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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000148_pilon:754840..759930- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16082.1.p1 ID=MSTRG.16082.1.p1|Name=MSTRG.16082.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5091bp|location=Sequence derived from alignment at sc0000148_pilon:754840..759930- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAGAAACCTCAATTTAAAATCTATCGAGAAATTGCAATACAAGTTG
CAATACTACAACCTGTATTTAGGGAAGTAGAAAAATATTTCAGTCAAGGA
ACGCTCTGTAAGAAGGCATTAGGAAGATGAACCTTCGCCTATTGATTTTG
GTGGGACTTGCGTTCACTCAAGGTAAGGTCTCCAATAAAATAAATCATCA
CTTCGTTTTTGTTGTTTGTTGTATCGTTTGATCATAGTATACTATGGTTT
TATCGATAGTTACAGGCTCAACATCGTGGCCTTTCATTTGCATGTCACTG
TGTCCACACTTTGTTATATATCCGTTTTTGACGAAGTAACGCTTGGCCAA
TTCATGGCCATCCAATGGAAGAAACGGCGCCTTGTAAAAATCGCTTGTAT
TTCATAACGCTTCGGCTTTGTACTAGCGAGGCTAAGCAAGTGTTCATTTA
GACTGTTCAATGCGATATCGTAGGCCTGTACATAAGATTTCATATGCATG
GTTTGCTTTGGCAAGTTATGTACAGGCCTACGGTATCGCACTTTACGGTC
AAAATAAACCCGTGCTTAACCTCGCTACTATTTTAAAGTCTATCGATAAA
TCATATACGGATTGTCAAGAGAAAGTTTTATTCATCGTGGTCAATTTATA
TTAATTCAGGATATTTCTAACACGTGCATATTTTCGATGTCAAGCTAGAA
AAAATGACAAGCAGTTTTTGCAGTTTCTGAAGGTGTATTTTTTTGGTTTA
TCCCAGATAAGATATAACATCAACATAAATAGTGTAGTAATAGAGGATAA
AAAGAAAAACCTTCTAATTTGAGCTGTTGTTTCTCTTACCCAAGCTTTAC
TTTTTTGGGCTATCTATTAATTTAATCTTTCGATCCTCTCCAATTGTGGT
ACCCGGGAGGGGATTTTCCTGTTGTGGTATCTGTCCACAGATTTTGAAGC
CTTTTGATGTCATAACTTTTCGAGATCTAGGCCCATAAGTGTGTTTTTGA
AACTTTCTTATTTCACCGCATTATGTGATTATTTTTAGATTCCAAAAAGC
CTTAAATTGTTCTTAATAGTAGGGGGCCAAGCCTTTTGTGTTTGAGTCAG
AGAGTTCCTGTAATACATTTTTTACTCAGAATTTCATGCTATTTCAGATG
GTACCAATCATTTTCGTTTATTTTGACTTTTGAAAATCAGCTACTTTCCT
ACCCCTCATTGTCCCTTGTAGTTTTAGCTATGGCGTCACTATTTTGGTCA
TAAAACGTTTTCCCGGGCCTAATCCGCGTCCTCTCTCTCAAAAATATCTT
ATAATATACTGCTCTTTGGAATAGGCTAAAAATTGCTAGGTCGTAAAAAA
GATAAGGGACCCCAGGCTTGGCCCCTACGATAATGTGTTTTTAAAATTTA
TGTTATTATATATAGTTTGCTCTTATTAAAAACTGTGTTGAAAATTTCTC
ATAAACAGGCAAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTTTTC
CTCATGATGAAAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCACGAT
GAAAAAACGCCACAACCACAATGGCCGCCCATAAGCTCCAACAGATGCTC
ACAATCAACTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAACAT
CTCTCAAAAAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAAC
GCTCTGGAATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGTTTA
TATAGCGTACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAA
TACAAATTCATGCTGATGGAGGTTTGTTTGAGTTGTTTGTGATCTAACTC
ATACAGTTGTTATTCTCTAATACGACGTCCTATTATTCGATACACTCCTA
TCCTATGATATTGAAAGTCACCGTCAACAAGAAACTCTAATAAACGACGC
TCTACTATTCAATACGCTCCCCATTTTGATAAAGATCCAAGCCCCCCTTG
AAAATCGGATTATGGACAGTCAACTGTATTGTCAATGGTGTAAATCAATG
TGGAACCTTTTCCCACTAGGACGATTAGCCCAAAATAGTCATTCTCGGTG
AAATAAACTATTCTGTATTTTACATAATCGAATTCAGAAATCAAACTAAT
TGAAAGGAAGTTGAAGTATTTTCGAAAACTAACAGCTAAAATGGCTTCAC
ATTTTTGAAAAAATACGATTGCTTATGTTTAATGCAATTAAAATCAATAT
AACACCAGTCACCTACCAGTTTAATGGTATTTCCAGAGAAAAGCCCTTGG
AAATTACAAAAGATTTTCTCACAACACTTTTGACCCATCAACCAATGAGC
TTCATTTAGACCCTGGGAAGCAGTTTCTCAATACCGGACAAGCAAGATAT
TTTGATCGAAGTTTTTTTGAAAGTGGTACCCGAATCGAGAGCGATCTACT
TGTGCAGTAAAGATGTAGCGCCGTTTGTCGTTAGGCAAGATTTTAAAACT
ATAATGTCTTCATTGTGGGTACCCCTCTCAAAAAACGATCAAAAATGGCG
GATAAGGCTTGGTCTAGGTTTTATTAAGGTCAGTGCCATCAACCCCAAAA
TGTTTTAATTTTAGGCCAATTCATTTTCTCCGTCTGGGATGCAGATCGGA
CAAACAAAGCAGACGGTATCAAACACGTTAAAAAATCATCAAAACTAGCA
TGGCCGATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGTGGTGT
ACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACAAAGT
GCACCAAAAACCATCCATCGATGAAGGTAACACCTTTTTGTATTTTTCCG
TACACCCTTTTCTCAAAGACCCGTTAGAATTTTTTCAGCCAACCATAACG
AACGGAAGGTCTGTGATATTCCCATGGTTTCATGGTTGGGGATTTAAATT
CCATTTTGTTTTCAAGTCAGAAAATTTAGTGGAGATAATTCATTATTTTC
AGTGGGTACACAATCTGGAGTAGAATTTTCCACTGGGGACGATATTTTGG
GCAATTTTTCCCGTGGGAAGGGGTCCCAGTGGGTCTGTGAGAAGGGGATG
TTTCGATCTAGAGTGATAGTCAAGTGGTGAAAGGCGTCAGTCTCTCAAGC
CAGAATTTCGCTCCTTGAATTCCCGCTCCTTCTAATGTGCCATTCAATAG
AGTAATGTATAGGGATAAAAATAGAGAGTGCGAGAATGTGAAAAATATGT
CGTTCTTTGTCGTTCTTTTTTTCGTTTTTTTAATAGTTATTGTCGTTCTT
TTTGATGGTCTGGAAACGTTAGATGAACAGTCTCACATTTCTCGAAAGCG
TGCTTCGAGAATAGTAACTGCTATAGGTTTGGTTTATCAACATGAAACAT
TAAACCTTTTAGGAGAGGGATAGTAAATCTAAGTCTTTGGGGTTTACAGA
TGTAGTCTACAGCCCACCAAGATACAGTCATTATTTATTCACACCAATAC
CCTCATTAGGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCAGA
TCAAGATACTATCAACACCGCTGATTTCGAAGGTTTCAAAAAAGTCCATC
AAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGTAAAATAAAACTG
AAATATTTTCTCGAAAATACTATCAGTTAATACTGAGAGAAAGCCAATCC
TATGCTCCTAAAATAGCTCCCTCCCTTATTAAATCTTGTAGTATATACCA
GTCTAAATATGATTCCCCCGAGGCAGCAGATCGGACAGAATTTACCTACC
CTAAATTGACGTGAAAGTTGGTACGTTTTGAAGAAGTGTCCAAAACAGGT
CGGAAATGCAATATTAGCATATTTATAACATACGTACTTACTAATCATAC
ATTATTTTAACCAAAGTAAATATTAATGAGAATATCAATTAGGGGGAATT
GTAGGCTGCAAGCAACCTCTCTGATATGTTTTGATATTGGGGATGCTAAT
CGTGTATAAAATCCCCTTCCGAACAGTAACCCAAATTTTGGGTAACCTGT
TTCAACTTTCTTAAAATTGTTGAGAAACCCAATGATTATATTAACATCTA
GTCATTCCAATTTTTAATTCAAATTTAATGAAATTTAAATATATTTCATA
TAAGACTTACAAGTCAAGCTTATGAAGAAACTCAAAAAAACAAAGACGGG
GGTAACTCTCGGACGGGAATTTTATACACGAAACGCATCCCGTATATCAA
ACCATATCAGGGGGATACTTACAGTCTAGGGAATCTAGGGAGCAGACTAG
GAATAAATATAACAAATCTTTAAACAGTTAAATCAAGAAAATTGTTCCTA
TAGGATCTGTATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAA
GGTTCCGAAATCCCAATCGGAACAATCATGTTCGAATCGGCTGAAATCGG
ATTCAACCGTCTTGGGACATTTGACGAAATGATTGGCTGTAACAAATGTA
ACGCTATCTATCACAAGGACACTCGATATGGACCCAAGATCGGCGGGGAC
GACAGAAGTGTCCGTAAACCTACAAAGATGTATGGCGACACGAAATATTA
CAAATCTTCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGATGAGACGA
GTATCTCATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAA
ACACAAATTTGGTAACTGTTGTATACAACATATAGATTACATCGGTTTGT
ATATTTGCAAGTATAGTTGACTTTTAAGAGTCTTAATAAAAATCTTAACT
GAAAATCTTGCGAGTTGTATATTTAAGAGCTTATTTTACCTTTTTCTTGA
ACACTTAACCTTAACATTTTCGTGTTCAATACAAAGCACGTAATTTTTTC
ATATTGTAATTGGATAGGACCATTTTATTTTATATCCATACAGGGCTTGG
ACGATTTCCACGAGGTAATCCGAAGAAGTATTTCCAGGGGTCTAAGGAAA
GTCTTTTCAATTTTAAAGGGGGTTAAAAATTAGTCTAAAACTTCCTGAGT
GTTATCAGTGCCGTAGACACAAATAATATTTTAGAGGGGCC Coding sequence (CDS) from alignment at sc0000148_pilon:754840..759930- >MSTRG.16082.1.p1 ID=MSTRG.16082.1.p1|Name=MSTRG.16082.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5550bp|location=Sequence derived from alignment at sc0000148_pilon:754840..759930- (Clytia hemisphaerica_ch_hm2_pilon)
GATCTGTATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGT
TCCGAAATCCCAATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATT
CAACCGTCTTGGGACATTTGACGAAATGATTGGCTGTAACAAATGTAACG
CTATCTATCACAAGGACACTCGATATGGACCCAAGATCGGCGGGGACGAC
AGAAGTGTCCGTAAACCTACAAAGATGTATGGCGACACGAAATATTACAA
ATCTTCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTA
TCTCATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACA
CAAATTTGGTAAGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACC
AGATCAAGATACTATCAACACCGCTGATTTCGAAGGTTTCAAAAAAGTCC
ATCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGCCAATTCATT
TTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACGGTATCAAACA
CGTTAAAAAATCATCAAAACTAGCATGGCCGATGGATACGGAAAATTGTA
AACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGAGATTGGTAAA
AAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATCCATCGATGAA
GGCAAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTCATGA
TGAAAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCACGATGAAAAAA
CGCCACAACCACAATGGCCGCCCATAAGCTCCAACAGATGCTCACAATCA
ACTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAACATCTCTCAA
AAAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAACGCTCTGG
AATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGTTTATATAGCG
TACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAATACAAAT
TCATGCTGATGGAGATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCG
TTCACTCAAGGATCTGTATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGA
AAACCAAGGTTCCGAAATCCCAATCGGAACAATCATGTTCGAATCGGCTG
AAATCGGATTCAACCGTCTTGGGACATTTGACGAAATGATTGGCTGTAAC
AAATGTAACGCTATCTATCACAAGGACACTCGATATGGACCCAAGATCGG
CGGGGACGACAGAAGTGTCCGTAAACCTACAAAGATGTATGGCGACACGA
AATATTACAAATCTTCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGAT
GAGACGAGTATCTCATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAA
GACCAAAACACAAATTTGGTAAGCTGGTGATCGATACAAGGTCAAATTGG
AGTGTGTACCAGATCAAGATACTATCAACACCGCTGATTTCGAAGGTTTC
AAAAAAGTCCATCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGG
CCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACG
GTATCAAACACGTTAAAAAATCATCAAAACTAGCATGGCCGATGGATACG
GAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGA
GATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATC
CATCGATGAAGGCAAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTT
TTCCTCATGATGAAAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCAC
GATGAAAAAACGCCACAACCACAATGGCCGCCCATAAGCTCCAACAGATG
CTCACAATCAACTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAA
CATCTCTCAAAAAGAAACCGATGACATCATTTGAAATTGATATTGAATGG
AACGCTCTGGAATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGT
TTATATAGCGTACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTG
GAATACAAATTCATGCTGATGGAGATGAACCTTCGCCTATTGATTTTGGT
GGGACTTGCGTTCACTCAAGGATCTGTATGGGAAGTCAAAGTTATTGTCG
TAAAAGGTGAAAACCAAGGTTCCGAAATCCCAATCGGAACAATCATGTTC
GAATCGGCTGAAATCGGATTCAACCGTCTTGGGACATTTGACGAAATGAT
TGGCTGTAACAAATGTAACGCTATCTATCACAAGGACACTCGATATGGAC
CCAAGATCGGCGGGGACGACAGAAGTGTCCGTAAACCTACAAAGATGTAT
GGCGACACGAAATATTACAAATCTTCTTGCAAAAAGTATTTTATTTCTGG
CTCAAAAGATGAGACGAGTATCTCATTTGAGAGTGGCCCTCTAACTGAAG
GAGTTACAAAGACCAAAACACAAATTTGGTAAGCTGGTGATCGATACAAG
GTCAAATTGGAGTGTGTACCAGATCAAGATACTATCAACACCGCTGATTT
CGAAGGTTTCAAAAAAGTCCATCAAGACGTTTTGGGAGAAGTTGATCGTG
ACGTCACAGGCCAATTCATTTTCTCCGTCTGGGATGCAGATCGGACAAAC
AAAGCAGACGGTATCAAACACGTTAAAAAATCATCAAAACTAGCATGGCC
GATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGTGGTGTACCCT
ACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACC
AAAAACCATCCATCGATGAAGGCAAGGATTTGTTTGACTTGGACGGTGTT
GACGAACTTTTTCCTCATGATGAAAAAGTAGAGGGCGGTGGGGATGAAAT
ATTTCTCCACGATGAAAAAACGCCACAACCACAATGGCCGCCCATAAGCT
CCAACAGATGCTCACAATCAACTAAACTTAAAGTCATGTACGGAATCTTG
CATTTTGAAACATCTCTCAAAAAGAAACCGATGACATCATTTGAAATTGA
TATTGAATGGAACGCTCTGGAATTTCATCTGACTGAAAATACGAAGAAAC
ATGGAGGAGTTTATATAGCGTACACTTTCGGTATGAAAAACGGACCCGGA
GGATATTTTGGAATACAAATTCATGCTGATGGAGATGAACCTTCGCCTAT
TGATTTTGGTGGGACTTGCGTTCACTCAAGGATCTGTATGGGAAGTCAAA
GTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCAATCGGAAC
AATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGGGACATTTG
ACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCACAAGGACACT
CGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGTAAACCTAC
AAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGCAAAAAGTATT
TTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGAGTGGCCCT
CTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAAGCTGGTGA
TCGATACAAGGTCAAATTGGAGTGTGTACCAGATCAAGATACTATCAACA
CCGCTGATTTCGAAGGTTTCAAAAAAGTCCATCAAGACGTTTTGGGAGAA
GTTGATCGTGACGTCACAGGCCAATTCATTTTCTCCGTCTGGGATGCAGA
TCGGACAAACAAAGCAGACGGTATCAAACACGTTAAAAAATCATCAAAAC
TAGCATGGCCGATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGT
GGTGTACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTAC
AAAGTGCACCAAAAACCATCCATCGATGAAGGCAAGGATTTGTTTGACTT
GGACGGTGTTGACGAACTTTTTCCTCATGATGAAAAAGTAGAGGGCGGTG
GGGATGAAATATTTCTCCACGATGAAAAAACGCCACAACCACAATGGCCG
CCCATAAGCTCCAACAGATGCTCACAATCAACTAAACTTAAAGTCATGTA
CGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGACATCAT
TTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTGAAAAT
ACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATGAAAAA
CGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGATGAAC
CTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGGATCTGTATG
GGAAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCC
CAATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTT
GGGACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTATCTATCA
CAAGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCC
GTAAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCTTCTTGC
AAAAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGA
GAGTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGT
AAGCTGGTGATCGATACAAGGTCAAATTGGAGTGTGTACCAGATCAAGAT
ACTATCAACACCGCTGATTTCGAAGGTTTCAAAAAAGTCCATCAAGACGT
TTTGGGAGAAGTTGATCGTGACGTCACAGGCCAATTCATTTTCTCCGTCT
GGGATGCAGATCGGACAAACAAAGCAGACGGTATCAAACACGTTAAAAAA
TCATCAAAACTAGCATGGCCGATGGATACGGAAAATTGTAAACGGAATTG
CCAAGATTGTGGTGTACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCA
CTACTGGTACAAAGTGCACCAAAAACCATCCATCGATGAAGGCAAGGATT
TGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTCATGATGAAAAAGTA
GAGGGCGGTGGGGATGAAATATTTCTCCACGATGAAAAAACGCCACAACC
ACAATGGCCGCCCATAAGCTCCAACAGATGCTCACAATCAACTAAACTTA
AAGTCATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCG
ATGACATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCT
GACTGAAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCG
GTATGAAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGAT
GGAGATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000148_pilon | genome | sc0000148_pilon:754840..759930 - |
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