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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000147_pilon:418212..424343- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16007.2.p1 ID=MSTRG.16007.2.p1|Name=MSTRG.16007.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6132bp|location=Sequence derived from alignment at sc0000147_pilon:418212..424343- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAAAATATATATATAATATGTAAGAGAATAGTATCTATCAATGAAAAG
GGATATAGAACACAAATCACATTTCTATCATCAAATAGACATAGCTGTGT
CGTTTAGCAAGACTGTCTCTAATACAGTTAGTTGAAAAAAAGATCTTTGA
TCTTAGTGGAAATTTTTGAATTTGTTTTTTGTGGTTTTATTTGAGTATTT
TTGTTGGTAAGATGAAAGATAAAAGCTTTCTTGCACTTCCACGGGTAAGG
TTCTTGAATTTCTCTCCATGCGTTTCATTTAGGGTTCTCTGTCATTCTAA
GTTTAGCTCTTTCCATTGCCAAGATTCGTAGAAGGCGATTAGTGGAGAGA
GAGTTGACCTCGCTACGTGTTCAATTTTCATTGGATTCTTACCCAAAACC
TTCCGGTCAGTAGACAATCACAATAATCATTTGATCACGTTCTTAATGTC
GGATTTGTATACATTGCTGGGGACAATTTCAATCAATGTAGTTTTTTGGA
CCCAGTATAATTTTCCCGAAAACTTGTTCACTAAACTAAACTAAGCTTGG
GAAAGGTTGAAGATGCAACTCTAGCCGTTTCGGGCTTCAAACTCAATGTT
TGTAATCGGTAACAAATAAAACAAAATTTCGACCCTATGCAACCACTTTC
CCAATTTCTACAGACTTTTGTTTGCATTCTGATTGGATCTTTTCGAAGAT
GCTGTGTTGGTTGAAAAAACTGTGTAAAGAAGATCTCGGGTTGGTTTTGT
ATGTGTATTGAAGTGAAGGGTTGAAAGCGAATCTAGATTTTCTACAAAAC
GGTCAACATTTTACCATCACCCGGCAACGTATTAGCCAAATATTTGAATG
TTGAGAGGTTAAAAAAACTTATGTTATTTGAGAGTGTGTTTGTGATATCA
CCTCACCTAAGAAATGATCGCAATTTTGGTTATAATAAAGCACTGTTGTT
TGCTTTCAAGATCTGAGGACAACATTTGTAGGGAAAATGGTATATTTGTT
AAACATTTTTCATGTCCTTTTTCTATGTTTGTTTCAATTTCGTTTGAAGA
CACTGTAAGTTGCATAGCTAGAAGTGCAATGGAATGAAGGGAAGCGCAAA
CGATGTAGTATATATCCTGCACTGACACAGCTCCATTATTACCTTCTCTC
TATGTACAGGTCGATTTGTAACCATTTTTTCGCTTTCATTATGTACAGGA
GGAGACGCAATCACCTGGTAGTCATCGCTCGTCATCAAGCTCAAGCGAAA
GTCAAATCAAATACGAAAATGATCGATTGAAAAAAGCGCTTGCTCAAAGG
TAACATCTCTTCCCCTTCTTCATAATCGCCGAGCAGAATCTAATACTCTG
CGCATGATACGCATTCACTCTAAAGGCCATGGATCCGTAAGAGAAACTGC
CTAGGTTGGCGAACCGCTTGAATCCTTTTCATACAGTGTTGGGATGAATT
TTTGGATTCTAAAAAGTAGGTGGTGCTGAGCTGATGAGAGATTTCAGGTG
GGGTAATCCTATGCAGGCGAGGATGACCTTTTTCAGGTGTGGGTTTAGAG
GTCTTGTCTACTAATAATAGCTCTGATTTTCTGATTTCATAAGACTTCAG
CCTGAAATTCAAGGGACCAGTAATCAAAATCTTTGAATATAAATAAAGTA
GTTAGTATACCTTAATGTGGAAAATTTGTGAGCCAAGAAGCGATTGAAAA
TATGCGGTGAAATAGAAGAATATCTTTTGTTTTACAGCTCATCGAATGCA
AAGAAGTGGGAAACTGAATTTCAAACATTGAAAAACAATAACGCCCGCTT
GACGGCCGCCCTACAAGAGAGCGCGGTCAACGTGGAGAAATGGAAAGAAC
AACTGAATAATTATAAAGAAGACAACCAAAGACTCAGAAAAAAGGTAAAG
GACGATTGACTTGCCAATCGGTTGGAGGATATTGTACTCAGCTTGGTCAT
TTCTATTTTATGTTAAGAAGTTTAGATAACAGTTTTAACTCAAAAGACAC
ATCATTACATACTGTGTGCCCCTTGTTTTGATGAGAGCCCCATCGCAAAG
GAGGACTGAAGCAAAAATTTTACCTGCTTTTATCTGTGGACTGAGAGATT
TTGGACATGATGAATGGGAGAGCTCGTAGTTTTAATATTTCGGGAGTTTT
TAAGATACAAACTAAACCGAAAATGAAGTTCTTTATGAATCTTGCTCTCC
AATCCTCAAAAGCCAAGTCTTTTCTATTCAGTGTTAAATTTGACTTGATT
TTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAAATTAACCCA
TGTCCGTTCGTTCGTCTGTTCGTTCGTCCGTCCGTCCGTCTGTTACCAGC
TTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATG
CAAAACGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAAT
TTATTTGGGCGAATTTGAGCCAAAAACTACCTAAAATTAGGGTTTTTTAG
ACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGA
TGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAA
TTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTTGGGGAAATTCCCT
TTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTGACTCGTTATTTTT
TTCTGATTTTTTGCACAACGACGCAAAATGGCAATGCCTAAAATGTGTCG
GAGCCTGATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGCAAAAAAC
TGCCTAAAAATAAGGTTTTTTGGACTTTGGTCAAAATCCTGTCATTACTT
TTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGG
CTGAAGTGGTTTTTCCCGGAAAATTCTTGTTCGCCTTTAAAAACGGATTT
TCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTC
TCAAAGTTGACTCATTATTTTTTTGTGATTTTTTGCACAATGATGCAAAA
TGGCAATGCCAAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATATATT
TGGGCAAATTTGGGCCAAAAACTGCCTAAAATAGGGTTTTTTGGACTTTG
TGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGGAGG
GCAAGATTCTCTAAAAAATGGCTGAAGTGGTTTTTCCTGGAAAATTCTTA
TTTGCCTTAAAAGATGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCA
AATATGAAAATATAGCTTTTCTCAATGTTGACTCATAATTTTTTTCTGAT
TTTTTGCACAATGATGCAAAATGGCAATTCCCAAAATGTGAAGGAGGCAG
ATTTTTAAGGAAATTTTTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAA
AGGTTTAAGTGATTTTCGTATTTGGGGAAATTCCTTTATACCATTTTACA
TTATTCAACACACAAGCTTTATTTTTCTATTCTGAATTTTTGTACATATA
TTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCA
TTCAGCATGTTGCTTGTTTTCATTTCAGCTGGCGGCCAGTGCTGGTTCTG
GCGGTGCTAAATCAAATTCGACGGAAGTATCCGATTTAGAAAAACGGGTT
TCGGAATTAGAAAATAAACTAAAACGGAAAGAAGAGGTTTGTCTCTTTTC
CCTTTGATATTCCAGCAAGTTATTTGATTTTAGTTGTAAAGAGTTCAACG
ATTTGCATTCGCATTGTACTTGTTTTTCCCCATAAGTATAACGTTAAGCA
TATACAGGCTCAGTTTTTGGTACCTAAACAATGGCTGACCCTGACTCAAA
TAAAGATTTTTACCTCAAATTTAATTTCCCCTAAGCATTAACGTGTATTT
GCCACGCCTGAGTTTCGTAATTAATTCGTTTGTACTTTTTCACGCGTAGC
GTCAAAAATATTTATTTATTGCCATGCGTAGACACTTGCTTATTTAAAAA
AAACATGCTCTCTCAAGTTCTTTAACGGTTTAAAATCATTTTCATCTCAA
CCGGTGTGACCGAACTGACTGAGTGGCGTTGTGCCGAAATACTTGACAAA
ACGCCGTGACAAAAGCGGAAACCATCGTGGAGACAGTTTAGTGAGTGTTT
GCTCGTTGGAGGTGTCCGCCTTTCGGATGTTTTACTGTATTTATTTTCTT
CCAATTTTAGGAGTTATCTCGCATAACGCAGCACAGTACGGATGAATTAC
ATGTGTTACGGGAAAAGAATGCGCAGTTATCTAAAAAACTTAAAGTAAGT
GTTTTTTTCTTACATGCTATCTGCGTTATATATCTGGGAATGAAAACGGT
CAGTGGAAATCCGTAACATGATTGGTAGATTAAGTTAATTGGATTTTTTT
GGCGTGGGTTTAATTTGGCGATTGAACAAAATGAGATTTTAGGTGGGAAT
CCAATTTGGCGAATGATCAATTTTCTAGAATTTGGTTGGTATTTCACTAC
TACCAAAATTAATCCAGGGTATATACCAATATGGTATATATAATATATAA
TTTCGAACACACTTATCAATAAAACCAAAGCAATTAAAAGTTAAGAAGTT
TGCAGAAGAAGATACATACGTTAGTCAAGATAACCTCATTTTTCAATGAG
GCCATTATGGAAGCAAACATTCGATTCTGTAAAGACGATCGCTTACGCAA
ATCGAACGTTTACTTCCATAATGGTGGAAGTTATGAGTGATAGTTAAATA
ATCTATAAGGCCTGGCCGTTTGACTGAAGTCCCAAGAAGATGATTGAAAA
CAGTCTGAAAATCCTGGATTACTAGGCTCTCCATGTAAAATATCGAATCT
ATCTGAATTTCAAGGAGATTTGTTTTCACCTTTCAGACACACGAAGATAA
ATTATCAGATGACGTAAACAACAATCGCAAACAAAACGAAGAAATACGAA
ACTACGAAGGCAAATTGAAACAATTCAGCGAAACAAGTCATGAAATGGAG
TCGAAGTTACGAGAACTTTTTACGCTACAACAAAAAATGAATGGTTTGAT
GAAAAGTTGAAATTCTTTGTGAGTTTCTCATTCACTCTCTTTTGTTTACG
TTTCACTTCATGTTGCACATGTGTTCGGCCAGATAATTCATGATATACAT
ATCGTAATGTTTTCTATTATTTTGGCAGTAGTGGCATTTCCGCTACTGGC
CAAAACCGGGGTGGTTCCGTAGAAAGGATTACGTAATGAATATCATTCCC
ATGAATAAGAGAGGACCTGTTTAGCTCCAGTTTTTCTGTTCAATTTTGAA
ATATCTTCTCAAATTTGTCGATTTCAGGCAAATCTTCAGATTATAAAACT
ATGAGGGGACTAGAAACGAAGGTCGCTCGGGCAATCTTTCCAACACACAA
CAGTGTATAAATGAATCTTCTTTTCTTTAAAGAAAGTTCAATTTATCCAC
TTTTTAAGTATGTAATGAAAATATATATTATATAGTATTTTACCATAGTA
GAGTTAGACCAAAAAAATAGTGTACCATAGTCTCAAAAGAAATTGTATAT
AATTAAAATATATTATATCATAAACTCAAAGTGTGTATTATTGTTTTAGT
GTTCTAGCTTTGCCGAGATCAGATAATTTTTGTTTTACATTTAAACTTAG
CAAATTTTAACTTTGTCTGCTAATATCTACGTCATTTTACTTGAACAAGT
TTGTCCTACAATTTTCAAAGCTGTACGAAAATGAATGTAATTTTTCTATA
ATGGACTCTTTGTTGCTTTGTCTTCTGCTGAGATGAAATTTGAAATTTCT
CTAAAATCTCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAATATTC
ATAACGTCCATATAACGTTGAATGAACGTTGAAACAACGTTGTGTGCCAA
CTGGGATAAGAATTTGAAACTTCTACTTTTCATATTCGAGTTGACTCTCC
AGTGCTCTAGTATTTCTTTCTGTTAGGCGAGACCAATTTGATTTGTTGTT
TTACGGGCGCGACCGACCCAGCTATAGCTGCAAACGAAAACATAATAATA
TTGAATTTCCTGTACCACAAATAATGGTCATT Coding sequence (CDS) from alignment at sc0000147_pilon:418212..424343- >MSTRG.16007.2.p1 ID=MSTRG.16007.2.p1|Name=MSTRG.16007.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000147_pilon:418212..424343- (Clytia hemisphaerica_ch_hm2_pilon)
ACACACGAAGATAAATTATCAGATGACGTAAACAACAATCGCAAACAAAA
CGAAGAAATACGAAACTACGAAGGCAAATTGAAACAATTCAGCGAAACAA
GTCATGAAATGGAGTCGAAGTTACGAGAACTTTTTACGCTACAACAAAAA
ATGAATGGTTTGATGAAAAGTTGAGAGTTATCTCGCATAACGCAGCACAG
TACGGATGAATTACATGTGTTACGGGAAAAGAATGCGCAGTTATCTAAAA
AACTTAAACTGGCGGCCAGTGCTGGTTCTGGCGGTGCTAAATCAAATTCG
ACGGAAGTATCCGATTTAGAAAAACGGGTTTCGGAATTAGAAAATAAACT
AAAACGGAAAGAAGAGCTCATCGAATGCAAAGAAGTGGGAAACTGAATTT
CAAACATTGAAAAACAATAACGCCCGCTTGACGGCCGCCCTACAAGAGAG
CGCGGTCAACGTGGAGAAATGGAAAGAACAACTGAATAATTATAAAGAAG
ACAACCAAAGACTCAGAAAAAAGGAGGAGACGCAATCACCTGGTAGTCAT
CGCTCGTCATCAAGCTCAAGCGAAAGTCAAATCAAATACGAAAATGATCG
ATTGAAAAAAGCGCTTGCTCAAAGATGAAAGATAAAAGCTTTCTTGCACT
TCCACGGACACACGAAGATAAATTATCAGATGACGTAAACAACAATCGCA
AACAAAACGAAGAAATACGAAACTACGAAGGCAAATTGAAACAATTCAGC
GAAACAAGTCATGAAATGGAGTCGAAGTTACGAGAACTTTTTACGCTACA
ACAAAAAATGAATGGTTTGATGAAAAGTTGAGAGTTATCTCGCATAACGC
AGCACAGTACGGATGAATTACATGTGTTACGGGAAAAGAATGCGCAGTTA
TCTAAAAAACTTAAACTGGCGGCCAGTGCTGGTTCTGGCGGTGCTAAATC
AAATTCGACGGAAGTATCCGATTTAGAAAAACGGGTTTCGGAATTAGAAA
ATAAACTAAAACGGAAAGAAGAGCTCATCGAATGCAAAGAAGTGGGAAAC
TGAATTTCAAACATTGAAAAACAATAACGCCCGCTTGACGGCCGCCCTAC
AAGAGAGCGCGGTCAACGTGGAGAAATGGAAAGAACAACTGAATAATTAT
AAAGAAGACAACCAAAGACTCAGAAAAAAGGAGGAGACGCAATCACCTGG
TAGTCATCGCTCGTCATCAAGCTCAAGCGAAAGTCAAATCAAATACGAAA
ATGATCGATTGAAAAAAGCGCTTGCTCAAAGATGAAAGATAAAAGCTTTC
TTGCACTTCCACGGACACACGAAGATAAATTATCAGATGACGTAAACAAC
AATCGCAAACAAAACGAAGAAATACGAAACTACGAAGGCAAATTGAAACA
ATTCAGCGAAACAAGTCATGAAATGGAGTCGAAGTTACGAGAACTTTTTA
CGCTACAACAAAAAATGAATGGTTTGATGAAAAGTTGAGAGTTATCTCGC
ATAACGCAGCACAGTACGGATGAATTACATGTGTTACGGGAAAAGAATGC
GCAGTTATCTAAAAAACTTAAACTGGCGGCCAGTGCTGGTTCTGGCGGTG
CTAAATCAAATTCGACGGAAGTATCCGATTTAGAAAAACGGGTTTCGGAA
TTAGAAAATAAACTAAAACGGAAAGAAGAGCTCATCGAATGCAAAGAAGT
GGGAAACTGAATTTCAAACATTGAAAAACAATAACGCCCGCTTGACGGCC
GCCCTACAAGAGAGCGCGGTCAACGTGGAGAAATGGAAAGAACAACTGAA
TAATTATAAAGAAGACAACCAAAGACTCAGAAAAAAGGAGGAGACGCAAT
CACCTGGTAGTCATCGCTCGTCATCAAGCTCAAGCGAAAGTCAAATCAAA
TACGAAAATGATCGATTGAAAAAAGCGCTTGCTCAAAGATGAAAGATAAA
AGCTTTCTTGCACTTCCACGGACACACGAAGATAAATTATCAGATGACGT
AAACAACAATCGCAAACAAAACGAAGAAATACGAAACTACGAAGGCAAAT
TGAAACAATTCAGCGAAACAAGTCATGAAATGGAGTCGAAGTTACGAGAA
CTTTTTACGCTACAACAAAAAATGAATGGTTTGATGAAAAGTTGAGAGTT
ATCTCGCATAACGCAGCACAGTACGGATGAATTACATGTGTTACGGGAAA
AGAATGCGCAGTTATCTAAAAAACTTAAACTGGCGGCCAGTGCTGGTTCT
GGCGGTGCTAAATCAAATTCGACGGAAGTATCCGATTTAGAAAAACGGGT
TTCGGAATTAGAAAATAAACTAAAACGGAAAGAAGAGCTCATCGAATGCA
AAGAAGTGGGAAACTGAATTTCAAACATTGAAAAACAATAACGCCCGCTT
GACGGCCGCCCTACAAGAGAGCGCGGTCAACGTGGAGAAATGGAAAGAAC
AACTGAATAATTATAAAGAAGACAACCAAAGACTCAGAAAAAAGGAGGAG
ACGCAATCACCTGGTAGTCATCGCTCGTCATCAAGCTCAAGCGAAAGTCA
AATCAAATACGAAAATGATCGATTGAAAAAAGCGCTTGCTCAAAGATGAA
AGATAAAAGCTTTCTTGCACTTCCACGGACACACGAAGATAAATTATCAG
ATGACGTAAACAACAATCGCAAACAAAACGAAGAAATACGAAACTACGAA
GGCAAATTGAAACAATTCAGCGAAACAAGTCATGAAATGGAGTCGAAGTT
ACGAGAACTTTTTACGCTACAACAAAAAATGAATGGTTTGATGAAAAGTT
GAGAGTTATCTCGCATAACGCAGCACAGTACGGATGAATTACATGTGTTA
CGGGAAAAGAATGCGCAGTTATCTAAAAAACTTAAACTGGCGGCCAGTGC
TGGTTCTGGCGGTGCTAAATCAAATTCGACGGAAGTATCCGATTTAGAAA
AACGGGTTTCGGAATTAGAAAATAAACTAAAACGGAAAGAAGAGCTCATC
GAATGCAAAGAAGTGGGAAACTGAATTTCAAACATTGAAAAACAATAACG
CCCGCTTGACGGCCGCCCTACAAGAGAGCGCGGTCAACGTGGAGAAATGG
AAAGAACAACTGAATAATTATAAAGAAGACAACCAAAGACTCAGAAAAAA
GGAGGAGACGCAATCACCTGGTAGTCATCGCTCGTCATCAAGCTCAAGCG
AAAGTCAAATCAAATACGAAAATGATCGATTGAAAAAAGCGCTTGCTCAA
AGATGAAAGATAAAAGCTTTCTTGCACTTCCACGGACACACGAAGATAAA
TTATCAGATGACGTAAACAACAATCGCAAACAAAACGAAGAAATACGAAA
CTACGAAGGCAAATTGAAACAATTCAGCGAAACAAGTCATGAAATGGAGT
CGAAGTTACGAGAACTTTTTACGCTACAACAAAAAATGAATGGTTTGATG
AAAAGTTGAGAGTTATCTCGCATAACGCAGCACAGTACGGATGAATTACA
TGTGTTACGGGAAAAGAATGCGCAGTTATCTAAAAAACTTAAACTGGCGG
CCAGTGCTGGTTCTGGCGGTGCTAAATCAAATTCGACGGAAGTATCCGAT
TTAGAAAAACGGGTTTCGGAATTAGAAAATAAACTAAAACGGAAAGAAGA
GCTCATCGAATGCAAAGAAGTGGGAAACTGAATTTCAAACATTGAAAAAC
AATAACGCCCGCTTGACGGCCGCCCTACAAGAGAGCGCGGTCAACGTGGA
GAAATGGAAAGAACAACTGAATAATTATAAAGAAGACAACCAAAGACTCA
GAAAAAAGGAGGAGACGCAATCACCTGGTAGTCATCGCTCGTCATCAAGC
TCAAGCGAAAGTCAAATCAAATACGAAAATGATCGATTGAAAAAAGCGCT
TGCTCAAAGATGAAAGATAAAAGCTTTCTTGCACTTCCACGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000147_pilon | genome | sc0000147_pilon:418212..424343 - |
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