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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:47121..52593- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16469.1.p1 ID=MSTRG.16469.1.p1|Name=MSTRG.16469.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5473bp|location=Sequence derived from alignment at sc0000156_pilon:47121..52593- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAATTTTAAACATTTCTTCCGATAATTGATAGGGAAAACATCAAGAAA
ACATCATTTAAAAGAGCTTTTAAATGACGAAGATGCATATTCAAATGGTG
CTGAAGTGGTTCACGATTCTTCTGTTGTTTCTAAACAAAGATTCTGATTG
CAGTGAGCTGTATGAGAAAACAGAACAGTTGCAATTTCACTTGAAGATGG
GGAAGATTGCAAAAGGGAGCATCTCGCTTGTTCAATGTTTGTTGATGTGT
AGTGTACACGAATGTGATGTGGTGGGGTATTTACCCCTGGTCGAAGCATG
TATTTTGTACGAAGAAAGCAAACAAATGATGATATTTGATGAAGACGATG
GAATAGATTTATACGTCCCAAGAAAAATGCAAAAGGTAAATTATTTCAGT
CTGTAGGCCAATTTGTCGTTTTATGGGTGTGATAGTCGGCCATTAACGTG
CAACATCCCCAGTTGGGCCCTTGTACACTTGCCTGAAAATGACTTCATTG
GGCCCGACAGGACTGCGAAATCCTTGACGCAGCCTGGTGTAACTAATCTA
AACTTTCCAGATGTTGATAATTTTCCGACATCCAGAGCTTTAGCGTATCG
GAAGAAAATTTCAACATCTGTTGTCAGATAAGGGTTTGAGTAGCCCTAAA
CTGATACTTCTTTTTTCATGCAATTGAAGAGTTATTGTGGTATCTTATCC
ATTTTCTCAGTTTCCTACCGTAGATAAATTTTATATCAAAATCACCATAT
ATGACTAAAAATAACAAATGCAATAATATAGCTAGGGGGGGTCCAAAATT
ATGAGTTTAACCATCTTTTTTAAATTAATTTTTCATGCTGATTCCGAATT
TGAAATCCGTTTTTCTATATCTCTTACCCCTGGGCGGCTACCGGAGACCC
TTTTTTCGGAAAACCGCCAAAAACCGCTAAAAGTAATTTTTTTGAAATTT
TCCATATTTATGAATAGCTTTCTAGTGATGTGATATCTTTTTTAAATCAG
TTTTTCATGCTGATTACGAATCTGAAATTCATTTTGTCATAGCCGTCACC
CTTGGCCTGGTATAGGAGGCTGTTTTTTTACTAAAATCTTCGAATCCAAG
GAAAATTTATTATTTGAAAATTTTTGGACATTCAAAAGTTGATATTGGCT
TTAACAAGCCGTATATCATTGTTTGAAAGGTTAAGTTACAATGAAAATCA
TAGGGATATATAGACCTTATTATACCAAATAGATAGAATCTAAAAATCCC
ACATTCGAATAGTTGTTTATTGAACCAATCGAAAGGCACTATTGTTTTAT
CCATCCCTTAAATACTTGCTTGAATAGATTTGAAGAAGTAAGGGTAATGC
TTTTTACAAATAAACCAGACCTTAAGCTGTTGATTTAATTACAATATTAT
TGGTGTCAATTATTAAGGACTTCCACAAAATATGACTATCTGTTCAAACA
AGGGTTCTTTGAGAAGTTAATTAGAAAAAAGTTTTGAGAAATTAAATTAT
CTTGTGAACTTCTAAGTAGTAAATCGCCCCTCCTTTCCAGGGAGATAACC
ATGTAAATGCTTTCATATTGGTCCATCATTTGTTTGGAAGTTACTTTTTA
GGAATAGGTTATATTTCTTAAACATTGGTATCTTTCAATAGATTCACTAT
AAACCTGTTCTTATATGACTTGTTTGAATTAAAATTATTTGAAAAATTCC
ATATATCAGCTATCTGTATAACCAAGTGATTTTAATTTTAACTCACCCCT
TAAATGATTAAGGCTTCTTACAAACAATTATCAACTTTTCAATGTTCAAT
TGATTTAGGGAATCATTGTATTTGAAAGGATTTCACTAGCTCAAGATATT
TTAAACGAGATTCTAAGCAGGTTGAATTTTGCTTCATGACTAGTTGAGCA
GATAAATTCATAGCAGACAAAGGGTTAGCTCATTGGATAAAGATAAAATA
CTCAAGACACCCTATGACGATGAATGTATAACATTAGCCAAGTGTCAAAA
AGCCACAGAAGAACTAAAAGCTTAGAAATATCCTTTCAATAATATCGATC
TTTTCACATTTTCTGCAATATTTTCTGAATAAGGAACCTCATGTAGCCGA
CCCCGTAGCAGGCCATAGGTAGGAGATATGCAAAAACTGATTTGAAATTC
GAAATCAGCATGAAAATCTGATCTAAAACAAGTTGTTATCGTTATATTTT
TCATTCAAAGTTCATTCAAATTCAAACATTTTCGAATTATAAATTTTCCT
TGGATTCGAAGATTTTAGTAAAAAAACAGCCTCCTATACCAGGCCAAGAG
TGACGGCTATGACAAAATGAATTTCAGATTCGGAATCAGCATGAAAAACT
GATTTAAAAAAGATATCACATCACTAGAAAGCTATTCAAAATGGAAAATT
TCAAAAAAATTGATTTTTAGCGGTTTTGGGCGGTTTTCCGAAAAAAGGGT
CTCTGGTAGCCGCCCAGGCTTTTAAGTTCTTATTCACTAATTCTTAATGG
AGTGAATTTTTTTATCCGTCTAAAAATATGAAAGAGACTGGCTTCTGATG
TATTTCATATGCTTTCTACCTTCTAGTTTAAAGCAACAAGAACATTTAAA
GCAAAGACGATGAGTTGTGTAGACCAATATCATATTGGTGGAAATTGTTC
AGTTATCATAGGTGAAGTTTCATAGTTACTAGTCCCCCTCTTAGGTAGGA
ACCCCCCCCCCCCCTCTAGGTAATACATTTGAAAATTCAGACCCCTCATG
GGGTTCTAAATCTACAGTCTACTAAAATCTACATTTTCATTGTTCTTTTC
AAAATATTCTTTGTGACGTGTACGTGTGTTAAAAATTGAAAAGAGAATCA
ATTCTCGCCACATCTACCACCGTGTAAAGGCCGCTCTCCACTTGCACGCG
CTTCAATCGCGTATTTTCGAGCAAAGCTTCCACGCTATTGGTCAAAAGAA
AAATGAAGCAACTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTT
AAAATGTGTTCAACTTTTTTTTCCAGCGCGCGCTACATTTTTATGACGTA
ATCTTTTTTCCAAGCAAAAAAGATTGAAGTCAAAAAGTACGATCACAGCG
CGCGCAAGTGGAAACCGGCCTTAAGACACAATGTTCCATTACATGTGTAA
GAAACAAGCTCCTGAATTTCCAAAACTAGATCAAGGTTGATGTTTGTTTA
TCTTCCTAAATATAGGGTGGAACTAGTGGTAGAAACAATGATTTTACTTT
AATCATCTTTGATATTCCGTTCTTCTTGCACACCATGTATGTTAACTTGG
TTCTTCGTACACCAATTTTTGTATATATAATGGTCATACTAATTTGCTTA
ATTTTGAAAGAGCTGTGTGAATTTAAGGCCTTTAAAATAACGGACCAAAA
TACAATGGCGATTGATATTCCTCAACATCGGGGATACAAATTTTTTCTGG
AATAGCCCAATTGTGGTTGCAATACCGAAAATAAACTCCAAACAGATATA
GTACATTCTGAACCAAGCTGTTCCATCATTTCTTAAAACAGATCCAAAGG
TGATCTTAGACGAAACATGCAAAGAAGCTGATCCCAACAGACCAATTGCC
ATCTTCCAAGTGATTAATGGTAATTTTCTTTGGAGATGCCATAACGTCAA
CACATTAAGTGCTGATCACCTGTTTTATGTCAATGGAAGTGATTATGATG
AATCTATGAATTATAGATTGCTTACATTGATTGATAATCATCCTTACTGT
AAGTAGTGGGTATTGTTTGACTATCATCGCCGTACAATGAAAATAATTTC
TAATTTGTATGTCTTATATTACCAAAGCACATTAATCTTTCAACTATTGG
ACTTGAGTCAAACTTGATCAACTCGAACCTCTAAGATGACTTTTCCAAAG
GATGTTGACACAGTTTTCGGTTTTAATGAACTGAATTTTTCCCCAGCTAA
AATAAACTGTGATAGTTTGTAGAAAGGGTGAGCCCCCCCCCCCCAAGTTA
AATTCACCCCGCCCCCCCCCAAAGTTAAATTCCCCCCCCCCCTTTTGTAA
TGAAACCTTATCCCCCTTTTTTACAGAAAATCTGAACTCGCTCTATGCGC
TAAAAAATATAGCTAGTGTGTTTTTAGCATGATGTACATTTTTGTGCTTT
GTTGGTACATATTTTTACTTTAAAACATACTGTAGCCATTTGTATGTGAT
AAAATTGACCAAAAATCTCCAACCCTGGCTTCTTATTTGATCCCACCCTA
CATTCCCATCGCCTTCAATTTTTCTTGGCAAATCTTGGTACCCCCCCCCC
CCCCCTCCTGCTACAAATTGAAATCCCTCTATAAAGAGAAGGGAGTGCAA
TCTATGGTTAGGTACACGTTTTTATAAGAACATCCTATATTTTCAAAGCC
TTCGAATGTTCTTAACTTTTTGAATTTTAAATTATTAATATAAAAATATG
ATCTGAAGATGTTCTTAATTTGACCATTTTGGGAGCAGCCATTATTGAAT
CTAAATTCTAAACAATACTATTTTCTTTTCAGACAAAGACTCGCACTTCA
TTCTCTCTGTTTTGATCAGCTGTACAATGAAGTGTACGAAAATCGGCCGA
ACCTGTCAACCAACCTTCACTGCCAATTCCATCTATCCTTTCTACAAAGC
TGGAAAGATTTGCAACAATAACAAGATTGATGTAACTCACGATGGTGCTA
GTTTTTGGCATATAGACGCAGAACCTTTGGTATCTCCTGATCAATGTAAA
GGTTTCATCAATGTTGAAGCTTTTAGTTGTGAATCTACTGCTCCTCCTGG
TGAAGACAGATTGTGCAGGTGTACTTGATAGAACTACACTACCATTAGAA
TGAGATCATCATGTTTTATTGCATATTTTCAAACATTCAAAAAGAAAGCA
AACTCATCAGTGTAATGGGCCTTTCCAGAATTCTTCCATACCCCTCCCCC
CTGTTGAGGATATCCATTTTTCAAGTTCCACAGCCCTCTGGATGTCTGGC
CAAAAATAAAGACCGCTGGATTTCCTGGATGTCCAAGTGGATAGAAGGGT
CGAGAATGTCCACACATTTTGTCCTCCACCCCCTGGATATCCATATATTT
TGTCCTGTACCCCTTGTATATCCATACATTTTGTCCTGTATCCCCTGGAT
ATCCATATATTTTGTCCTGTATCCCCTGGATATCCATATATTTTGTCCTG
TACCCCCTGGAAATCCATACATTTTGTCCTGTATCCCCTGGATATCCTCA
CCCTCTAATAACGTCCTATTCCCTTAATATGCAGATAGCATTGAACCCCT
TGATGTCCGATATCCTTAAAAGAGGGGACACAGACTATTTCTGGAAAAGC
CTATGTTTAAGCAATAATAACTATTATGAATAAAATTCTTACCAGAGCTG
TATCTTTCAGTTCAAGTTCTGTCAGGACAACATTTCCTGGAAAGATAAAA
AAAAGAAATAGTAATAAGATTAA Coding sequence (CDS) from alignment at sc0000156_pilon:47121..52593- >MSTRG.16469.1.p1 ID=MSTRG.16469.1.p1|Name=MSTRG.16469.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000156_pilon:47121..52593- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAAGACTCGCACTTCATTCTCTCTGTTTTGATCAGCTGTACAATGAAG
TGTACGAAAATCGGCCGAACCTGTCAACCAACCTTCACTGCCAATTCCAT
CTATCCTTTCTACAAAGCTGGAAAGATTTGCAACAATAACAAGATTGATG
TAACTCACGATGGTGCTAGTTTTTGGCATATAGACGCAGAACCTTTGGTA
TCTCCTGATCAATGTAAAGGTTTCATCAATGTTGAAGCTTTTAGTTGTGA
ATCTACTGCTCCTCCTGGTGAAGACAGATTGTGCAGGTGTACTTGAATCC
AAAGGTGATCTTAGACGAAACATGCAAAGAAGCTGATCCCAACAGACCAA
TTGCCATCTTCCAAGTGATTAATGGTAATTTTCTTTGGAGATGCCATAAC
GTCAACACATTAAGTGCTGATCACCTGTTTTATGTCAATGGAAGTGATTA
TGATGAATCTATGAATTATAGATTGCTTACATTGATTGATAATCATCCTT
ACTTTTAAAGCAACAAGAACATTTAAAGCAAAGACGATGAGTTGTGTAGA
CCAATATCATATTGGTGGAAATTGTTCAGTTATCATAGATGACGAAGATG
CATATTCAAATGGTGCTGAAGTGGTTCACGATTCTTCTGTTGTTTCTAAA
CAAAGATTCTGATTGCAGTGAGCTGTATGAGAAAACAGAACAGTTGCAAT
TTCACTTGAAGATGGGGAAGATTGCAAAAGGGAGCATCTCGCTTGTTCAA
TGTTTGTTGATGTGTAGTGTACACGAATGTGATGTGGTGGGGTATTTACC
CCTGGTCGAAGCATGTATTTTGTACGAAGAAAGCAAACAAATGATGATAT
TTGATGAAGACGATGGAATAGATTTATACGTCCCAAGAAAAATGCAAAAG
ACAAAGACTCGCACTTCATTCTCTCTGTTTTGATCAGCTGTACAATGAAG
TGTACGAAAATCGGCCGAACCTGTCAACCAACCTTCACTGCCAATTCCAT
CTATCCTTTCTACAAAGCTGGAAAGATTTGCAACAATAACAAGATTGATG
TAACTCACGATGGTGCTAGTTTTTGGCATATAGACGCAGAACCTTTGGTA
TCTCCTGATCAATGTAAAGGTTTCATCAATGTTGAAGCTTTTAGTTGTGA
ATCTACTGCTCCTCCTGGTGAAGACAGATTGTGCAGGTGTACTTGAATCC
AAAGGTGATCTTAGACGAAACATGCAAAGAAGCTGATCCCAACAGACCAA
TTGCCATCTTCCAAGTGATTAATGGTAATTTTCTTTGGAGATGCCATAAC
GTCAACACATTAAGTGCTGATCACCTGTTTTATGTCAATGGAAGTGATTA
TGATGAATCTATGAATTATAGATTGCTTACATTGATTGATAATCATCCTT
ACTTTTAAAGCAACAAGAACATTTAAAGCAAAGACGATGAGTTGTGTAGA
CCAATATCATATTGGTGGAAATTGTTCAGTTATCATAGATGACGAAGATG
CATATTCAAATGGTGCTGAAGTGGTTCACGATTCTTCTGTTGTTTCTAAA
CAAAGATTCTGATTGCAGTGAGCTGTATGAGAAAACAGAACAGTTGCAAT
TTCACTTGAAGATGGGGAAGATTGCAAAAGGGAGCATCTCGCTTGTTCAA
TGTTTGTTGATGTGTAGTGTACACGAATGTGATGTGGTGGGGTATTTACC
CCTGGTCGAAGCATGTATTTTGTACGAAGAAAGCAAACAAATGATGATAT
TTGATGAAGACGATGGAATAGATTTATACGTCCCAAGAAAAATGCAAAAG
ACAAAGACTCGCACTTCATTCTCTCTGTTTTGATCAGCTGTACAATGAAG
TGTACGAAAATCGGCCGAACCTGTCAACCAACCTTCACTGCCAATTCCAT
CTATCCTTTCTACAAAGCTGGAAAGATTTGCAACAATAACAAGATTGATG
TAACTCACGATGGTGCTAGTTTTTGGCATATAGACGCAGAACCTTTGGTA
TCTCCTGATCAATGTAAAGGTTTCATCAATGTTGAAGCTTTTAGTTGTGA
ATCTACTGCTCCTCCTGGTGAAGACAGATTGTGCAGGTGTACTTGAATCC
AAAGGTGATCTTAGACGAAACATGCAAAGAAGCTGATCCCAACAGACCAA
TTGCCATCTTCCAAGTGATTAATGGTAATTTTCTTTGGAGATGCCATAAC
GTCAACACATTAAGTGCTGATCACCTGTTTTATGTCAATGGAAGTGATTA
TGATGAATCTATGAATTATAGATTGCTTACATTGATTGATAATCATCCTT
ACTTTTAAAGCAACAAGAACATTTAAAGCAAAGACGATGAGTTGTGTAGA
CCAATATCATATTGGTGGAAATTGTTCAGTTATCATAGATGACGAAGATG
CATATTCAAATGGTGCTGAAGTGGTTCACGATTCTTCTGTTGTTTCTAAA
CAAAGATTCTGATTGCAGTGAGCTGTATGAGAAAACAGAACAGTTGCAAT
TTCACTTGAAGATGGGGAAGATTGCAAAAGGGAGCATCTCGCTTGTTCAA
TGTTTGTTGATGTGTAGTGTACACGAATGTGATGTGGTGGGGTATTTACC
CCTGGTCGAAGCATGTATTTTGTACGAAGAAAGCAAACAAATGATGATAT
TTGATGAAGACGATGGAATAGATTTATACGTCCCAAGAAAAATGCAAAAG
ACAAAGACTCGCACTTCATTCTCTCTGTTTTGATCAGCTGTACAATGAAG
TGTACGAAAATCGGCCGAACCTGTCAACCAACCTTCACTGCCAATTCCAT
CTATCCTTTCTACAAAGCTGGAAAGATTTGCAACAATAACAAGATTGATG
TAACTCACGATGGTGCTAGTTTTTGGCATATAGACGCAGAACCTTTGGTA
TCTCCTGATCAATGTAAAGGTTTCATCAATGTTGAAGCTTTTAGTTGTGA
ATCTACTGCTCCTCCTGGTGAAGACAGATTGTGCAGGTGTACTTGAATCC
AAAGGTGATCTTAGACGAAACATGCAAAGAAGCTGATCCCAACAGACCAA
TTGCCATCTTCCAAGTGATTAATGGTAATTTTCTTTGGAGATGCCATAAC
GTCAACACATTAAGTGCTGATCACCTGTTTTATGTCAATGGAAGTGATTA
TGATGAATCTATGAATTATAGATTGCTTACATTGATTGATAATCATCCTT
ACTTTTAAAGCAACAAGAACATTTAAAGCAAAGACGATGAGTTGTGTAGA
CCAATATCATATTGGTGGAAATTGTTCAGTTATCATAGATGACGAAGATG
CATATTCAAATGGTGCTGAAGTGGTTCACGATTCTTCTGTTGTTTCTAAA
CAAAGATTCTGATTGCAGTGAGCTGTATGAGAAAACAGAACAGTTGCAAT
TTCACTTGAAGATGGGGAAGATTGCAAAAGGGAGCATCTCGCTTGTTCAA
TGTTTGTTGATGTGTAGTGTACACGAATGTGATGTGGTGGGGTATTTACC
CCTGGTCGAAGCATGTATTTTGTACGAAGAAAGCAAACAAATGATGATAT
TTGATGAAGACGATGGAATAGATTTATACGTCCCAAGAAAAATGCAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:47121..52593 - |
|
