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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:430368..435598+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16493.1.p1 ID=MSTRG.16493.1.p1|Name=MSTRG.16493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5231bp|location=Sequence derived from alignment at sc0000156_pilon:430368..435598+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGGGGCAAAATTAGGCTTACGCATATCAGGAATAATCTTTTCGTCGT
GTCATTTCTTGATTTCATATTGAGCATATCaagagaaagaaattttaatg
TTGATAATTTTCAGGATGAATTTTCTACATCACTTTCTCATTCATTTTTA
CTTTATTCATCGTCAACATATCTTCGCAGCATCAGCAGACGATGGGTTTT
TTCCTGATCCAGTTATCAGAGAAGTGATACAACACCATAAATCGAACGCA
TTTAGCATAGTAACCATCAAAtatatcaaattcataaaagGGACACGCGG
CTATATATCAGCGGCTAAGCTAGGAAGAGGATGCAGTAAGAACGGGTTGA
ACAGAGTAGATTGCCCTGGTAGGTGCATGGATTACAACAGCTGTATATCT
TGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGAAACTGTTCCTCGAGC
TTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGCGAATTTATGAGCTAA
AGGTTTGTAACGATCATTCTTCATCAACTTCGTTCCCAGTGCCCTCACCG
TTTGATCAAAACGGGTACATTATCGCCCTTATCGGACAGAGAAATGtcgg
acaaattttttgaagatgacgaaaattttaTCCGACGAATAATTTAGACC
GACGAAAGAAAAGTATTTTAGGCTAAAACTTGTGTTTCTTTGGACAAAAG
TGGGTGACCAACCGATAAGGTACCCTTGCCATTAAATTTTGAAGTTATTA
TTGAATAAGTAAAAAATAGTAATTTTTATGATTACGTCGTAAACAACTCC
AGTCTAGGAGTTTTTAAAGGTGGTTTGAGAGctctttcttttacttttag
aATCCTTGCACTGAGAATTTAAATTTATGCGAGCATGGAAGCATTTGTTC
ACCTCATCGTTTGACCAAAACATACGATTGCATCAACTGTCTTCCACCTT
ATTCGGGAAAGCATTGCAATGAGTCAGGTATATAAGTCatcttttaattt
tgatgattctCCCACGGACTGGGGACGAGTATATTTTCAACAAACTTAtg
aaatgtttacatttttatgtGGAAAATCCGTCCATCActtttaaaaacag
tttttgaatagttttcacaggatacacgttttttatataagaacaaacta
tataagaacataaggcttcgatggccaaaatgttaagaacaagttaagaa
cattctaaggcttcgtggactctaaaacagccaatttcttaggaaaatag
gaaaaatggtcacaaaatagtgaaattaagaatattttaagaacattttt
aggcttaaaacccaaaaagttaagaacatccgaaggcttcaaaaattttg
gatgttcttataaaaaaaacgtgtacacgaCTAACTAAATTGGTTATCTA
CGAGCTGAACTCAATTAATCATATGGAAGAGGTGGGGCTTGGAATAATAT
ACTTTCGAACACATCTAGAGAGGTTTAAAGGCCTTTAAAGATAGAGTTTG
TCAACCCAGAGTGAAAGACACATTTTAAGTTTATCGTGGCATGCATCACG
agatttcatgaaaaatatcatCATATATTCCTTCTCTCGTTATAGATACA
CTTCCACCATCTATCAATCTACCACTTCACGAAGGTTAGAATAAAAACTA
TATAACTCTTACTTTTATGGGAGGGGGTAAATTCacagtgtttaaaaaaa
tagaGAAGAAAATTTgagagagagagaATAAGCCTTCTCCTATAATGGGG
GATAGGCCTCACACCTAAAGTGTGAGGATCACAGCGcatatgcaaaaaaa
aatacttctaTCAAAAGCTATCaaaaaaaaTGTAGAGGAAATACTAGTGA
TATGTTAGATTTTCATAGAATGAACAAGGCTTCTTCATGAAAGTCTGTTC
AAGGCCAGTAAATGCCACCTGTCTTTGTCTTGCCTTGTTAAGGCAGTTCA
TTAAGGAACATCCATATGTAAAATTCGGTGCACCTCTTGGTCTTTTTGAC
CTAACCCAGCACGATAACATTTTACGTGGTAGTCGTGACCATGGCATACG
AATAACGTGACCAGCCCAACGGAGTTGTTGTTGACAAATATATGAATCGA
TTGATTCAAGTGAAAGTCTATCAACTAGGTCAACAGTTCGTAAGTGATCT
CTTAGTGATATATGACAGATAGTTCTTATACATCGGCGATGGAAGCTTCT
TAAACGATTCAGAAGTTTCACAGCGAGGCTCCAGCTTTCGACCCCATAGA
TAGAAAGCTCTCTTCCTAATCAGCATTCGGTTTATATACCTTAAGAATGA
AGTGGTCTTGAACTATAGCCAAGAGACCATGGCCCGGTAAAACTGCCTTT
TCAGAAGGCGAAATGGCGTTACGTAATGAACATatataatttcttttaaa
ttgaaCTAGTGGGATGGTGTGATGGTTGAGACAATAAGTTGAGATAATGT
GGTCTAGTTTTAATAGATCTTTTCTGTGTTAAGATGTTATAATGTCCAGT
TCATGTCCAATTATTTCTTTTAGATATTCTATTCGGGCGGAACATATCAT
GCCGCATGATGAGAAATTACTTCACAATGCCAAACCATTTAATCGACGTT
TGGATTCATCCATGGCGGGATcacaggaaaatcaaagtcacgTGTGAAGG
TGAGAGACAAAGTTTGTTGATTCCCCAATTTTCCCAGACTTTTGTCTTAA
ACAGAACTCCTTTTAAGGGTGAGCAAGGGGCTAATATACAGTCGAAGCTC
CAATCAGCGGACACCTCAAGTGGAGGACAGCTCTGATTAGTggacacaga
ttttttttccCGTTCCAGTGTTAGTGACCTTCACAATGTTCCAAAAGGCG
GATAGCTCTAAGTCTAACCTCCCATGGTGTCCGCTAGTAATTAGATCTTC
GAGCATATTTCCATGAAATCATCACTTATACGgaaacaaccaaaacaaac
cgGGTGTTCTGTAAACTAATGTGGTGAAGTAATGAAACTAGTGGCAAACA
TTTGGCTTTTTGAGGTATTTACAtagaaaagattacgtaatgGATATATG
TGTCATAAAAGAGCTACATCAAATTATACATTGATAGGAGTTTGTTTACA
AGTTCTTATCTGACCCTTTATCAAAAATGGAGCCGCTCTTCCAGAAACGA
GTGTGATGTTTCGATTTGGTATTAAAGCTTTCTAGCCAACACATTTACTC
TCAAAAGCATCGGGGGCAGTTAttatcttttgtttttgctGACTTTCTGC
TATTTAAAAAAGTCTATACAACCTTCAACACAgatgatatttttctttca
tttgaaaataaattctttttagGAAGGTACATGACAGTTTCTTTTATCCA
CACTAATCAAAATGTGAACGAGTTGAATTCAACCAACCTAACAGACGGCT
TGGACCTTACCCACGGCGGCGGCGAGAATCGAGCCCATACTTCTTTCCTA
CAAGCGTTGGAAAATGTGATCCAATTTGACCAGATACATTTCCAATGTCG
GCAGCAAAGCACAGGTTTGAAGGCTACATTGAAGTCAATGCTTACAACCA
CAAATGCCCATTTTAATGTACTCGATTATTTCATTGGTAAAAGTAATACG
TCTCCTAAGGTTAAGATGATGGATAAATCAACCGACATATTCGATGGATC
GTGGGATTTGGTTGGAGGTAGCGCTTCTGATGTTTCTGGTGCTCTTGATA
TCGAGGAAAGAACATTTAAGAATGTTGCACTTAGAATAAATGGATACAAC
ATCACTTTTGGACCTAATTCGCAACAGTGTTTTGGACAAGAAGGCGATTT
TTCGGAGTTCCGGGTGACAGTGAGCTAAATAAAACCATATCCTGCGTCTG
CAATTTtgaattctgtaaaaatatattGTCACAgcacaaaataataaaag
agttagttttgaaatattcgaaggTTCAATGTTTTGAACGCTATAGTCTG
TTTCCAAAGCACCATGGTAGAATCGaagtcaaaatttacaaatacaAATG
CCCATTTTAATGTACTCGATCATTTCATTGGTAAAAGTAATACGTCTCCT
AAGATTAATAGGATGGTAAATCGCCCGACATATTCGATGGATCGTGGGAT
TTGGTAAGAGATAGAGCTTCTGATTTCTCTGGTTTTCTTGATGTTGAGGA
GAGAACATTTAAAAATATCGGACTTGCAATAAATGGATACAATATTACTT
TTGGATCTAATGTTCAATAATGTTTTGGACAAGAAAGGTGATTTTACAGA
GTTTCGGGTGACAGTAGCAATGTTACGCAAGGAGCTATTTAGGACTTTAG
ATACGTTTGAGTCAACCTGTATATAATTCGTCTTagcaaaaattgtaaac
aaaaaatctatGTGCAGGCTGACTCATAAATGCGTCTCAGGTTATAAAAA
GCTCCTTGAGTAACCTTGATGGTGAGCTAAAGAAAACTATATCCTGCACc
tggaatttcaaattttcaaaactttatatCTATTGACTTGACATGAATCA
CGCATTTTGATTGGACCAAATTCTGAAATCCCGCGATCTGATTGGACGAA
AATTTAAAGAGAGTACCACGCCGGTTTTTATATCCTCTGATGCACTGATT
CATTCTCCATCAAATTTTCACTATATAATATTTCAACTTTAGAAGATCAA
CTTTTGAAAGATTGATGTTTAATTACGTCAAAGCTTGGATCACATACGCT
AAGGTATAAAACAACTTTTAAGCCCTGAGTGGATATCTGAAAATgcgaga
aaataaaaatgagtgCTGCTATTCATTTACTTTTTGACATGTATGTTTTA
TGACATgagtgaacaaaaaagtaaaatcaacacagtttgttttttactag
ttttacagtttgttttATGACATGGATGATGGTATTCTAAGAACGTATTG
TTGTGTTGTGGAACCCCTTTACTTCAAGTGAGACGATTTTGTCTCACGCA
CACGATGGAAATATATGGTTCAAAATGAGTTATTTTTCAACTGTATGTAC
CTGCAGGGGTCGTCTACGTATTTCaaaccctaaaaccactaaacattaaa
agataaaaattgtttaaatttttgcaaaaaagcaGTACAAATGAGGCTGC
TAATATTAggcatttaattttttttgaccggcctgaaagaagctgaaaaa
tgttcttaaaaactttAGGTCTCAAAAAGCttatatttattatcgattta
ttatattctttttatgttttgttatatGAAG Coding sequence (CDS) from alignment at sc0000156_pilon:430368..435598+ >MSTRG.16493.1.p1 ID=MSTRG.16493.1.p1|Name=MSTRG.16493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6015bp|location=Sequence derived from alignment at sc0000156_pilon:430368..435598+ (Clytia hemisphaerica_ch_hm2_pilon)
atgTTGATAATTTTCAGGATGAATTTTCTACATCACTTTCTCATTCATTT
TTACTTTATTCATCGTCAACATATCTTCGCAGCATCAGCAGACGATGGGT
TTTTTCCTGATCCAGTTATCAGAGAAGTGATACAACACCATAAATCGAAC
GCATTTAGCATAGTAACCATCAAAtatatcaaattcataaaagGGACACG
CGGCTATATATCAGCGGCTAAGCTAGGAAGAGGATGCAGTAAGAACGGGT
TGAACAGAGTAGATTGCCCTGGTAGGTGCATGGATTACAACAGCTGTATA
TCTTGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGAAACTGTTCCTCG
AGCTTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGCGAATTTATGAGC
TAAAGaATCCTTGCACTGAGAATTTAAATTTATGCGAGCATGGAAGCATT
TGTTCACCTCATCGTTTGACCAAAACATACGATTGCATCAACTGTCTTCC
ACCTTATTCGGGAAAGCATTGCAATGAGTCAGATACACTTCCACCATCTA
TCAATCTACCACTTCACGAAGATATTCTATTCGGGCGGAACATATCATGC
CGCATGATGAGAAATTACTTCACAATGCCAAACCATTTAATCGACGTTTG
GATTCATCCATGGCGGGATcacaggaaaatcaaagtcacgTGTGAAGGAA
GGTACATGACAGTTTCTTTTATCCACACTAATCAAAATGTGAACGAGTTG
AATTCAACCAACCTAACAGACGGCTTGGACCTTACCCACGGCGGCGGCGA
GAATCGAGCCCATACTTCTTTCCTACAAGCGTTGGAAAATGTGATCCAAT
TTGACCAGATACATTTCCAATGTCGGCAGCAAAGCACAGGTTTGAAGGCT
ACATTGAAGTCAATGCTTACAACCACAAATGCCCATTTTAATGTACTCGA
TTATTTCATTGGTAAAAGTAATACGTCTCCTAAGGTTAAGATGATGGATA
AATCAACCGACATATTCGATGGATCGTGGGATTTGGTTGGAGGTAGCGCT
TCTGATGTTTCTGGTGCTCTTGATATCGAGGAAAGAACATTTAAGAATGT
TGCACTTAGAATAAATGGATACAACATCACTTTTGGACCTAATTCGCAAC
AGTGTTTTGGACAAGAAGGCGATTTTTCGGAGTTCCGGGTGACAGTGAGC
TAAatgTTGATAATTTTCAGGATGAATTTTCTACATCACTTTCTCATTCA
TTTTTACTTTATTCATCGTCAACATATCTTCGCAGCATCAGCAGACGATG
GGTTTTTTCCTGATCCAGTTATCAGAGAAGTGATACAACACCATAAATCG
AACGCATTTAGCATAGTAACCATCAAAtatatcaaattcataaaagGGAC
ACGCGGCTATATATCAGCGGCTAAGCTAGGAAGAGGATGCAGTAAGAACG
GGTTGAACAGAGTAGATTGCCCTGGTAGGTGCATGGATTACAACAGCTGT
ATATCTTGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGAAACTGTTCC
TCGAGCTTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGCGAATTTATG
AGCTAAAGaATCCTTGCACTGAGAATTTAAATTTATGCGAGCATGGAAGC
ATTTGTTCACCTCATCGTTTGACCAAAACATACGATTGCATCAACTGTCT
TCCACCTTATTCGGGAAAGCATTGCAATGAGTCAGATACACTTCCACCAT
CTATCAATCTACCACTTCACGAAGATATTCTATTCGGGCGGAACATATCA
TGCCGCATGATGAGAAATTACTTCACAATGCCAAACCATTTAATCGACGT
TTGGATTCATCCATGGCGGGATcacaggaaaatcaaagtcacgTGTGAAG
GAAGGTACATGACAGTTTCTTTTATCCACACTAATCAAAATGTGAACGAG
TTGAATTCAACCAACCTAACAGACGGCTTGGACCTTACCCACGGCGGCGG
CGAGAATCGAGCCCATACTTCTTTCCTACAAGCGTTGGAAAATGTGATCC
AATTTGACCAGATACATTTCCAATGTCGGCAGCAAAGCACAGGTTTGAAG
GCTACATTGAAGTCAATGCTTACAACCACAAATGCCCATTTTAATGTACT
CGATTATTTCATTGGTAAAAGTAATACGTCTCCTAAGGTTAAGATGATGG
ATAAATCAACCGACATATTCGATGGATCGTGGGATTTGGTTGGAGGTAGC
GCTTCTGATGTTTCTGGTGCTCTTGATATCGAGGAAAGAACATTTAAGAA
TGTTGCACTTAGAATAAATGGATACAACATCACTTTTGGACCTAATTCGC
AACAGTGTTTTGGACAAGAAGGCGATTTTTCGGAGTTCCGGGTGACAGTG
AGCTAAatgTTGATAATTTTCAGGATGAATTTTCTACATCACTTTCTCAT
TCATTTTTACTTTATTCATCGTCAACATATCTTCGCAGCATCAGCAGACG
ATGGGTTTTTTCCTGATCCAGTTATCAGAGAAGTGATACAACACCATAAA
TCGAACGCATTTAGCATAGTAACCATCAAAtatatcaaattcataaaagG
GACACGCGGCTATATATCAGCGGCTAAGCTAGGAAGAGGATGCAGTAAGA
ACGGGTTGAACAGAGTAGATTGCCCTGGTAGGTGCATGGATTACAACAGC
TGTATATCTTGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGAAACTGT
TCCTCGAGCTTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGCGAATTT
ATGAGCTAAAGaATCCTTGCACTGAGAATTTAAATTTATGCGAGCATGGA
AGCATTTGTTCACCTCATCGTTTGACCAAAACATACGATTGCATCAACTG
TCTTCCACCTTATTCGGGAAAGCATTGCAATGAGTCAGATACACTTCCAC
CATCTATCAATCTACCACTTCACGAAGATATTCTATTCGGGCGGAACATA
TCATGCCGCATGATGAGAAATTACTTCACAATGCCAAACCATTTAATCGA
CGTTTGGATTCATCCATGGCGGGATcacaggaaaatcaaagtcacgTGTG
AAGGAAGGTACATGACAGTTTCTTTTATCCACACTAATCAAAATGTGAAC
GAGTTGAATTCAACCAACCTAACAGACGGCTTGGACCTTACCCACGGCGG
CGGCGAGAATCGAGCCCATACTTCTTTCCTACAAGCGTTGGAAAATGTGA
TCCAATTTGACCAGATACATTTCCAATGTCGGCAGCAAAGCACAGGTTTG
AAGGCTACATTGAAGTCAATGCTTACAACCACAAATGCCCATTTTAATGT
ACTCGATTATTTCATTGGTAAAAGTAATACGTCTCCTAAGGTTAAGATGA
TGGATAAATCAACCGACATATTCGATGGATCGTGGGATTTGGTTGGAGGT
AGCGCTTCTGATGTTTCTGGTGCTCTTGATATCGAGGAAAGAACATTTAA
GAATGTTGCACTTAGAATAAATGGATACAACATCACTTTTGGACCTAATT
CGCAACAGTGTTTTGGACAAGAAGGCGATTTTTCGGAGTTCCGGGTGACA
GTGAGCTAAatgTTGATAATTTTCAGGATGAATTTTCTACATCACTTTCT
CATTCATTTTTACTTTATTCATCGTCAACATATCTTCGCAGCATCAGCAG
ACGATGGGTTTTTTCCTGATCCAGTTATCAGAGAAGTGATACAACACCAT
AAATCGAACGCATTTAGCATAGTAACCATCAAAtatatcaaattcataaa
agGGACACGCGGCTATATATCAGCGGCTAAGCTAGGAAGAGGATGCAGTA
AGAACGGGTTGAACAGAGTAGATTGCCCTGGTAGGTGCATGGATTACAAC
AGCTGTATATCTTGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGAAAC
TGTTCCTCGAGCTTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGCGAA
TTTATGAGCTAAAGaATCCTTGCACTGAGAATTTAAATTTATGCGAGCAT
GGAAGCATTTGTTCACCTCATCGTTTGACCAAAACATACGATTGCATCAA
CTGTCTTCCACCTTATTCGGGAAAGCATTGCAATGAGTCAGATACACTTC
CACCATCTATCAATCTACCACTTCACGAAGATATTCTATTCGGGCGGAAC
ATATCATGCCGCATGATGAGAAATTACTTCACAATGCCAAACCATTTAAT
CGACGTTTGGATTCATCCATGGCGGGATcacaggaaaatcaaagtcacgT
GTGAAGGAAGGTACATGACAGTTTCTTTTATCCACACTAATCAAAATGTG
AACGAGTTGAATTCAACCAACCTAACAGACGGCTTGGACCTTACCCACGG
CGGCGGCGAGAATCGAGCCCATACTTCTTTCCTACAAGCGTTGGAAAATG
TGATCCAATTTGACCAGATACATTTCCAATGTCGGCAGCAAAGCACAGGT
TTGAAGGCTACATTGAAGTCAATGCTTACAACCACAAATGCCCATTTTAA
TGTACTCGATTATTTCATTGGTAAAAGTAATACGTCTCCTAAGGTTAAGA
TGATGGATAAATCAACCGACATATTCGATGGATCGTGGGATTTGGTTGGA
GGTAGCGCTTCTGATGTTTCTGGTGCTCTTGATATCGAGGAAAGAACATT
TAAGAATGTTGCACTTAGAATAAATGGATACAACATCACTTTTGGACCTA
ATTCGCAACAGTGTTTTGGACAAGAAGGCGATTTTTCGGAGTTCCGGGTG
ACAGTGAGCTAAatgTTGATAATTTTCAGGATGAATTTTCTACATCACTT
TCTCATTCATTTTTACTTTATTCATCGTCAACATATCTTCGCAGCATCAG
CAGACGATGGGTTTTTTCCTGATCCAGTTATCAGAGAAGTGATACAACAC
CATAAATCGAACGCATTTAGCATAGTAACCATCAAAtatatcaaattcat
aaaagGGACACGCGGCTATATATCAGCGGCTAAGCTAGGAAGAGGATGCA
GTAAGAACGGGTTGAACAGAGTAGATTGCCCTGGTAGGTGCATGGATTAC
AACAGCTGTATATCTTGGTCGTTTACTGGGACTTCGTGCATTTGTTTTGA
AACTGTTCCTCGAGCTTCACCTCGTAAAAGCGTTTTCTCTTCAGGCTGGC
GAATTTATGAGCTAAAGaATCCTTGCACTGAGAATTTAAATTTATGCGAG
CATGGAAGCATTTGTTCACCTCATCGTTTGACCAAAACATACGATTGCAT
CAACTGTCTTCCACCTTATTCGGGAAAGCATTGCAATGAGTCAGATACAC
TTCCACCATCTATCAATCTACCACTTCACGAAGATATTCTATTCGGGCGG
AACATATCATGCCGCATGATGAGAAATTACTTCACAATGCCAAACCATTT
AATCGACGTTTGGATTCATCCATGGCGGGATcacaggaaaatcaaagtca
cgTGTGAAGGAAGGTACATGACAGTTTCTTTTATCCACACTAATCAAAAT
GTGAACGAGTTGAATTCAACCAACCTAACAGACGGCTTGGACCTTACCCA
CGGCGGCGGCGAGAATCGAGCCCATACTTCTTTCCTACAAGCGTTGGAAA
ATGTGATCCAATTTGACCAGATACATTTCCAATGTCGGCAGCAAAGCACA
GGTTTGAAGGCTACATTGAAGTCAATGCTTACAACCACAAATGCCCATTT
TAATGTACTCGATTATTTCATTGGTAAAAGTAATACGTCTCCTAAGGTTA
AGATGATGGATAAATCAACCGACATATTCGATGGATCGTGGGATTTGGTT
GGAGGTAGCGCTTCTGATGTTTCTGGTGCTCTTGATATCGAGGAAAGAAC
ATTTAAGAATGTTGCACTTAGAATAAATGGATACAACATCACTTTTGGAC
CTAATTCGCAACAGTGTTTTGGACAAGAAGGCGATTTTTCGGAGTTCCGG
GTGACAGTGAGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:430368..435598 + |
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