MSTRG.16087.1.p1 (mRNA) -

Overview
NameMSTRG.16087.1.p1
Unique NameMSTRG.16087.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000148_pilon:794235..795729-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16087.1.p1 ID=MSTRG.16087.1.p1|Name=MSTRG.16087.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1495bp|location=Sequence derived from alignment at sc0000148_pilon:794235..795729- (Clytia hemisphaerica_ch_hm2_pilon)
GCGTGGCATTCGTGGGCTTTGATGAATTATGAGAGTGTTTTGTATTACAA
AAACAGTGATACACCCATTGCACCTCCTACACCAGCCGTTTCCAGTCCTC
CTGGATCACCAAGAAAACCTCAGGTTTGTATCGTGCCATTCTTTAAATTT
CCTCGTCATTGCGAGTGTTTAAGCCAGGCTTCAATAAGGAAATCCTGCCT
CAAAATTAAACAAAATGGAAGGAGTCTGGAGAATTTAGTTGTATAGAATC
GATATTATGTCTGAAGTTTACATTCGGTTTTGAAACACCAACAAATTCGC
ATTGATTTTATTCGGACTCTTTAGTTTGTCAAGCATTGTAGACAGTTTTC
TAAATCAAAGAAGAAAGAAACATTCTGGCTGAGATTGTTATCATATTTCA
AAGGACATTTTCTCCTTCAAAAATTACCTTCACTGCTATTCAATTTATTG
TTTTTTTTGGTACGTCCGAACAGTAACTTTGTTTTGTTTTATTGTAGCCG
TTGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAAAGGTTTCTT
CCATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACACTCTGAGGT
CAGTTCACTGTTTGGAATTATTTCATCATAACAACAGGAATTCTTTAGGA
CCGAATAATTGATAATATTTGTTGACGATTCAAAATTGACAGAAATTGTA
AATATATAGCGTAATGTTAATGGTTTCCCACTTCGCCGTAATGAGTCAAA
CTGTACCACGAACTTTTGGAAGTACCAAGAATTCTCTAGGACTTAATAAT
TAATACTACTTGTTAACGATTTAAAAATATTGACAGAGATTGGAAACTTA
ATATAGCGTAATGGTTTCCCATTTCGCCGTCATGAGTCAAACTTAGTCTT
TGTACCACGAACTTTTGGAAGTACCATTGGCATTAGAAGTAAGTCATTAA
TTTTTAAAGTAATCTCATTATAATAGCCTAAACTACCTTTTTCTGTTCGT
CCTATAGATTGTTGACGTTGTGGTTCGATTTTGGACATTACGATGACGTG
CACAAAGCACTTGTGGATGGATTAAAAACCATTCATATTGATAACTGGCT
TCAGGTATGTTTTAGTGTAATTGAGCTTTAAGTGGTTCGATTTCATTGTC
TTTCAAAATTCACCTAGTGGTTTATATGTTAAATGCTCCTCTCCATCGGG
ATGGAGGCTTAGGCCACCTTACCCCAATCTCTAACTCGGATACGAATTTA
TTACTTGAAAGTTTTTCATCACTCGAACACCTTTTATTTAATAAAACTTG
ATAAAGACGGGTCAAAACGTCGTATTACACAACTGTGTTTTACTGGTCTA
CTATGCGTATAGATTGACTTTATTTTTATTTAATTTGAACGCAGGTGATC
CCGCAGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGGTCGACT
GATCCATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGGT

Coding sequence (CDS) from alignment at sc0000148_pilon:794235..795729-

>MSTRG.16087.1.p1 ID=MSTRG.16087.1.p1|Name=MSTRG.16087.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1680bp|location=Sequence derived from alignment at sc0000148_pilon:794235..795729- (Clytia hemisphaerica_ch_hm2_pilon)
GTGATCCCGCAGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGG
TCGACTGATCCATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGA
TTGTTGACGTTGTGGTTCGATTTTGGACATTACGATGACGTGCACAAAGC
ACTTGTGGATGGATTAAAAACCATTCATATTGATAACTGGCTTCAGCCGT
TGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAAAGGTTTCTTC
CATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACACTCTGAGGCG
TGGCATTCGTGGGCTTTGATGAATTATGAGAGTGTTTTGTATTACAAAAA
CAGTGATACACCCATTGCACCTCCTACACCAGCCGTTTCCAGTCCTCCTG
GATCACCAAGAAAACCTCAGGTGATCCCGCAGTTGATAGCGCGTATCGAT
ACACCACGACAAATGGTTGGTCGACTGATCCATCAACTCTTATCCGACGT
CGGAAAGCAACATCCTCAGATTGTTGACGTTGTGGTTCGATTTTGGACAT
TACGATGACGTGCACAAAGCACTTGTGGATGGATTAAAAACCATTCATAT
TGATAACTGGCTTCAGCCGTTGGATGCGACGGTGCATAATTATACAGTAC
CTGCTGTCAAAGGTTTCTTCCATTCCATTTCCTTGTCACGTGGTAATTCG
CTCCAAGACACTCTGAGGCGTGGCATTCGTGGGCTTTGATGAATTATGAG
AGTGTTTTGTATTACAAAAACAGTGATACACCCATTGCACCTCCTACACC
AGCCGTTTCCAGTCCTCCTGGATCACCAAGAAAACCTCAGGTGATCCCGC
AGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGGTCGACTGATC
CATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGATTGTTGACGT
TGTGGTTCGATTTTGGACATTACGATGACGTGCACAAAGCACTTGTGGAT
GGATTAAAAACCATTCATATTGATAACTGGCTTCAGCCGTTGGATGCGAC
GGTGCATAATTATACAGTACCTGCTGTCAAAGGTTTCTTCCATTCCATTT
CCTTGTCACGTGGTAATTCGCTCCAAGACACTCTGAGGCGTGGCATTCGT
GGGCTTTGATGAATTATGAGAGTGTTTTGTATTACAAAAACAGTGATACA
CCCATTGCACCTCCTACACCAGCCGTTTCCAGTCCTCCTGGATCACCAAG
AAAACCTCAGGTGATCCCGCAGTTGATAGCGCGTATCGATACACCACGAC
AAATGGTTGGTCGACTGATCCATCAACTCTTATCCGACGTCGGAAAGCAA
CATCCTCAGATTGTTGACGTTGTGGTTCGATTTTGGACATTACGATGACG
TGCACAAAGCACTTGTGGATGGATTAAAAACCATTCATATTGATAACTGG
CTTCAGCCGTTGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAA
AGGTTTCTTCCATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACA
CTCTGAGGCGTGGCATTCGTGGGCTTTGATGAATTATGAGAGTGTTTTGT
ATTACAAAAACAGTGATACACCCATTGCACCTCCTACACCAGCCGTTTCC
AGTCCTCCTGGATCACCAAGAAAACCTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16087MSTRG.16087Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16087.1.p1.exon4MSTRG.16087.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16087.1.p1.exon3MSTRG.16087.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16087.1.p1.exon2MSTRG.16087.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16087.1.p1.exon1MSTRG.16087.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16087.1.p1MSTRG.16087.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000148_pilongenomesc0000148_pilon:794235..795729 -