MSTRG.16484.1.p1 (mRNA) -

Overview
NameMSTRG.16484.1.p1
Unique NameMSTRG.16484.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:308046..308921+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16484.1.p1 ID=MSTRG.16484.1.p1|Name=MSTRG.16484.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=876bp|location=Sequence derived from alignment at sc0000156_pilon:308046..308921+ (Clytia hemisphaerica_ch_hm2_pilon)
TAGAATATGTGGTAATTTGCTTCAAAAAGAAGGAGTTTTGGTAAGAAGTA
AAGCAGATGATATCctggattgtttttatttaaaaactaagaCTGATAAT
GACCAAATACATCCAAAATTCATATGTTTGAAGTGTTGTGCACAATTAAA
TGCAATCAAAAAACGTGTTTCCACCGTGAAGCATCTGGTGATAGATTGGC
CTGAACATTCCGAAGAGGGTTGTTGGGTCTGTGTAACAGCTGAGTCCACC
CAGACTAATCCAGTAGGTCGCCCGAAGAAAGCCAAATGTAGGAAAGGTCG
ACCTGCAGCAACATCAGTACCGACATTATGGACACGGTATGACAGTCGGT
ATCTTATGAATCAGGTTCCGGCAGCATTGAAAAATGTTGGTTATAATACT
GTGTCATTAAATTCTTTTACTCAAGATAATTTCACTGAGCTGGTAAAGTG
TCCTGTTTGCTACAAGCTTATCGACAAGCCATTCCTGCTATTATGTCAGC
atgttgtttgtttgttgtgCCTGCTAAGTCGCATTGAAGGCAATGAACTT
CTACAATGTAAATGTCCATGTACATCATGTGAAGCAATGGTCAATCCATC
AACTGTTGTTTTTTCTCAGCAAACCATTGACATTATAGAACGTTTGAAAC
CAGCAACCgctaccaaagaaatcaaacTAAAAGATGTGTTTTTGTTGAAT
AGTGCTGATAGAGTTCCACGAGACTTTGAAGAAGCAGCCGTACATATCAT
CAAAACCAAATTATCTCAATCTTGTGACAAGTCTATATCGTTTAACACTG
GTGGATCAAGGGTAAGCCAATCTGCAAATAAAAAGATAACAACTGTAAAA
TACAATACCTAAAGGTTTGAAAAAAG

Coding sequence (CDS) from alignment at sc0000156_pilon:308046..308921+

>MSTRG.16484.1.p1 ID=MSTRG.16484.1.p1|Name=MSTRG.16484.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=861bp|location=Sequence derived from alignment at sc0000156_pilon:308046..308921+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATATGTGGTAATTTGCTTCAAAAAGAAGGAGTTTTGGTAAGAAGTAA
AGCAGATGATATCctggattgtttttatttaaaaactaagaCTGATAATG
ACCAAATACATCCAAAATTCATATGTTTGAAGTGTTGTGCACAATTAAAT
GCAATCAAAAAACGTGTTTCCACCGTGAAGCATCTGGTGATAGATTGGCC
TGAACATTCCGAAGAGGGTTGTTGGGTCTGTGTAACAGCTGAGTCCACCC
AGACTAATCCAGTAGGTCGCCCGAAGAAAGCCAAATGTAGGAAAGGTCGA
CCTGCAGCAACATCAGTACCGACATTATGGACACGGTATGACAGTCGGTA
TCTTATGAATCAGGTTCCGGCAGCATTGAAAAATGTTGGTTATAATACTG
TGTCATTAAATTCTTTTACTCAAGATAATTTCACTGAGCTGGTAAAGTGT
CCTGTTTGCTACAAGCTTATCGACAAGCCATTCCTGCTATTATGTCAGCa
tgttgtttgtttgttgtgCCTGCTAAGTCGCATTGAAGGCAATGAACTTC
TACAATGTAAATGTCCATGTACATCATGTGAAGCAATGGTCAATCCATCA
ACTGTTGTTTTTTCTCAGCAAACCATTGACATTATAGAACGTTTGAAACC
AGCAACCgctaccaaagaaatcaaacTAAAAGATGTGTTTTTGTTGAATA
GTGCTGATAGAGTTCCACGAGACTTTGAAGAAGCAGCCGTACATATCATC
AAAACCAAATTATCTCAATCTTGTGACAAGTCTATATCGTTTAACACTGG
TGGATCAAGGGTAAGCCAATCTGCAAATAAAAAGATAACAACTGTAAAAT
ACAATACCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16484MSTRG.16484Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16484.1.p1.exon1MSTRG.16484.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16484.1.p1MSTRG.16484.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:308046..308921 +