|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:28426..31791+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16467.1.p1 ID=MSTRG.16467.1.p1|Name=MSTRG.16467.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3366bp|location=Sequence derived from alignment at sc0000156_pilon:28426..31791+ (Clytia hemisphaerica_ch_hm2_pilon)
ttgactatcaaaagttacagacatttttgtttccactgccaattatatct
ggatacactTTAGTCTTAATTTCAAGATAGATAGCCTTATGTCCAAGCTT
ATGTCCTTCTTTTTTACattcttgttatttttttttgcaaaattttgaat
aaaaaagctTTCATATATGTCCATAAAATTAGCGAACAAAAgggtgaaat
tttaaaacaattattGCAATACTTTACagcattttgaaaagaaatagaTG
AGGTAAGACTAGCCAGATTGTAATCTTctcaaaacagcaaaattttaatt
tccagCGACGAAATACTCATTTTGTGATATTGTTATTTTTCTAGCAAGCA
AATACAATTATCATACAATAATGATGGAGTCGTTTGGGAAAAAGAAACTA
GCCTGTAAAGATTTGTATGGCTACCTATTGACATTGTCATCTGAAGTTCT
CAATGGTCTTTATGACCACCCATTCACTTGTCTAGCTGTCTTCCGTGGTT
TACCTGAGATtggaaaacattacgtcatgagaACATTGTTCACAGACCAA
GCTTTCCCAGAGCACGTCATTTTATCTTGGTGCAAGAAAGAGCATCGTAA
TGACCACAAAGTAGCCGTCGATCGATTATGTGGATTACAAATTTGGAACA
GGGTTACGTCGCCTTCCGTACATTTtgaaatgaacaaatttttccagCAA
AACCTTCGAATAGGTGTTCGCGGTGGAGGGAAAATTGAAGAAGAGCCGCT
TAAAGCAGTGGAAGAGAGACATGCTCGAGATGTAACTTATTTAGATAATT
ATGCCAAAGAGCGATGGGAGTGCATATTACAATACATGACTGGCTCACAA
CAAGGAATGAATAATGTAGGAGTGAGTCCTGATGTTGCAAAAGTTTTGAT
TTCGTCGGGTTTGTTAACgttaaatgaaagtgaaaataacACTTCGATTA
CTTCCGCTGGCTTTCAGTTTTTGTTACTCGATACTTCTTCCCAAGTCTGG
TATTTCATGGTCCAGCATTTGAATTCTAAAGACAAAGCCGTTTTAGTGCA
ATGTTTAtcgtttttatttcaaactggATTCTCTGTACTTGGTAAAGACT
ACCCGGTCAAAAATTTGACAGCAGAACAGTTCAATTTTTTACAATTGCTT
CGTGAAGTTGGATTAGCGCATCAACGGAAGCGTACATCAAAAAGGTATTA
CCCGACTCGATTAGCCATTAACCTGGGCACTGCTGTGACTGGCAGTACCA
ACACAATATCACAAGGACAATCTTATTTAGTAGTAGAGACAAATTATCGT
GTTTACGCGTACACCGAATCTGCTCTTCAAGTGTCATTGCTTAGTTTGTT
CACAGACATCAAGTCACGTTTTCCAGACTTCACTGTCGGTACGTTGAGTC
GTGAAAGCGTGCAACAGGCCTTAGCATGCGGTATATCAGCTTCACAGATC
ATTGATTTTCTGAGGACAAGAGCTCGTCCTCAAATGTTAAGTAGAACACC
CATCATCCCTCCCACCATAACTGATCAAATAAAGTTGTGGGAGATGGAGA
GAGATAGGTTACGTTACACAGAAGGAGTTTTGTATAATCAATTCCTGGCG
CAAAGTGACTTTGAAATGTTACGTAGATATGCTGATGAGAATCAACACCT
TCTTTGGGCCAACAGTCAGAAACGTTTGATGGTCGTGTCTAAAGAAGGAC
ACGATGATGTGAAAAGGTActggaagaaaaataaaccatcTTAATTGAGT
TGTTGTTGGTTGATGATTAGATTTCTTATGTTGCttttttctcgttattg
ttttcatatttttctatagaattagttgtttctttttttctctattACAA
CCTAGTCATGTACCTTAATAAAAGCTAATCAAGGTTTTGAGAAAAACAAA
TCTCTCTTTCAATGAGAGCTGAGTTTTAAAAATATCTCTGCccattaaaa
aaattgtcaaaacagTCGGACCTTTGCAAGATTAGGCGCGCTTCCCTGAA
ATAGTTTTGTTATGAGGGCAAATCAGACTCGGAAAAACACTTCAAACTTT
TATGGCTGTGACCCtttttaattatcttttttcgccaaatttatacaaaa
aagcaaaaacgTAATACCTTGCGTACGATAATATCCTCCATCACTGAAAT
TTTAATGACGTCAAAACAATTCCCACctcaaaaaatttcctcaacAAAAA
CTTGCTAAGCGCACgtgattttaaggcttttttgcATCccttataacaaa
agaaatcaaagggGTATAAGGATCCCACCCAAAGATGCACTGctggttct
tatataaagaGGGTTGGTAAACAAATGTCTTTAAATCTTGATTATCTTGT
TTTATCACATATATGATAAAACAActtcttttttgaacatttaAGTTTGA
GTTAACTAGTTTTGGTTCTAGGAACTATGTGATGAAATGTTACCCTTAAT
GAAAATCAGGTTTTCTTTCGAATATTTGATAGTAAACAATCTAGACCTTA
TGTCTgtgttttcgaaaattgaaattttcatactCATAACAGATGCAAAA
GACGAACTTATAAATCCCTTTAATCTGTTTTTTCTTGTGAATCTTAAAGA
ATGGTtccaaactaattttctttcatttgctAGGAGCTTTGATAAGAGAA
CCTATACTAAACTGATTTGTGGTTTACTTTCAACGATGTCTGACATAACA
TTGAACCGTTCcataaaaaaccatacagggggtggacgaaccttttcaag
tcaaaaagattttgttgaaaatgtgtggataacccctggaaaatggcaaa
ctTTGCAAAGTACtttttttCGTACCTTAAAGCGagggacgaactaaaat
cagtcttttaacccctggaaattttagaataactttttacccccttagaa
aattgaaaaacttggaaattggaaatttttctcacaTTATCCTCTGGAAA
TgctcgtccaccccctgtataaAATGGAATGACGTATTTTTAGAAGGAAA
ATACAATTATTCTTTTCTTATCAGAGTTGCCTAGTTTTCGAAATTCTATG
TTTTGAACTCGAGCCTATctgatttttctttcagaaaggTAAATTATGAA
GACCTGTGtttttttCTCTCTCCGAGGTTTTGAAAGGATATCCGTTTGAC
CAGGAGATTTCTATTTCTATGAATGAAAATCCTCATTTAACATGTTTCGT
TTCATTTTTATAACACTTGATTCTGTTTTATTATGCTTCGACatttttcg
aattatttttttcacacGAAACATGTTTTATATCTTGTTTTTATATCAAA
GTATATATTTTGTAGATTTAAGCAGATTTAAAGACGAGGAAATATCTAGA
CGTAACAAGAAAACCA Coding sequence (CDS) from alignment at sc0000156_pilon:28426..31791+ >MSTRG.16467.1.p1 ID=MSTRG.16467.1.p1|Name=MSTRG.16467.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000156_pilon:28426..31791+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAGTCGTTTGGGAAAAAGAAACTAGCCTGTAAAGATTTGTATGG
CTACCTATTGACATTGTCATCTGAAGTTCTCAATGGTCTTTATGACCACC
CATTCACTTGTCTAGCTGTCTTCCGTGGTTTACCTGAGATtggaaaacat
tacgtcatgagaACATTGTTCACAGACCAAGCTTTCCCAGAGCACGTCAT
TTTATCTTGGTGCAAGAAAGAGCATCGTAATGACCACAAAGTAGCCGTCG
ATCGATTATGTGGATTACAAATTTGGAACAGGGTTACGTCGCCTTCCGTA
CATTTtgaaatgaacaaatttttccagCAAAACCTTCGAATAGGTGTTCG
CGGTGGAGGGAAAATTGAAGAAGAGCCGCTTAAAGCAGTGGAAGAGAGAC
ATGCTCGAGATGTAACTTATTTAGATAATTATGCCAAAGAGCGATGGGAG
TGCATATTACAATACATGACTGGCTCACAACAAGGAATGAATAATGTAGG
AGTGAGTCCTGATGTTGCAAAAGTTTTGATTTCGTCGGGTTTGTTAACgt
taaatgaaagtgaaaataacACTTCGATTACTTCCGCTGGCTTTCAGTTT
TTGTTACTCGATACTTCTTCCCAAGTCTGGTATTTCATGGTCCAGCATTT
GAATTCTAAAGACAAAGCCGTTTTAGTGCAATGTTTAtcgtttttatttc
aaactggATTCTCTGTACTTGGTAAAGACTACCCGGTCAAAAATTTGACA
GCAGAACAGTTCAATTTTTTACAATTGCTTCGTGAAGTTGGATTAGCGCA
TCAACGGAAGCGTACATCAAAAAGGTATTACCCGACTCGATTAGCCATTA
ACCTGGGCACTGCTGTGACTGGCAGTACCAACACAATATCACAAGGACAA
TCTTATTTAGTAGTAGAGACAAATTATCGTGTTTACGCGTACACCGAATC
TGCTCTTCAAGTGTCATTGCTTAGTTTGTTCACAGACATCAAGTCACGTT
TTCCAGACTTCACTGTCGGTACGTTGAGTCGTGAAAGCGTGCAACAGGCC
TTAGCATGCGGTATATCAGCTTCACAGATCATTGATTTTCTGAGGACAAG
AGCTCGTCCTCAAATGTTAAGTAGAACACCCATCATCCCTCCCACCATAA
CTGATCAAATAAAGTTGTGGGAGATGGAGAGAGATAGGTTACGTTACACA
GAAGGAGTTTTGTATAATCAATTCCTGGCGCAAAGTGACTTTGAAATGTT
ACGTAGATATGCTGATGAGAATCAACACCTTCTTTGGGCCAACAGTCAGA
AACGTTTGATGGTCGTGTCTAAAGAAGGACACGATGATGTGAAAAGGTAc
tggaagaaaaataaaccatcTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:28426..31791 + |
|
