MSTRG.16081.1.p1 (mRNA) -

Overview
NameMSTRG.16081.1.p1
Unique NameMSTRG.16081.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000148_pilon:750758..752856-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16081.1.p1 ID=MSTRG.16081.1.p1|Name=MSTRG.16081.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2099bp|location=Sequence derived from alignment at sc0000148_pilon:750758..752856- (Clytia hemisphaerica_ch_hm2_pilon)
TGATTGGTAGTGATTGGCGTTAACTCAAAAATTTACAAGGCATGAAGCTT TACTTCTTGATATTTACTGCAGTTGTTTTAGTTTACGGTAAGTTTGAAAT CCCAACCCGTTTCAATCTTTTGTCAAGTTATCAAGATTTTGATTTTGGCG TCCCCTAAGAAAATCAAATGTTTTTGGAAAAGTTATGCTATATCCGAGTT GTAAAAGAGTAAAGGGGCGCTGAAATTAGAAATGAAAGGCATCTTTTTGC GCCCGTTGTATTTCGGCGCCCCGAAAAAATCCGACTGCTGGAGCCCCTGC CACCACGCTATTGCTGGTGATCAAACAGCAAACAGAGTGATTCCCCAATC CATGCATATATAAATTAGTACTGTATTGGAGTTCGTGAAAATTATCAAAA GACTACATTAAAAGCTCATTTAGGCGAGAAATATTTTTGGCAAATTTGGT GAGTTTAGACAAGATTCGCCAGAATAAGTTCTCATCAAAGTTAAATACTT TGGCCCATTCAATTCACCAAAATGAGTTCTTGCCACAATTGAATGCTTTT GTATTTCGCAAAAACATCCCCAATTTCATCTAAAATTGCTGAAAAAAAGG CAAAATAGACCAGATTCAGTCATTTGTTAAAATTAGTTCTCGCAAAAACC AATAAATCTGACCATATTCACCAAAATAAGTTCTCAAGATTTATGCTGCT CACCAAAATTAGTTTTCGTCAAAATTAGCTCCTTAATGTACTATCTAATG TGTACTATCCATAAAAAAGTATCGGGGTATGTAAAATGAACTAAAATTTC AGTCGAATCACCCTTTTAAACCTTCGAAACTGAATTTAAGCTAAGGAGAT GTGTTCTAAGGTATATATTTCAAACCGTCGTTTTTACAATTCAGAAGGAA GTTTTTTATATACAACAACAAAATAAGTAAGTGTGCGACCCAAGGCTCCT CTTTTGATAATGATTACCTGGAGGTAGGGAAAGGCGCTACTCTTTCTCCC TAGATTGCTCCACTTACGATTGATCCTTCTCTTAAATTGCTGAGCATCAA AGCAGAAAGAATTTCAGTAATTTTTTATACTAAAGCGAAGTCTTCGGTAT AATAGTCTAAGACGAGTTTCATCTAAAAGGAACAAATGTGAAGACGGAAA TTTTTTACGGGAGTGGCTGTTGTCTTAAACACAGACTCTATCCGCCGCGA AACATATTACGTTTTATAATATACAAACTATGTTATATCATAAAAAATAT TATACGGACGATAGCATCGACTACATAGACGGATGATCTAACTCTGCACT ACGGTCGCTACCAACAGAAAAAGTACAGTCGACTATCGCTAATTCGAACA CAAATGGGCAATTTTATTTGTTAGAATTACAGAGAGATTCGAATTATAGA ATGCATTTCAAGAGGGGTTCTCCTTGAAGGGGAGTGGAAACAACTTCGAA ATATAGCAAGACTTGAATAATTTAAGTTCAAATAAGCGAGAGTTAACTGT AGTACTATTTACATATCTTAAGGCCAGTCTCCACTTGTGCGCGCCGCGAT CGCACTTTTTTAGTAGATCTACCACGCTATTGGTCAAAAGAAAAATGAAG CAATTCCATTGGCGCGATCTGACGTAACTTTTGAAAAATTTGGAAATGTG TTCAACTTTTTTTTTGCGCGCGCGCTACATTTTTAAGCAAAAAGGATTGA AGCCAAATAGTGCGATTGCAGCGCCCGCGGGTAGAAACCGGCTTTTAGAT TAATCTAATCCTATTTATTTCAGCTAACGAATGGCCACCTGTCAGCGAGG AAGAATGTTCGACAGATACCAAACAAAAAGCTATGCATGGAAAAATGACC TTTGACCCTCCACTTAGTGAGTCCCCAATGACGTCATTTGAAGTTGACGT CGAATGGAATGATTTGAAGTTTCACTCAACGGAGAATATGGAGATGAAAG GAGGCATGAACGTGGTGTACACTTTGGGAATGAAAAATGGCCCTGAAGGA CGTTTTGGGATTGAATTATCACACTCTGGAGGTATGATTTTGAATTCTAA CATCATGTTAAAAAGATATGATAGCAACCTGACTGAACGGCGATTTAGC

Coding sequence (CDS) from alignment at sc0000148_pilon:750758..752856-

>MSTRG.16081.1.p1 ID=MSTRG.16081.1.p1|Name=MSTRG.16081.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=744bp|location=Sequence derived from alignment at sc0000148_pilon:750758..752856- (Clytia hemisphaerica_ch_hm2_pilon)
CTAACGAATGGCCACCTGTCAGCGAGGAAGAATGTTCGACAGATACCAAA
CAAAAAGCTATGCATGGAAAAATGACCTTTGACCCTCCACTTAGTGAGTC
CCCAATGACGTCATTTGAAGTTGACGTCGAATGGAATGATTTGAAGTTTC
ACTCAACGGAGAATATGGAGATGAAAGGAGGCATGAACGTGGTGTACACT
TTGGGAATGAAAAATGGCCCTGAAGGACGTTTTGGGATTGAATTATCACA
CTCTGGAGGTATGATTTTGAATTCTAACATCATGTTAAAAAGATATGATA
GCAACCTGACTGAACGGCGATTTAGCATGAAGCTTTACTTCTTGATATTT
ACTGCAGTTGTTTTAGTTTACGCTAACGAATGGCCACCTGTCAGCGAGGA
AGAATGTTCGACAGATACCAAACAAAAAGCTATGCATGGAAAAATGACCT
TTGACCCTCCACTTAGTGAGTCCCCAATGACGTCATTTGAAGTTGACGTC
GAATGGAATGATTTGAAGTTTCACTCAACGGAGAATATGGAGATGAAAGG
AGGCATGAACGTGGTGTACACTTTGGGAATGAAAAATGGCCCTGAAGGAC
GTTTTGGGATTGAATTATCACACTCTGGAGGTATGATTTTGAATTCTAAC
ATCATGTTAAAAAGATATGATAGCAACCTGACTGAACGGCGATTTAGCAT
GAAGCTTTACTTCTTGATATTTACTGCAGTTGTTTTAGTTTACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16081MSTRG.16081Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16081.1.p1.exon2MSTRG.16081.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16081.1.p1.exon1MSTRG.16081.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16081.1.p1MSTRG.16081.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000148_pilongenomesc0000148_pilon:750758..752856 -