MSTRG.16474.1.p1 (mRNA) -

Overview
NameMSTRG.16474.1.p1
Unique NameMSTRG.16474.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:154217..155099+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16474.1.p1 ID=MSTRG.16474.1.p1|Name=MSTRG.16474.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=883bp|location=Sequence derived from alignment at sc0000156_pilon:154217..155099+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCTATTGAACAGGAAAGAATTGGACGGTTTCGCAACCAGcgattataa
aaaaacatgttggGGTGTTCGCAGTCTAAACTGGAATGCTATAAATAGCT
TTTCATTCTAGTTGAGAATTGTATTCATCTGCTCTCATCTTTGATTCAAG
ATGTTGAAAGTCAAAGAGATGATACTTGTTGTTGtgttcttgatttttca
agttcaaacgGCTATTGGATGTGAGGTTCAGTATGGTCTTAACTATCCAC
GGCACAACATTGATTCGAAGATTCTGGGTACCTGGCAAGAATGTGCTATT
TGGTGCGACACTGTGCCTGGCTGCAACTTTTGGACATGGGTTCATAACGA
AGCCGGTGGGTCTAACCAACTTAGATGCTATCTAAAATCGCAAGGAGTAA
TTAGTGGTATCAATAAAAATTGGAGAGCGGTTTCAGGATCTAAAGGATGC
ACCAACTCAGTTCAGCACAATCGTTGCACACCACACTATGGCCGATTTTG
GTATGATTGTGGTTCTTTTGTGAACTTCTTCCCTATCCTAACTTGGCAAC
ATTGTGCTGATGTATGTAGTACACTAGCAGAGTGCCATCATTGGCAATGG
AAACATGATGTAAAGAAATGCTATACTCGTACAGGGGGGATAGCCAACAC
TTGTCAATTGACCCAGAACCCAGATTTTGTAAGCGGCATTCGAAACTGCC
AACAAGCGGAATTCCAACAccttaaattattttaatataCATCATGATCG
ATATTGAAAGAGTAGAAAATAGattgaattgaatattttgtttcaagatt
tcttttttactctttttccttttgttttgtttttgctttttgctttttta
atttttcatttgcaactttctttttcaaaaaac

Coding sequence (CDS) from alignment at sc0000156_pilon:154217..155099+

>MSTRG.16474.1.p1 ID=MSTRG.16474.1.p1|Name=MSTRG.16474.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=585bp|location=Sequence derived from alignment at sc0000156_pilon:154217..155099+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAAGTCAAAGAGATGATACTTGTTGTTGtgttcttgatttttca
agttcaaacgGCTATTGGATGTGAGGTTCAGTATGGTCTTAACTATCCAC
GGCACAACATTGATTCGAAGATTCTGGGTACCTGGCAAGAATGTGCTATT
TGGTGCGACACTGTGCCTGGCTGCAACTTTTGGACATGGGTTCATAACGA
AGCCGGTGGGTCTAACCAACTTAGATGCTATCTAAAATCGCAAGGAGTAA
TTAGTGGTATCAATAAAAATTGGAGAGCGGTTTCAGGATCTAAAGGATGC
ACCAACTCAGTTCAGCACAATCGTTGCACACCACACTATGGCCGATTTTG
GTATGATTGTGGTTCTTTTGTGAACTTCTTCCCTATCCTAACTTGGCAAC
ATTGTGCTGATGTATGTAGTACACTAGCAGAGTGCCATCATTGGCAATGG
AAACATGATGTAAAGAAATGCTATACTCGTACAGGGGGGATAGCCAACAC
TTGTCAATTGACCCAGAACCCAGATTTTGTAAGCGGCATTCGAAACTGCC
AACAAGCGGAATTCCAACAccttaaattattttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16474MSTRG.16474Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16474.1.p1.exon1MSTRG.16474.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16474.1.p1MSTRG.16474.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:154217..155099 +