MSTRG.16471.1.p1 (mRNA) -

Overview
NameMSTRG.16471.1.p1
Unique NameMSTRG.16471.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000156_pilon:142993..143952+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16471.1.p1 ID=MSTRG.16471.1.p1|Name=MSTRG.16471.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=960bp|location=Sequence derived from alignment at sc0000156_pilon:142993..143952+ (Clytia hemisphaerica_ch_hm2_pilon)
tctagGTGGCAAATCAAGGACAATCAACTATCGGGGAGCAAACCATGAAA TGGGAACCTGCTATTTATCTACAGACTATGAGCACAATATTCTCCGCCTT GTCAATCAATTTACCCAGAGCGCCACTAAACGTCCACCCATTGCAAGTGT TTGGTCACGCATTACACCTAACAGTAGCGTCACTTTCAATCATAACTACT CCATggtattaaaaatgaaatacccGAAATTGAATATGATGGAGATACAA AGCTTATTCTTACGTAAGCTGAAGACATATGTTTATCTCCATAAGACAAT GTTTGGAGATTACTACGGAGAAATCATGCCACAACCGTCGCCTCAAACTA TGGAGAAAATCAAAGGTAAAAAGTCGAGGGTTTCAGATTGATAaaacttt gttcttatatttaaAATCCTTTCTTGTATACTTAAAATCCTTTAGATTTT GGATATTTTCACTCTGTTGTGTCGCGTGCAGGGTTAGTAGTGTCTGGTGT GGCAATTTCCCTATCCTAGGGTAAGGCTCATTCCGGATGATTCGGAGGCT TCACTTCTCTTCTCTTTTCAAAGTTGCGCCATATTTTCTTAGTAGGGGAC AAACCAGACAGAGCACGAGGTTTGTTGTAATTgcgcaaaatttaagaaat ggtATCAATCGTTTTCGTTCAATTCAATGTCaaaaaaaTCGTCAAcaaaa tcctatctactttcgaacAATCACACGAGGTTGCATCCCACGAAAGATCA GGATTTCTCCCCTTCTACCTTAGGCAgcgcttttcttttttttcaaaaat gttcagTATATTCCTTTGCATTTTCAGGGacgtttttggattttttggag CCAAACGGTCTTGCTGATCTGGAAGAAATGTTTACAGCATCTCACACATT GCAAGGATACGGAAGAATCTCGGAAATTCCGGCACTTTATGGGCTGATGT GGAATACACC

Coding sequence (CDS) from alignment at sc0000156_pilon:142993..143952+

>MSTRG.16471.1.p1 ID=MSTRG.16471.1.p1|Name=MSTRG.16471.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000156_pilon:142993..143952+ (Clytia hemisphaerica_ch_hm2_pilon)
ctagGTGGCAAATCAAGGACAATCAACTATCGGGGAGCAAACCATGAAAT
GGGAACCTGCTATTTATCTACAGACTATGAGCACAATATTCTCCGCCTTG
TCAATCAATTTACCCAGAGCGCCACTAAACGTCCACCCATTGCAAGTGTT
TGGTCACGCATTACACCTAACAGTAGCGTCACTTTCAATCATAACTACTC
CATggtattaaaaatgaaatacccGAAATTGAATATGATGGAGATACAAA
GCTTATTCTTACGTAAGCTGAAGACATATGTTTATCTCCATAAGACAATG
TTTGGAGATTACTACGGAGAAATCATGCCACAACCGTCGCCTCAAACTAT
GGAGAAAATCAAAGGGacgtttttggattttttggagCCAAACGGTCTTG
CTGATCTGGAAGAAATGTTTACAGCATCTCACACATTGCAAGGATACGGA
AGAATCTCGGAAATTCCGGCACTTTATGGGCTGATGTGGAATACActagG
TGGCAAATCAAGGACAATCAACTATCGGGGAGCAAACCATGAAATGGGAA
CCTGCTATTTATCTACAGACTATGAGCACAATATTCTCCGCCTTGTCAAT
CAATTTACCCAGAGCGCCACTAAACGTCCACCCATTGCAAGTGTTTGGTC
ACGCATTACACCTAACAGTAGCGTCACTTTCAATCATAACTACTCCATgg
tattaaaaatgaaatacccGAAATTGAATATGATGGAGATACAAAGCTTA
TTCTTACGTAAGCTGAAGACATATGTTTATCTCCATAAGACAATGTTTGG
AGATTACTACGGAGAAATCATGCCACAACCGTCGCCTCAAACTATGGAGA
AAATCAAAGGGacgtttttggattttttggagCCAAACGGTCTTGCTGAT
CTGGAAGAAATGTTTACAGCATCTCACACATTGCAAGGATACGGAAGAAT
CTCGGAAATTCCGGCACTTTATGGGCTGATGTGGAATACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16471MSTRG.16471Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16471.1.p1.exon1MSTRG.16471.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16471.1.p1.exon2MSTRG.16471.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16471.1.p1MSTRG.16471.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156_pilongenomesc0000156_pilon:142993..143952 +