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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:93584..100118- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16622.2.p1 ID=MSTRG.16622.2.p1|Name=MSTRG.16622.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6535bp|location=Sequence derived from alignment at sc0000159_pilon:93584..100118- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTTTGATGGAAGTTGTCTAAAAAACTACTCAAACTGGCACTTGTAT
ATACAACGTTTTCTATTTCTAAGGTCCTTTTCTTTCAAAGTTATTTTTTA
AATTAGTTTGAAGCTTGCATTAGTTGAATTTAATTCTACTTTAGCTCAAA
AAATTTGCAACTGAAAGACATATAGGCAACCCCTACACCAACAATATCAT
ACTCCAGGATACAAATGAAATTTTTCAATTTCAGAACTAGATGCCCCTGT
TTGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCGAGAGTCAAAATATA
AGGCTGAAAGCCTTCTCAGGGGCATTTGTATCCTTGTAGGGGCACTGATA
GGGTTTGGAGCTTTGTTAATTAAAAGGTCTGTAAATTACATGCTATAAGT
ATTTTTGTGAATGACAGCATTCTGCCGTGTCACGTTGGCGCAATCTGTTA
GGCATTGGGTTTATAAACCAAGGTTGCTTGCATTTGGTGGTTCAAGCTGA
GGTAGGAGACCTATTTCACTGCAAATTTCAGAAAAATTCTTAGAAAACAG
TTAGAAACACTTGAGAAAGTCAGAAAATCAGGACAGAAGTCAGAAGATAG
GAAAGTAGAAAATAGGGGAAAATAAGAGACAATGCATCTTGGAGTATGAT
ATCGTTTGCCAACCTACACTGTACAGGTGTACTGTCACCTTTTATGGAGA
TAGGAAAGAAAGAATTTAAGGTAGGTGTGGGAAGAATCTGATTAATTTTT
TTTTACACCAGTTTACACTGCTAAAACATAATATTATGATACGAAAGATG
GTTTTGGTAAACCAAAATCTTTCTTGGAAATAAAAAGCACTTTCAAATTT
AAATTAAGACTCAGTGTTTTACAATAAATCTCTCTTGGTTTCTCTTATCA
AGACGAGGAAGCTTGAATTTTTTTTTTGATGGTAATTCATTATTTCTAAA
TACCACAAATCACAGCATCAGCTGTAAGCAATTTATCATGATTAAAGGAG
TGTGTGAGGTAGATAATTAGAAATTTCTCTACAAAGTCTTTTAAAATTTG
TATACTTTGTGGTGGGGTGTTAAGCTTTATATTTCCAATGTCAGATTGTG
CTGCTCAACATTCCATTACATTCCAGCTAGGTTGACAATAAATTATTTCA
AGAAATAAAAAGTACATACTTACATTTTTATGACTTCTTTGTGTTTAGCA
GAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAAATTTTCT
TCGAGCACAGGTAAAAATTTATTTCAAGTAGTTTTTCAACAAAAAGGCTG
TTTTTGTAACTTTTTGAGTACAAAAGTTTAGCAGAGTTATTGTTAACCAC
ACTTTTACTTTTTGAAAGACAGTAAAAAATGTCTACAATATACAACTGTT
AAGAGTAAGTTTTCATAATATTCTTATTTTTCAGAAATTAAACAAAGTCA
AAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAGTAAGT
TTTTTTTAACATTCTGTTGTTTTTTTATTTTGTGTAAAATTCCAATTGTA
CATAAAACAACTATCTCTAAATGTAACTTAGAAGTTAGTGTAATCAATTT
CTTTATAACATTATTATCTATATTTTTAAAGTACAATGACTTGAAAATCC
ATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAACTGGTT
TTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGACCATTGA
CAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAGCAATTC
CACCTTCTGCTTCTGTCCTACATTATGGCATTGAGGTTTGAACTTCTTCT
TTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAAAAACTGAATTCCAAAA
AGTCATGTAGGTTAAATTATAGAATGCCTGTGGGTTGAAGGTTTATAAAA
AACAGTAAGAACAAAAACGTAAGACGGAAATTTTTCCCGAAAATTTTCCC
CTACATCCAATAAGATGATCTCAATTCGTTTTCTAAAAGATTTGTATTCA
AATAATTGGTAGTTACAATATTATATTACATTTCATTTTTAGGTATTTGA
GGGTATGAAAGCATATAAATGTACCGATGGATCAATACAACTTTTTCGAC
CAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGGCTAAGTTTA
CCTGTAAGTTTTGCACCAGATAGCAAACTTAAATAACGAGTCTTAAAAAG
TACAAAAAAAATTAAGGTTTTATTTTTCCCCTATCTGGGAAAGGTTCAAC
ATCTGCTTCTAAGGCCTTACTGGATTGATCCTAACCAATTTTTTGAAGGT
GGCTTTTTTTTTTAGACATTTGACAAAGAAGAAGTTTTGAAGTGCATTGC
AGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTT
CATTATATATTCGACCAACGATTATAAGTACAGAGGTATTGTTCCTATCT
GTGACTGCTTAAAATTTTTGTCATCATTGATTGTTAGTAAGTTGAAATGA
AGTCTCAAAATGCCGTAAGAGTCAAAATCTTACAGTGAATAACTGCCTTG
TAGAAAATGTTTGCTCCTACAAAACACTTGGGCACTGTATCTGTCGACTT
TTTCCCTTCTACTGTTTAAGCCTTCTCCATTGGTGGTAAGCCACCAGATA
GTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTATTACGACACA
GGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTTCGTCAGAGC
ATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGGTATATATTTCTAC
ATGTGTCCATGATTTGATCAATCTATTGGGAGAATCCTTTTATTTGTGTG
TATTTTGTTGTTAAAATTGTAAGGGAAAATACTGTAGGGAAAAAGTGAAA
TTTCTTTGTGGTACCTGTGTTGAAAATTATTTATTCTTGTCGTCATCCAT
AATTAAGATTTTATTCTCTTTAGAAACTACGGCCCAACGATATACGCGCA
AAAATTGGCTCAAGCAAGGGGCTGCTCTCAATGCTTATGGCTATACAAAG
ACCAAGTCACTGAAGTTGGAACCATGAATTTCTTCATGTTCTGGGTCAAC
GAACAAGGAGGTAAGTCTTAAAAAATGGTTCGAGATTGAAGAGTTTCATA
GATTTTTACCACAACTTAGTTTCGATTGTCTAACACTCACGTTTGATAAT
ATATACTATCAAAATGGCATTTCTTTCTTCCAAATTGCATAACTTGTGAC
CTATATTAATCACTGTTATGATTAAATCTCTATGCTGTGGTTAAGACTTC
TATCTTAGTCAGTGAATCTTTTGTAATCGTTTTTAACAGTTTTAAAAGAT
ATCCCTGTTATTTTTTACCTTCTATAGGTAGAATTGGTATTATGTAACGT
AGCACCCCTGCAGTTCACTTCTCCTACTTCATCTAGGCTTCTTATTTCCT
CAGTTAGCTGTGCATCAAAATGTGCAAAGGATTTAAGAAAAATTCCTTCC
TCCCTCAGTTGCTACTTCCTTGTTCAATACAATGCTGAATTTCCTTGTTT
GCCTTCGAGATGATTTCGATAATCTGTTATTTTACTTTCAGAACAAGAGC
TGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAA
TCACTCCTCGACCTAGCACGAGAATGGGTAAATAACTGAAATTCCTTTCA
AACTCCAAGACCTAATTACGATTACTCAGGGTGATCGTTCGATAGAAATG
TAATGTCATTAGACATCGAATAGCTTCCTTGCGGTATCACTTACATATTT
TTCCTTCTATGAATTTTCTCTTGTCGTGGTTAAAGTGAAGTTGCATAATG
ATTGTTTGACTTGCCCACATGGCACATTATCATGATCGATTTATCTCATG
AATTTTGAAACATGACCTCGTGAATTACAAATCCACTTTTAAACATCCTC
TTATTATCTTTCTGTGTTATCTTTTTTTATAAGATCAAGGTTTCTTCTAA
TTTCTTGTAACTCACGGTTTTTTAGATGATAAAGCCAAGCTGACTGATAA
TCCCCTAAATACACAAATATCCAAAGTTTCCGCCCCTTTTTGACCTTGTA
GAGCAGTCTATTTATCCTGAAACTCATAAGATAAGATTTATGTTTTGTGT
TTTGCATAAAATGCCTAATATTCTGCTTTGAAAACGATTTGCTGTCACTA
GAAATGGGAAACTCTCAATGAATATACTATGTAATAAGTGCCTTTTTATG
GAAAAACAAAACAAGCATCATAACTGTGAAACAAAAATAAACATTTTAAG
AACTTCTCAACAACTATCAGAAAAACTTATTTTGATATAATGTAACATAC
AATTTAAAACACACACACCTCCTTTTGACGTCAATGCAACCTGACACTGC
AATAATTTGTTTTTTGTTGATTATTGCTTTTCTCGTAATGCAGCGTCACA
TTGTCGCATCGGAAAGATAGAAATTGAACTGTTTGACATAAAACGATTTT
CATCACGCCCCCGTTTTAAAAAAATCCTGAAAAGTCTTTTTTAAAGCGAT
TGACATGCAGCTTTATGGAATTTTTAACTGGTGATGTTTTGTCAGTTTGC
ATATGATGAGTCATAACAATAGTTTACTGAGAGTTTAACCTGTAGCTTGA
AGCCTGAAGACCTTTAGAATAGCAGAATGACAGATTGTTTATAATCTTCT
TCGGTCCCATATTGATGTTTACGTTTTTACTCTACTTAGGATGAATTCAA
AGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCCAAGGCTGCGTCAG
AAGGACGAGTATGTATATCTATTTTGTTGACAATTGCTTTGGTCAAGTAC
TCAAAAATAAGCGACCCTTAGGGCCAATTCCTCTACTTTCCGACTAACAA
TATAGGTACTTTCTATGTGAGACAATGTGGATTATGAGGATCAGGGTCAT
TTGAAACGACTTTTTCTAAGAGTTAAATTTTATTTATCGTCGAATTCTGT
GTTTCTTTTTGAGCCTATGCAGGCCTATGTTGTCTATTCGACGTTCTATG
TCCCTTTTGCTATAAACCATTTTAGGTTGGTAGGAAGATTTCGTGGACAT
CTTTATTTTTGATAGCGCTCGTATATGTAATATCCCATAAGTTTTTTCTA
TTTGAGAAACAAGAGAAATTAGAATTATTTTTTTATCGTAAGAGATAAGA
AAAACCTCAAGTCAAAAAGGTTTAAAGTGGAAGATTGAAAAGGTAGAATT
TTACAAAACATCTCTTCTATTTTTAGGTGAAAGAAATTTTCGGTGCTGGC
ACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGACGT
CATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTGATG
AGTTGACGAGCATACAGGTAAGATTGTTTTAGGTTTGTGTTTTTAAGCCA
CAAAGGGCGAAGCTCTCGCCCTTAAAGCATTGTTTGCTCCACTTAGAACG
CAAAATAAAGCTTTCATTAAAGGTCTTAAATACTCAAAATTACTAATTTT
TTGGTGTCCAGGGTTGTCATAGTTTAAAGACGAAAAGAGTTATGAAGCTT
AAAACTTGCAGATACGTCAAAGCTTAATTTAGTTATTGTTAAGTCCTGTT
GAATACGAAGTTAGATATAGCATAAATAGCTGAGGCTTATCTTATATCAG
ACTTGCATAAAAATAACGTTTTTTTGCACACTCATTATAATGCTATCACG
TGAAAGATCTTCCCAGTAGTTTAACTAAGATTATAGTTAGAGACGCTGGA
TGAAACTGCTGCAAAAAAGAGGCAAGAATATTTTGTGTTATTATTTAGTT
AGTTTAGTGTGGTATCGTCAAGTTATATATTGGACGATGAAAAAAAGGAT
CTGAGGCCGTCTATGTATATGGTGTTGTTTTTGTATATTTCTTAAAAATC
TAGTTGCTTGTATATAGTTGCTATCAGCTTTATTGTGGGCTGAGAAGGCT
GTCCTTCATTCGATAAGAAGATATCTTGCTTTGAAATCAACCGAATCAAC
TGAACTTCCATTATGATTAAAAAAAGTTTTATAGCTTTAGCTATTCCTCA
GGTATTCAGACTCGGACACAGACAGCAGCCATTTTTCCCTTCAGAGCATG
TATTCATTTTTGAAACCAATCCTATAAAAAATCATCAAAAACATGAAATC
ATAAATAAGTATTAAAAACATGATAGTACCGATAGCTTCAAAGATTTTAT
AAAGAAGGTTGCAGATATTTTTTTCTTGGTCAAGGCTCTCCAATAAAATC
ATGGTGACTTTGATTTTTCATTTTTCACTTTGCAGTACGGACGAACACCT
CACCCATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACC
TAACCTCCAGTAACAACAACAACCACTTCTAAATATCTTTCCAACCAAAA
ACAAAAAAACCTTTTTTACCTTTTATCAACACTTT Coding sequence (CDS) from alignment at sc0000159_pilon:93584..100118- >MSTRG.16622.2.p1 ID=MSTRG.16622.2.p1|Name=MSTRG.16622.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3546bp|location=Sequence derived from alignment at sc0000159_pilon:93584..100118- (Clytia hemisphaerica_ch_hm2_pilon)
GTCCAGTTGGGTCTTATTACGACACAGGAAGTTTCCAACCCATCTCACTT
TTAGACATTTGACAAAGAAGAAGTTTTGAAGTGCATTGCAGAACTGGTGC
GTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTTCATTATATATT
CGACCAACGATTATAAGTACAGAGGTATTTGAGGGTATGAAAGCATATAA
ATGTACCGATGGATCAATACAACTTTTTCGACCAGAAGAAAATATGAAAC
GACTATTTGCTTCAGCTGAAAGGCTAAGTTTACCTTACAATGACTTGAAA
ATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAACT
GGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGACCA
TTGACAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAGCA
ATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGAGAAATTAAACAA
AGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAA
TGGTAGTCACAATCTCCATCAGAAATTTTCTTCGAGCACAGGTCCAGTTG
GGTCTTATTACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGACATT
TGACAAAGAAGAAGTTTTGAAGTGCATTGCAGAACTGGTGCGTGTTGATC
AAGACTGGATCCCAGATTGTGACAGCAGTTCATTATATATTCGACCAACG
ATTATAAGTACAGAGGTATTTGAGGGTATGAAAGCATATAAATGTACCGA
TGGATCAATACAACTTTTTCGACCAGAAGAAAATATGAAACGACTATTTG
CTTCAGCTGAAAGGCTAAGTTTACCTTACAATGACTTGAAAATCCATCAA
ACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAACTGGTTTTTGG
TAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGACCATTGACAATG
GATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAGCAATTCCACCT
TCTGCTTCTGTCCTACATTATGGCATTGAGAAATTAAACAAAGTCAAAGG
CGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAATGGTAGTCA
CAATCTCCATCAGAAATTTTCTTCGAGCACAGGTCCAGTTGGGTCTTATT
ACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGACATTTGACAAAGA
AGAAGTTTTGAAGTGCATTGCAGAACTGGTGCGTGTTGATCAAGACTGGA
TCCCAGATTGTGACAGCAGTTCATTATATATTCGACCAACGATTATAAGT
ACAGAGGTATTTGAGGGTATGAAAGCATATAAATGTACCGATGGATCAAT
ACAACTTTTTCGACCAGAAGAAAATATGAAACGACTATTTGCTTCAGCTG
AAAGGCTAAGTTTACCTTACAATGACTTGAAAATCCATCAAACAACAACT
CCAAGGGAAAAGCCATCTGCAGATTCCAAACTGGTTTTTGGTAAACAAAT
GGCTGATCACATGCTTGTTGCAGAATGGACCATTGACAATGGATGGGATA
TTCCAAGTATTGTTCCATATGGCCCGTTAGCAATTCCACCTTCTGCTTCT
GTCCTACATTATGGCATTGAGAAATTAAACAAAGTCAAAGGCGCTTTATC
CATTGCGTCGAGATCCTTCTCAGAAATCAGAATGGTAGTCACAATCTCCA
TCAGAAATTTTCTTCGAGCACAGGTCCAGTTGGGTCTTATTACGACACAG
GAAGTTTCCAACCCATCTCACTTTTAGACATTTGACAAAGAAGAAGTTTT
GAAGTGCATTGCAGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATT
GTGACAGCAGTTCATTATATATTCGACCAACGATTATAAGTACAGAGGTA
TTTGAGGGTATGAAAGCATATAAATGTACCGATGGATCAATACAACTTTT
TCGACCAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGGCTAA
GTTTACCTTACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAA
AAGCCATCTGCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCA
CATGCTTGTTGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTA
TTGTTCCATATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACAT
TATGGCATTGAGAAATTAAACAAAGTCAAAGGCGCTTTATCCATTGCGTC
GAGATCCTTCTCAGAAATCAGAATGGTAGTCACAATCTCCATCAGAAATT
TTCTTCGAGCACAGGTCCAGTTGGGTCTTATTACGACACAGGAAGTTTCC
AACCCATCTCACTTTTAGACATTTGACAAAGAAGAAGTTTTGAAGTGCAT
TGCAGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCA
GTTCATTATATATTCGACCAACGATTATAAGTACAGAGGTATTTGAGGGT
ATGAAAGCATATAAATGTACCGATGGATCAATACAACTTTTTCGACCAGA
AGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGGCTAAGTTTACCTT
ACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCT
GCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGT
TGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCAT
ATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATT
GAGAAATTAAACAAAGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTT
CTCAGAAATCAGAATGGTAGTCACAATCTCCATCAGAAATTTTCTTCGAG
CACAGGTCCAGTTGGGTCTTATTACGACACAGGAAGTTTCCAACCCATCT
CACTTTTAGACATTTGACAAAGAAGAAGTTTTGAAGTGCATTGCAGAACT
GGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTTCATTAT
ATATTCGACCAACGATTATAAGTACAGAGGTATTTGAGGGTATGAAAGCA
TATAAATGTACCGATGGATCAATACAACTTTTTCGACCAGAAGAAAATAT
GAAACGACTATTTGCTTCAGCTGAAAGGCTAAGTTTACCTTACAATGACT
TGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCC
AAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATG
GACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGT
TAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGAGAAATTA
AACAAAGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAAT
CAGAATGGTAGTCACAATCTCCATCAGAAATTTTCTTCGAGCACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:93584..100118 - |
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