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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000148_pilon:723204..725827- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16080.1.p1 ID=MSTRG.16080.1.p1|Name=MSTRG.16080.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2624bp|location=Sequence derived from alignment at sc0000148_pilon:723204..725827- (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTGCTTATATAAAAAATGTGCTAATGATATCGTTTAATTTCCTTTGT
AGCTCAGAAATCATCCATAGCCCAAAGATGGCCACCTCTCAGTAAAGCCA
GATGTTCTCAAACAACAAAGCTCAAAGCAATGTATGGTAAAATGATGTTC
AACCCTCCTCTTAGTCAAAAACCAATGACGTCATTTGAAGTTGATGTGGA
ATGGAATGATTTGCAATTTCATCCAACCGAGAATAGACATAAGCGTGGAG
GCGTATACGTATCATATACAATGGGTATGAAAAATGGACCGGGCGGATAT
TTTGGCGTTCAAATGGGCGGAACTTATGGTAAGATTTTTGTAATCCATAA
TAAGTGTTTATTAATACCTTACGGGGAACACATTTAGGCGAGAAATAATT
TTAGCGAGCAGCAAATTTTTTATTACTTTGACGGCGCACTTTATTCTTTT
AATTTTGGTGGAAGCTATTTTCGCAATTGGATTGTAGGGTGATTTTATTG
TGAAAAAGAAACTATGTAACTGATTTGAAATCGTGTTGCAGGGTGGTTTG
CATCTAGCAATTAAATTTAATTTAAATCTTTAGGTGGATTTATTTTCTCA
ATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAAACAAGT
CAAGAAATCCACCAAATTGGTTTGTCCCATGGATTTAAGAAACTGCAAGC
GGAACTGTCAAGATTGTGGACTACCTTCATTACGGGATATTGCCAAACGA
GGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAAGGTATT
TGTCCCTCTTCTAAATTAAGATAATCCTATGGATCAGACTCAGGGCCAAC
ATCATGAAATTGTTAGAGCAATGAATATAGAGTCTAAGGAGGCGCAACCA
AAGAATTTTACTTTGCAAAAAAGTGAGGGATAATGCTCCCCTGGCCCGGT
GGACCCTGAGACTAGTGAAGTGGTCTAATTATTGCTTCGCTAAAGCGACA
GTTGCCTAAGGTAGCCTTTGTCATTTGACCCTATATACGGTGAACGGCTT
GTGACCAGAGTCAAGTCAGCCCTTATTATCTGATTTCGGTCGTTAAATAG
GTACGATATACTCAAACTTAATGGGTCAATTGCAGGTCTTCGACAACCAG
GGTGTGCTGCGTCTGGTACACCATCACATGCCGTGGGGTAAGACTTACTA
TAAGTCCTACCTCCGAGGTATTTAGTCCAGCCAAAGTAACTGACACTACA
CTAGTAAGATGGGTTAAAATATTTTGATTAAAATAGAAAGTTGGAAAAAT
CAGTTTGTATATTGGAAAAAATTGCAAAACGTACGTACATTTTCCTGATG
GAACCCCACCCCGCCACCAAGCTTTCGTACGCTTTTCGAAAGATCCCCCC
TCAGGGTGTATGTACTTTTTGAATGGTCCCTAAACACACAGTACTTCTCG
AAGTGACCATGAAACTATTCCCATTCGTACCTTTACTTAAATTTGAGCTT
GTTGATCAAAATTGAGTCTCATCCAGCATCCAACAGCTTGGAGCAATAAA
ACTTTTCAATCATCAACTTTCAGGTTGGTGATCGCTATACAGTCAAGCTA
TCAAAAGCTGTACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTT
TAGAAAAGTTCATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAG
GTTTGTAGTAGTCTAGCCTCGTTCCTGCGTAAAACAGGCTTTTCACGTTA
TTTGTGAAAGCCAGAGCAAGGTCTCTACGAATTTGTTTTCAGCATTTTCA
AGGTTTTCAAGTTTTTGGGTCATTTTAAAGCTGTTTTTCAAGGCTTTTTG
GCAAAAATTTTAGTACTTTTCAAGGTCTCGTAGACACCATGCAGAGATTG
AAATGTAACATTTTATTTTTGGATTAAGTAATCGTACGTGGTCTAAAGCC
GGATGATGACCTTTCCCGGATATAGGTGTGAAAGATATGCAGTATTGAAA
AAATTGTGAAAATTTGCCATGGCAATGGCGTATATTGAAATGTTCACGGT
ATATTTTAGTGTATATACATACAAAAAAGAGAATCGTGGATTAAAGTCGG
CGCGTAAAAGGATGATTATTTTTACATTATGTCATTATTTTTCAGGTTCT
GTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGTAAAAT
TATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATTCAACC
GTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACGCTATT
TATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGGCGGTA
TAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGAATCCA
CATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCCTCTTT
TTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATTAAGCT
TTGGTAAAGTCCTTTTTTGGCGAAAGAAGAAAAGATACTTGTAAAAGCTA
ATGAAGTTAAAGAAATAAATATTTGCCATTTATGAAGTCTAATCGGAAGT
AGCACTGTCTTTTTTTTTCCTTTT Coding sequence (CDS) from alignment at sc0000148_pilon:723204..725827- >MSTRG.16080.1.p1 ID=MSTRG.16080.1.p1|Name=MSTRG.16080.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3600bp|location=Sequence derived from alignment at sc0000148_pilon:723204..725827- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTTTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGTCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGGACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAAAATGATGTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTTTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGTCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGGACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAAAATGATGTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTTTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGTCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGGACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAAAATGATGTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
GTTCTGTCTGGCAAGTTAGTGTCACAATCAAGAAGGGCGCTACACCAGGT
AAAATTATTCCGGTCGGAACAATCATGTTCGAATCGGACGAAATCGGATT
CAACCGTTTTGGAACATTCGACGAAATGATTGGCTGTAACAAGTGTAACG
CTATTTATCACAAAGACACGCGATATGGACCTATAGTTAGCACAGAGGGG
CGGTATAAAAGACGCCCTGTTCACATGGAAGCATGGACACGCTATAACGA
ATCCACATGCAAAAAGTATCAAATTTCCGGATCGAAACGAGACTGTAGCC
TCTTTTTCGAAAGTGGCCCATTGACTAAAGGCGTCACAAAATCAAGAATT
AAGCTTTGGTAAGTTGGTGATCGCTATACAGTCAAGCTATCAAAAGCTGT
ACCGAGAAAACAAATTCACACTTCACAATTTGGTGGTTTTAGAAAAGTTC
ATGAAGAAGTTTTAGGAGAGAAAAACCGTTTCATCAAAGGTGGATTTATT
TTCTCAATTTGGGACGGTGATCGAACATATCGACTTTCAAATGGAAAGAA
ACAAGTCAAGAAATCCACCAAATTGGTTTGTCCCATGGATTTAAGAAACT
GCAAGCGGAACTGTCAAGATTGTGGACTACCTTCATTACGGGATATTGCC
AAACGAGGTTTTACGACTGGTACTAAATGTATAACAAAATATCCAATGAA
GATGTATGGTAAAATGATGTTCAACCCTCCTCTTAGTCAAAAACCAATGA
CGTCATTTGAAGTTGATGTGGAATGGAATGATTTGCAATTTCATCCAACC
GAGAATAGACATAAGCGTGGAGGCGTATACGTATCATATACAATGGGTAT
GAAAAATGGACCGGGCGGATATTTTGGCGTTCAAATGGGCGGAACTTATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000148_pilon | genome | sc0000148_pilon:723204..725827 - |
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