MSTRG.16630.1.p1 (mRNA) -

Overview
NameMSTRG.16630.1.p1
Unique NameMSTRG.16630.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:202315..204230-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16630.1.p1 ID=MSTRG.16630.1.p1|Name=MSTRG.16630.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1916bp|location=Sequence derived from alignment at sc0000159_pilon:202315..204230- (Clytia hemisphaerica_ch_hm2_pilon)
TGATTATACCAGTGCTACTGGCAAATTGAACTTTTCAATAAACCTTTCGC TGATTGGCTTAAATCGTTTCATTAGCTCTTTATAAACATTAAAATGTATT ATTTGTTTGAGATTTTGCAAAAAATTTCTTCTTGACACTAAAGACAGCAG GTATTAAGCGAGGAGTATAATTATAATAATTTTTCTGGAAATAATAAACA GACGAACAAAGAAGCTGAAGGAACTGTATCATAATGAAATTGTTCTGTAC CGTCGTGATTTTTGGGCTACTTTTAGCCACAAATGTTCTTGGTAAACCCA AACATCATAAGAAGAAAGCTGACCTACCAACCACTGAAGATGAACATTTG AAGGGATCTCCTCCAGAATCAGAAGACAACAACAACTTCCAACAATTGAC CAACGTTGCTACTTCACAGGCTAGTCCTTACAACGTTCCTGTAAACGCTG ACATTCAAAATCCAATACCAGAAGACGAAGGTGAAAACGAAAATGAAGTT GAATCAGCCTCGGAGAAAGCTGGGAAACGTGTTGTGGAGCCGGTATCTGC GTTCACCACAGCAATGATCAGCTCTGCAATCTCAACTGGTACTTCCCTTG CTGGAACTACTGTTAGCGCAATGATGGCACCAGGTTATAGTGTTGCAGCT GCTGGATCAATAGAGAATTACTCTAAATGGGCAATGCATCTAGAACGTAA TGGTTGTGATGTGATGGGTGGAACAGTGAATAAACCAATGCGATCAATCA GCCCTGGATATAAAGAAGCCTTTGCATCACATAAAACTGGTCACTCAGCT ACAGGAACTCAAATCTTCTGCCCATTCAGAGTTAATGGTAAATATCGTGT CATGTTTATGTATTCAGTCCCATACAACCAAGATTTCTTCTCCAACTATC TCACTGTCTCTATTTGTGAGCTCGACAAAAGTGCTTGTGGCAAAATGCAT GGCAATGATCTCTATCATATCCGCTTAGAATACGTCGATGTTGTTAATCG TTATCTTGACTCGTTGAGCGATGAATCAAGGGAATCGACAGACATTCCCA GAGTTGCCATGGATCGCCACGAATACTATCGCACTATTCGATCAGTTAAA GCTTGTTTGGGAGATATGTGTTTCGTAGGTGAGATGGGGAGCAGCCACAA ACCAACAATTTCCATGCGATTGATGCCTGCAAAATACGAAGGTTTGACAT CAGCAGTGAAAGGTAAATCCCATACGGATAACTGGACCAAAAAACAATAT GAAGATTATGTCACCCATTTATAATTTTTTAAGAAGAAACTTTTGTTAGG TCTCGTTTTATTCTTTATTTCAAGACTAACAATATAATGGTCCCTGTTCA TGACATGCGTAAGGCTGATTACCTCTCCCCGGGAGGGGGGACACTTAGGC AAAATTGGGTACGGGGACGTGCCGCTGGCAGGTTCCCGTTTTTAGGCTCT GAAGATATCTGACAGGGTCTTAAATTTACTGATTTTCAAGATGTCTATCT GACTGGGTCGAGTTTTGATAATTTTTGGCAATTTTCTGGGTGGTGTGATG ATGATGATCTAAGATTGAAAAATCACTCCTGTTAAAATGGTAGTTATACC ACATTTCTACAAGAAGTTTATTTTTTTTTTCTTCATTTTTCATTTTCATT TTATGTTTTTTTCAATTTTTTTTTGCTTGATAATATTCCACTGACAAATA TCTTTTCAACGAGCACAAAATCGCAACTTGAATCGAATTCTATCAAAAGT TACAGCCATTTTTGTCTCAGCTGCAAATTATTTTGAGACAGACTTTACAC AATCTTATTTACGCATATGTCATGAATTTAATCTTTTTATTTTGTCTCAT TCATTGATTATTTCATTGATATTTTAAGAATATACTATGAATATATGAAA AAAAAATTGCTTTAGA

Coding sequence (CDS) from alignment at sc0000159_pilon:202315..204230-

>MSTRG.16630.1.p1 ID=MSTRG.16630.1.p1|Name=MSTRG.16630.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1041bp|location=Sequence derived from alignment at sc0000159_pilon:202315..204230- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTGTTCTGTACCGTCGTGATTTTTGGGCTACTTTTAGCCACAAA
TGTTCTTGGTAAACCCAAACATCATAAGAAGAAAGCTGACCTACCAACCA
CTGAAGATGAACATTTGAAGGGATCTCCTCCAGAATCAGAAGACAACAAC
AACTTCCAACAATTGACCAACGTTGCTACTTCACAGGCTAGTCCTTACAA
CGTTCCTGTAAACGCTGACATTCAAAATCCAATACCAGAAGACGAAGGTG
AAAACGAAAATGAAGTTGAATCAGCCTCGGAGAAAGCTGGGAAACGTGTT
GTGGAGCCGGTATCTGCGTTCACCACAGCAATGATCAGCTCTGCAATCTC
AACTGGTACTTCCCTTGCTGGAACTACTGTTAGCGCAATGATGGCACCAG
GTTATAGTGTTGCAGCTGCTGGATCAATAGAGAATTACTCTAAATGGGCA
ATGCATCTAGAACGTAATGGTTGTGATGTGATGGGTGGAACAGTGAATAA
ACCAATGCGATCAATCAGCCCTGGATATAAAGAAGCCTTTGCATCACATA
AAACTGGTCACTCAGCTACAGGAACTCAAATCTTCTGCCCATTCAGAGTT
AATGGTAAATATCGTGTCATGTTTATGTATTCAGTCCCATACAACCAAGA
TTTCTTCTCCAACTATCTCACTGTCTCTATTTGTGAGCTCGACAAAAGTG
CTTGTGGCAAAATGCATGGCAATGATCTCTATCATATCCGCTTAGAATAC
GTCGATGTTGTTAATCGTTATCTTGACTCGTTGAGCGATGAATCAAGGGA
ATCGACAGACATTCCCAGAGTTGCCATGGATCGCCACGAATACTATCGCA
CTATTCGATCAGTTAAAGCTTGTTTGGGAGATATGTGTTTCGTAGGTGAG
ATGGGGAGCAGCCACAAACCAACAATTTCCATGCGATTGATGCCTGCAAA
ATACGAAGGTTTGACATCAGCAGTGAAAGGTAAATCCCATACGGATAACT
GGACCAAAAAACAATATGAAGATTATGTCACCCATTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16630MSTRG.16630Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16630.1.p1.exon1MSTRG.16630.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16630.1.p1MSTRG.16630.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:202315..204230 -