MSTRG.16476.1.p1 (mRNA) -

Overview
NameMSTRG.16476.1.p1
Unique NameMSTRG.16476.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:163967..165189-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16476.1.p1 ID=MSTRG.16476.1.p1|Name=MSTRG.16476.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1223bp|location=Sequence derived from alignment at sc0000156_pilon:163967..165189- (Clytia hemisphaerica_ch_hm2_pilon)
TATTTTTACATATTAAAGTCGAGACTTCCTTGTCTCATTGCTGTATAAAA AGTCAGAATTTTTGACTTCCAAAATCATTCAACTTGCTCAAGCAAGCAAG ACAATCAACAGAATGAAGATTTGGAAAGCTTTGCTGCTTTTGGCACTTTG TGTCTACGCAGTGCATTGTAAGTTTTACAATTTATTTCACCTTCCAAATC GAATTTTTGTAACTTGTCGTTATCAGAACAGATATCATCTCAAGGCAAAG AGAATGAATATCATTTAGTCATTTCGGATCTTTTTGTCTATATTTGATAA ATCATGTTTGTCGTAATAATAATTTTCTTAACAATTTTTGTGTTCAGGTA CGGAAGAGAGCGAACAACAAGACAATGCTATCGCCGATCAACAACAACAG GATGGAGAAGACGACCAATCGCAAGACATGATGACGTCATCACAAGATGA AGAAGATATCGTAGAGCAAGATGAGAGCTCATTGGACGAAGTCAAAGATG AAGAAGGTATGTTGTAAATCCTTTAATCCATTGGATGGGGTTTTTTGCTC TGTTTCATCTCTTATTCTATTTTTCCCTGGTATTTAGGCCTCTTTACATG TTCACTTGCTTTCTCTACTTATATCAGACTTAGATTACAACTTAAGGGTC AGTTTGACCTTTGCCTTACATAGAATCTGAATCTTAAATCATTCTTCTTT CTTGGAAGTGATTAGAAATGATCTTTTTACTGGTCGGTGTCCAGCACATG TTATGCGAGAGAATTTATTTTTTCATTATTGTGAGATCTGACTTCACAAA TTTGTTGAAATTATTTCAATACAGCAGACCTGAACGATCCGAAACCGTTG CTATGGCGGCGACGTCGCCGACGAAGACACCGAAGACGACACGGTTTCCG AAGACGATTTGGTTTCCGAAGACGATTTGGTTTCCGAAGACGATTTGGTT TCCGAAGACGTCGCCCTTATTACCCGGGTGGATATCCATACGGAGGCGGC TACCCATACGGTCGATACCCTTACGGACCTGTCGGACGTCCATACCCTCA CAACAAGCGTTATGGAAAATAATTCATCTCACGACATGACATTGATATTG TAATTCTCACGGGTAATGGTGTTTGGGACCTTTTTTTTGTAATGTTAGGA AAACTTTATCTTACTACTCATACTCGAAATATATCATTATTTTCGAAGAA AAAAATTCATAATTTTCGTTTCA

Coding sequence (CDS) from alignment at sc0000156_pilon:163967..165189-

>MSTRG.16476.1.p1 ID=MSTRG.16476.1.p1|Name=MSTRG.16476.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000156_pilon:163967..165189- (Clytia hemisphaerica_ch_hm2_pilon)
CAGACCTGAACGATCCGAAACCGTTGCTATGGCGGCGACGTCGCCGACGA
AGACACCGAAGACGACACGGTTTCCGAAGACGATTTGGTTTCCGAAGACG
ATTTGGTTTCCGAAGACGATTTGGTTTCCGAAGACGTCGCCCTTATTACC
CGGGTGGATATCCATACGGAGGCGGCTACCCATACGGTCGATACCCTTAC
GGACCTGTCGGACGTCCATACCCTCACAACAAGCGTTATGGAAAATAAGT
ACGGAAGAGAGCGAACAACAAGACAATGCTATCGCCGATCAACAACAACA
GGATGGAGAAGACGACCAATCGCAAGACATGATGACGTCATCACAAGATG
AAGAAGATATCGTAGAGCAAGATGAGAGCTCATTGGACGAAGTCAAAGAT
GAAGAAGATGAAGATTTGGAAAGCTTTGCTGCTTTTGGCACTTTGTGTCT
ACGCAGTGCATTCAGACCTGAACGATCCGAAACCGTTGCTATGGCGGCGA
CGTCGCCGACGAAGACACCGAAGACGACACGGTTTCCGAAGACGATTTGG
TTTCCGAAGACGATTTGGTTTCCGAAGACGATTTGGTTTCCGAAGACGTC
GCCCTTATTACCCGGGTGGATATCCATACGGAGGCGGCTACCCATACGGT
CGATACCCTTACGGACCTGTCGGACGTCCATACCCTCACAACAAGCGTTA
TGGAAAATAAGTACGGAAGAGAGCGAACAACAAGACAATGCTATCGCCGA
TCAACAACAACAGGATGGAGAAGACGACCAATCGCAAGACATGATGACGT
CATCACAAGATGAAGAAGATATCGTAGAGCAAGATGAGAGCTCATTGGAC
GAAGTCAAAGATGAAGAAGATGAAGATTTGGAAAGCTTTGCTGCTTTTGG
CACTTTGTGTCTACGCAGTGCATTCAGACCTGAACGATCCGAAACCGTTG
CTATGGCGGCGACGTCGCCGACGAAGACACCGAAGACGACACGGTTTCCG
AAGACGATTTGGTTTCCGAAGACGATTTGGTTTCCGAAGACGATTTGGTT
TCCGAAGACGTCGCCCTTATTACCCGGGTGGATATCCATACGGAGGCGGC
TACCCATACGGTCGATACCCTTACGGACCTGTCGGACGTCCATACCCTCA
CAACAAGCGTTATGGAAAATAAGTACGGAAGAGAGCGAACAACAAGACAA
TGCTATCGCCGATCAACAACAACAGGATGGAGAAGACGACCAATCGCAAG
ACATGATGACGTCATCACAAGATGAAGAAGATATCGTAGAGCAAGATGAG
AGCTCATTGGACGAAGTCAAAGATGAAGAAGATGAAGATTTGGAAAGCTT
TGCTGCTTTTGGCACTTTGTGTCTACGCAGTGCATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16476MSTRG.16476Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16476.1.p1MSTRG.16476.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16476.1.p1.exon3MSTRG.16476.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16476.1.p1.exon2MSTRG.16476.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16476.1.p1.exon1MSTRG.16476.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:163967..165189 -