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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:352582..355853+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16489.1.p1 ID=MSTRG.16489.1.p1|Name=MSTRG.16489.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3272bp|location=Sequence derived from alignment at sc0000156_pilon:352582..355853+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTTGATTCTTGAGACTTTTTGCTCCAAGATCTGTGTTTTTACTCGTTT
TTCCTTTCTGCCTGAGTGGTGAAAGGGCTTTGTTTCTGTATCTCCGGTCC
ATAGGATTAGGCCTGTTCAAAGTATTCCTTATTCTTCccggttgtttttt
tttctcctgtggggaacataaagttttgaattgcgattctgaattttttc
ttgacgatttttttttttcgaaattccgtCTGAATTCGTAGttttattgg
acattttactgacaattttttttgacagatatttttttgttttgattttt
tgcactcaAGAAATTCTGTTCAAAGTAGATTTTTTGGCTAGAGAAGTTTG
CTTATACTTTCTcgtttttgtccaattttaaaGTTTCCTGCTTTGCTATA
GTGAATCTCTCTTTCTATTTACTCTTGGCTATTGTGATTGTGTTTCGCTa
gagtttttctttcaaaaggtgAGGATTGGTGGAATTCTATTGTTTGAAGT
TTCCCCATCGTTTTTAGATCAGCTGTTGATAGCtgtatttgagatttttt
atttaatttggtaatttgatttggtgttgaaattttcctttccttgattg
GCACGCGtcggaaaatttccaaatctttTCTTTCTCTGATTTAATTGGCT
TTGGCTTTGGCTTTTGTTTGAAGTTTCCGTCTTTTATATCACCATGACAC
TGGATCGAAAACTCAAGCGGAGAGAAGGCCTTAGAGCTTTCTTAAAGTCC
ACTATGGAGAATATCGAAAAGTATCTTAAAGGTGATGACATTTCTGAGGC
AAAGTTAAGATCCTTTAAGTCTATGCTAGAATCCACTTGTGCCCAACTTT
CCGACATCAATGAAGAGATTCTCCCACTTTTAGACCCTGAAAAGATCAGT
GACGATGTAGTTCAAAGCATGGGATTAATGCTTCCTGCAACTGAGATCGA
TGCTTGTCTTGACATTAAGCTTTTGGAGATAGCAAAATCGAATGGCTCCG
CGTCTGTTTCTTTGCCAACTGCATCCGTTTCTTCTGGGACAAGTGTTTCT
CGACTTCCAAAGATAGAGCTCCCTACGTTTAAAGGTGATCCGCTCAAGTG
GCAAGGGTTTTGGGATCAGTTCAAGATTTCCATCCACGAAAATGAGCGCA
TAAACGACATTGACcgctttaattttttgaaaaaatatttggctGGCGAA
GCCTTGGATTCGATTAAAGGTTTGACTCTAAACTCTGATAATTACAAGGA
AGCCATAGAAATATTATGCGAGAGGTATGGGAACGAGCAAGTTTTGATTT
CGTCACACATGCAATCCCTCTTGAGGATACAGAAGATAAGATCAAAAGAC
AACATAAAGAGCCTTCGAACGCTTTACAACCACGTTGAAAGCTGTGTGCG
AAATTTGAAAGCCTTGAAGCTCGAAGCTAAAGGTTATGGCAGTCTTTTGA
TCCCTATCTTAAAAGAGAAACTCCCTGACGAGCTAAAAATTGTGATCTCT
AGGAAGTTTGGAAGTTCCATCTGGACACTAGATTTATTGCTCACTTATCT
CAATGAAGAACTTAGAGCTCAGGAAAATTGCACCAATTCTGGTGGCGGAA
AAGCTGAGCGAACTGATGAGAGTGATCCACTTTATAGTGCCCTTGGTCTT
TTTTCTAATACTGAGAAGAACGTCTGTGtcttttgtaaaaagagtcacaG
CTCTGCTAAATGTCGAAAGGTCACAAATACACAGTCACGTCGGGATATTC
TAATTAGAGAAAAGaggtgttttttttgtttggctCGTGGACATCGTTCC
AATGCTTGTAGAGATAAGTACTCATGTAATAGGTGTAACAAGAGGCATCA
CATTTCTATTTGCGATGAAGGTAAACAAAGATCTGAAGCTGATAACATTT
CTAACAATCAGATCTCGATCTTGACCGATGCAAATAGTGAGCCTCAGTCT
GAATCCAAAGCTCCTTGTAGTTGTAGTTGCAACTCTGTTCCTACTCCTGT
TTCTCAAAATTGTGCTCAAGTTTCTTCACGTAGCGTTTTGTTGCAGACTG
CAACTAGTGAGATCTTTGGTTCCAGTTGTCACAACAGTGTGAAAACAAGA
TTGTTGTTCGACACTGGAAGCCAAAGAAGCTACATTACGACAGAGTTAAA
AGACCGTTTAAAATTAAAGTGCGTGAGAAAAGAGAATGTAGTGATTAAGA
CTTTTGGAAATTTGAATAATGCGGAAATCAAACGTTTGGAAGTTGTTCAA
TTCAAAGTGAAACATCGGAAGTCTTCTAAATACGTTTTAGTTGAAGCTCT
TTGTGTTCCGGACATTTGTAGCCCGATTGCAAACCAGAAGTTGGATTGTG
CAAAGAAGTTGAATGAATTCTCTGATTTGGTGTTTGCAGATGTTTCCGAG
GAGTTTGACTTGAGTATAGGTGTATTGGTTGGTATCGAtttttattttcg
cttttttaCTGGTAAGAGACGTGAGAGCAAGGAAGGTGTTGTGGCTTGTG
AATCTTCACTTGGTTGGATTTTGAGTGGATCTGTTGTTTTCAAAGGTTTG
ACTGAAGTGACTTATAGTCATCAAATGAGAGTTGAGGTACAAACTGTTGA
TCCACTTGATGCCAAGCTCCATAAGTTTTGGCAGATAGAGGAGGCAGAGA
GTGCCGAGGATAACTCAGTGATTAACCAATTTACCAAAGACATTTACCAT
GATGGTACTAGGTATGTCGCGAAACTGCCTTTCAAGCCTGACCACGAGAG
TGTGCCTGACAACTTTTCGACCTGTGTGAAACGTCTGGAATCCCTTAATT
CGCGTCTCGATCGTCTTGGTATCAATACTGACTAcgagaaaatttttatt
gattatgAGAAAGACGGAATTATCGAACGTGTGCCTGAGGCGCAGATTGC
GAAAGAGGAGGGTACCGTTCATTACATTCCCCATAGACCAGTTATCCGTG
AAGACAAGGTCACCACTAAGATAAGGCCCGTGTTTGATGCTTCTTGTTCT
GTCAATGGTGTATCCTTGAATGATTGCCTTTATCCTGGTCCAAATTTACT
TGCTaagatttttgacattttactaCGTTTTAGAATGAACAAGATTGGTA
TTTTAGCTGATATCAAGCAAGCTTTCTTGAATATCAGCATCCATCCTGAT
CATAGAGACTTTTTGAGATTTCTCTGGAGAGACCCTTCGTCCTCTGATAG
AGAAATCGTTGTCTATCgttttttgagagttgtttttggtttgacgtcta
gtccttttttACTCAATGGTAC Coding sequence (CDS) from alignment at sc0000156_pilon:352582..355853+ >MSTRG.16489.1.p1 ID=MSTRG.16489.1.p1|Name=MSTRG.16489.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000156_pilon:352582..355853+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACACTGGATCGAAAACTCAAGCGGAGAGAAGGCCTTAGAGCTTTCTT
AAAGTCCACTATGGAGAATATCGAAAAGTATCTTAAAGGTGATGACATTT
CTGAGGCAAAGTTAAGATCCTTTAAGTCTATGCTAGAATCCACTTGTGCC
CAACTTTCCGACATCAATGAAGAGATTCTCCCACTTTTAGACCCTGAAAA
GATCAGTGACGATGTAGTTCAAAGCATGGGATTAATGCTTCCTGCAACTG
AGATCGATGCTTGTCTTGACATTAAGCTTTTGGAGATAGCAAAATCGAAT
GGCTCCGCGTCTGTTTCTTTGCCAACTGCATCCGTTTCTTCTGGGACAAG
TGTTTCTCGACTTCCAAAGATAGAGCTCCCTACGTTTAAAGGTGATCCGC
TCAAGTGGCAAGGGTTTTGGGATCAGTTCAAGATTTCCATCCACGAAAAT
GAGCGCATAAACGACATTGACcgctttaattttttgaaaaaatatttggc
tGGCGAAGCCTTGGATTCGATTAAAGGTTTGACTCTAAACTCTGATAATT
ACAAGGAAGCCATAGAAATATTATGCGAGAGGCGCAGATTGCGAAAGAGG
AGGGTACCGTTCATTACATTCCCCATAGACCAGTTATCCGTGAAGACAAG
GTCACCACTAAGATAAATGACACTGGATCGAAAACTCAAGCGGAGAGAAG
GCCTTAGAGCTTTCTTAAAGTCCACTATGGAGAATATCGAAAAGTATCTT
AAAGGTGATGACATTTCTGAGGCAAAGTTAAGATCCTTTAAGTCTATGCT
AGAATCCACTTGTGCCCAACTTTCCGACATCAATGAAGAGATTCTCCCAC
TTTTAGACCCTGAAAAGATCAGTGACGATGTAGTTCAAAGCATGGGATTA
ATGCTTCCTGCAACTGAGATCGATGCTTGTCTTGACATTAAGCTTTTGGA
GATAGCAAAATCGAATGGCTCCGCGTCTGTTTCTTTGCCAACTGCATCCG
TTTCTTCTGGGACAAGTGTTTCTCGACTTCCAAAGATAGAGCTCCCTACG
TTTAAAGGTGATCCGCTCAAGTGGCAAGGGTTTTGGGATCAGTTCAAGAT
TTCCATCCACGAAAATGAGCGCATAAACGACATTGACcgctttaattttt
tgaaaaaatatttggctGGCGAAGCCTTGGATTCGATTAAAGGTTTGACT
CTAAACTCTGATAATTACAAGGAAGCCATAGAAATATTATGCGAGAGGCG
CAGATTGCGAAAGAGGAGGGTACCGTTCATTACATTCCCCATAGACCAGT
TATCCGTGAAGACAAGGTCACCACTAAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:352582..355853 + |
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