTTGTTTTAGAGATATGAAGCTTTAAGCACACTAAGTTGGA
GATGAAAATAGTCGAGATTGTAAACTTTCAAAGCAAAAAAAAACTAATTG
ACTTTTGATTGACAGCTCTTTTTTATGTCATTTTGATGAAACCTTACTTT
TTCAGTATACGTTTTTCCGGAACACACTATAGTTTTTTATTTGTTTTTAA
TATATAACTTTGATCGTCATTTTGATACATTTTTTACAGATATTTTTTAA
TATATTTGATCTATTCAAAGAATTGAAGTCTTAAGTTAGAGACCTCAGTT
TACTCCCTAAGGCTCGCCAAAGTAAGGGAAGTAAAGTTATTCTTTTTGCC
GCCCCTCTTTAATTATGCATTTGGGTGATATAGGAATGATAGACGTATTT
TCCTGTTAGATTCAATCTGTTAGTTTTACCTGATGATTATGTTGCTAATT
AGATGCTTTTGATATTGCATCTTAATTAGTCCCAATTAATCTGTGGAATT
TTGATTGAATTACAATCTGAAACTCTCATAGAAAAAAAGGCTTGTCCGCT
GTTGCACTTTTTTTAATTTCTTGCATAAAAGTAAGACTTAGCCAAAAAAA
TCGAACTATTTTCTGCTATACTGCTGGTGATATTAGCTAGATTACAAATA
CACAACCCTTTCTCAAGATTTCTAAGTCAATCAAAATACGTGCACAGAAA
ACTGTGCTAGGTTTCTCCTGCAATCGGCGCCGAAATATATTGGCACTTTT
GGGTATTTTAACGTTTTTCAGAATTTAAAGATCGGGCGAGAATTGCAGTT
TCAGTACTTCCACTTTGTTTCATTGGATTTTTCGATTTGGGAGGGGTTAC
TAGTAAGTGGATTCCAGGCTATACAGGCTATCTGGTATTTTCAGCCTCAT
TGGAACATTTTTGAGCTTTTAGATCCTGAGATCTTAAGGTCCTAAGTTTT
AAGTCTCATGTTAAAACTCAAAGTTAAAACTATACTTTCTAACCGTACTT
GTAAGAATGTAAGAATGGTCGAATAATTTTTTTTATAAGAACATCAAAAA
TTTTCTCAGCTTTTTGACTTTTAAGCCTAACAATGTTCTTAACCCTTTAA
GTGCCACGGAATCAAGTAAAGCAGGGCCAAATTTGGAGGTTCTTGGATGA
CTCGTTGACCAAAAATGGTCAAAAAACGGTCAAAATCTTAAAAAAGTGGA
TTTTTATCAAATTTTTGTATTTTTTGACTTTTTGGCTTAAAATCTCGCTA
GAAAAACTAATTTTTGATTTTTTTGCTTGACCATGAAGCACAATCCAATT
CCTACGAGTTAGACAAAAAATGACGATTTCTAACTCAAACTGGGAGGGCT
TCACCCTCCTACATAGCCCGGGTCTGATATATACGACATTGGCACCTAAA
AGGGTTAACTTGTTCTTAATATTTTGGTCATGGGAGCCTTCTTATATAGT
TTGTTCTTATTAAAAAAACATACAATGCAAGTCCGAAAATGGTCATAAGG
TTTTTTTTGGATTAAATTATTTCATTTTTCTGTTGATTATCAAAATTATA
AAATTTCCTAGTTCTACTGTTAGATATTAACAAAAAGTGTTTTCTTTTTA
AAAAGTTTAGCATAAAAACGAAATAAAAAGCCCTGAAATGTGTTTTCAAT
ATGAGTCAATGAATCAATTTTAGAGAGTGCTTTTGGTATATTATTGTCAA
TAGTTAGTTCTGAATCAACATAGTTCGTATCTGAGAATACTCTTAAACTC
GCCTCTTGTCCATCGTGTCCATCGTCCATCGTCCATTAATTAACGAGTAT
TCGAGATAAATTGAGTTTACATGTCTCCAAAATCACCGTCCACTTTGCTT
GACGACGGTAAAAACACCAAAATACCGTCGTCTGTTTAGGTGAGCAAAGG
CGAAATAGAGCCGTGCATCAACTATCGACTTTGTTTTGTGATCGATTTCA
CTTACCGTCGCCCTCGATATCCTCCGATACATAAACTCGGTATTGTATTG
CAGGTTAGTGCTATCAAATTAAGAATTAACTATAGTTATATCAAATTCAC
TCAAATTCTGTTGCTTTTAAATTCTTTTTTACTGTCAAAAGTAATAAGTG
GGCATATAGGTTTGACGATGTAACGGTATAAACATTTTTTATGTTGGTGT
TTCGGTATTTGAATATAATAATGACGTTATTTCGGTGTCAAACATGCAGT
AACTAAAAGGATTTAG Coding sequence (CDS) from alignment at sc0000159_pilon:231161..236076- >MSTRG.16633.1.p1 ID=MSTRG.16633.1.p1|Name=MSTRG.16633.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1686bp|location=Sequence derived from alignment at sc0000159_pilon:231161..236076- (Clytia hemisphaerica_ch_hm2_pilon)
CTCGAATGGCTGGTGGTTCTGAAAATGACATTCTTGATATAACTTGTCCC
CGAAACAAATACATTTTCGTTCGAAAAGTCATGCATTTTGGTGACTCAAC
GTGCTGTAAGGTTGCATCCAAAGCTGTCTTGACCGCTTTATGTAATGGTA
AAAGGCATTGTAAATTCACTGTCGCCCCTGAGAGTCTTGGAGGACATTGT
GAGAAAGGCAGAACAGGACAAATCATGGTCCGTTATCGATGTACAAGTCA
TAAAGATAAGAACTGCTCACAACAAAATGCCATCCCACGAAAATCACGAA
AAAATACCAGTTAGATGAGTCGCATGGAATGGCTTGCAATTTCGATATTG
CTTTGTCAATGTGTTTCTTTGACAACATCATATCGATTCATTGCAATGAA
CCAAAGACGATCACCACAATGTGAGAGAGTAGAATCTCTTACATGTTTAA
CCAAAGTTGGGGAAGGTTATAACTCAACCATGTTTCCTAACCACCTTGGA
CACTCTACACAGAAAGAAGCACTAGCAGAAATGCGTGATTTTGAAGTTCT
CATTGAATCAGGCTGCTCCAAATATTTAAGCACATTTTTGTGTTCTCTTT
ACTTCCCAATTTGTACACCTGGATTAATGACAACAGTGAAACCTTGTCGT
AACTTGTGCGAGAAATCGAAAAAAGGATGTGCTCATATTGTCCAAAAGTA
CGGATACGAATGGAAATTCAACTGCACACAATTCCCAGACCCGGCCACAA
GTGGAGAGATTTGTGTTGGTGCAACAACAGTTGATGCTAATCAAGTAGAG
GATAAAAGCGTAGCCAAGAAAGAAAAGAAAACCAAGAAGAAGGCTCGAAT
GGCTGGTGGTTCTGAAAATGACATTCTTGATATAACTTGTCCCCGAAACA
AATACATTTTCGTTCGAAAAGTCATGCATTTTGGTGACTCAACGTGCTGT
AAGGTTGCATCCAAAGCTGTCTTGACCGCTTTATGTAATGGTAAAAGGCA
TTGTAAATTCACTGTCGCCCCTGAGAGTCTTGGAGGACATTGTGAGAAAG
GCAGAACAGGACAAATCATGGTCCGTTATCGATGTACAAGTCATAAAGAT
AAGAACTGCTCACAACAAAATGCCATCCCACGAAAATCACGAAAAAATAC
CAGTTAGATGAGTCGCATGGAATGGCTTGCAATTTCGATATTGCTTTGTC
AATGTGTTTCTTTGACAACATCATATCGATTCATTGCAATGAACCAAAGA
CGATCACCACAATGTGAGAGAGTAGAATCTCTTACATGTTTAACCAAAGT
TGGGGAAGGTTATAACTCAACCATGTTTCCTAACCACCTTGGACACTCTA
CACAGAAAGAAGCACTAGCAGAAATGCGTGATTTTGAAGTTCTCATTGAA
TCAGGCTGCTCCAAATATTTAAGCACATTTTTGTGTTCTCTTTACTTCCC
AATTTGTACACCTGGATTAATGACAACAGTGAAACCTTGTCGTAACTTGT
GCGAGAAATCGAAAAAAGGATGTGCTCATATTGTCCAAAAGTACGGATAC
GAATGGAAATTCAACTGCACACAATTCCCAGACCCGGCCACAAGTGGAGA
GATTTGTGTTGGTGCAACAACAGTTGATGCTAATCAAGTAGAGGATAAAA
GCGTAGCCAAGAAAGAAAAGAAAACCAAGAAGAAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000159_pilon | genome | sc0000159_pilon:231161..236076 - |
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