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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:185731..188736- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16.1.p1 ID=MSTRG.16.1.p1|Name=MSTRG.16.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3006bp|location=Sequence derived from alignment at sc0000001_pilon:185731..188736- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAGTATCCAGTATCATACTCACCAACAACGAAAAAATGTCAAGAAGAG
GCAATTTCATCATTTTCAAAGAAGATGAAATATATCGTCTCATTATTGCT
CTCATTGTATTATTCTTAAACCTGGCTGAAGTTTTTTTCATCATTTATAA
ATGGACTATCAAAAAGAAAAGAAAAACAATCTACGAGACATATTTGTTAA
GTTTATCATGTGCTGACGTAACGTTTTCATTGGCTAATATGATTTTTTCG
ACCATGATATTAGCAGATTCTGGGAATCTTATAATCGCGACTATTGGTTA
CGTCCTATCACTATATTTGTCAGTATCCCACATTTCAGCCATAACTGTGG
ATAGACTCATCGCCATAATATTCCCATTGACTCACAAACTGAAAGTTCGA
GTCAAACATGCTCGAATGGTAATCTTAACTTTATGGTTTGTTTGCATTGG
GATTGGAGTAGTGCTCTATTTTGAATACAGGAATAACACATTCGAAAAGT
ACACATTAATTAGTATCAAGTTTATCAAACTCATAATATACGTTTCAGAC
ATTATATTCATTGTTGCTTACATTATTCTATGTTACATTCTACTTCGACA
AGAGAACAAAGCATTGTCATCAACACGAGGTGCAAACACAGAGAAAAACA
TTTTGGTTCTTTGTCTTTTAACATCTCTAGCGTTCGTTTGCTGCACGTTA
CCAGTTGCTATTCACTTCACATTACATTCTCAATGGCCAGCCAGACTGAC
TTATTTACTGGTCGCGAATTCAGGACTGAATTCAATTTTGTATTTCTTTC
ATGGACGATTTGTTCATATTTATCGGAAACGTGTTAAAACACAACGGATG
CAGAAAACAGCATCATCGTCTACGGCTGAATAAATATTTTCAGTTTTGCC
AAATGAAATCTGCTGATAGTGATCAAGCTATCAAGTCAAAAAAAGGACTG
TTTGAGCCGAGCTGGCCCAAAACGTTCTATTGACGTCCATATAACGTTAC
GGACTTTGTAAATATCATATGAACGTTAAAACAACTTTTTGTGCCAGCTA
TGAGTCATTCAAGAAGAGTAATTTTTTGTCGATGGAAATCATGGTTAAGC
TCGTCTTCCTAAGTCAACATCTGGTCCCCTGATTAGGAACAATGTTAGTC
TCGATAGTTGAAAAAAAGAGAAGAGTGAAGAACGAAGGACGAAGGACGAG
TCATCAAAAGATATCATTTTTCTCTTCTAGTAAATGCTTACAGAAGAGCG
CTCCACCTTACACGTAATCTTATTATTTGCTATGTGCAATAATTATCATC
GAACTCGAAACCAAGAAATGTTATGTCTGTTTATTTCATTACCCTTTTCT
ATCGTGCAAATCATCATAATAGACTTGAACTAAAAACAGCATTGCTGTTG
TACACACGAAACTAGCAAGAAGAGAGTGGTAGAACGGTAGAAAACACGAT
ATATAAACAAGAGACCTCTTGATCATTCCAAGATCAAGATGAGAAGTCAT
GACTCAAAATAATTCAGAAGATGGCTGGCTTCTGCTCTTGTTATTACTGT
TGCTCTGCGAATTCAATGAAGGAAAAGTTATAAGACAACGAAACAGAAGC
ACAGTGGAAAACAATTTGCGCACTGGCAACGGCGTAGCAAAACAACAGAT
TCCTTCGAAGTCTCAAGATGTCAGTAGAAACACTATGTTTGCAGCAGAGA
AACGTCAAAATCAAATCAAAAGAGAAATATTGGAATCTTTACCGAAAATA
ACATCATCTATAAAACGAAATGAAAGAATACAGAAATTGCCATATCACAT
TCGCATTCGTCGAGATCTACAAAACGAACGGATTAGCCTGTATCATTACG
GTATGAAGCACTACAAGAAATACGAGGCTAGTGACACGATTTTTGTTTTC
AGTATTTTTGTTATTGTCGTTGGTTTCGTTTTCTTTTTGGTTTTGATATA
CTTATACTGGAATAAACTATACTGTTCTTTGTGGAGTTGACGACTTGAAA
AATTTTGGAGCCTCCATATTCTAAAGGTTTTATGCCTAATTTTTAAAATT
AGTATTTTGTGAGTAATTTAGTGTAACCTTTTTGAAGATATTACATGTTC
AAGCCCATTAAGGCTCAAAATGTTCTTAGAATGCTTTTTAATCTTTTGCC
TCGAAGTCTTTTGTTTTGACATAATCTTTTTTAAAGTACACATGGAACAC
GTCTTTTACACATCACTGTATCAGGGGCCCGGTGAAATCTGTACCGTTGG
ATAACCCGATGAGAAAATTAAAAAAAGTGACCTAGTTTCTGGCCCCTGGG
GTGAAATTGAGTAACCCACCCGGTCAAAAACTTGGAAATTCATTACAATG
CCTCACCCCGGTCAAAAATTGCATTGATTAGGGTTATTTAGATTAGATCT
ATTTAGCCTGGAGATCCATGCTATGATTTATTATTTTATATACTGCTGGT
GAAATGTATAGCATGGTGAGAGTTTGAATTTCACAAATCCTAGTGACGGT
TGAAAACACTGCTAATCAAATTTTGTTATTTTTTCACTGGTCACACTTTT
TTAGAGCAAATGCAAGTTTCGAAATTTGCTTTTTATTTTAGTTAGTGAGG
ATTCGCTAAATTCGAATTTCCCACTGTAAATTTTCCCTTACAGCTCGTAC
CCGTCCGATGACAAATTCTTTTTTATGGGCATCCGTGGATTTTAAAACTT
CACCCGGTCACTGAGACAGGGGTGTTTTTATACAAGCAAACACGGCATAA
AGAGCCAAAGACTTTGATATAAAGGAGGTGATAGCCTTTATTTAATCATT
AACGATTGAAGATTTTTCCACGATATATTTTTACCGTGATTTTTGTCGAG
AATGTAAATAGAGAATGTTTTATAGTCTTTTTTGTATGAATAAATTCTTC
TCGAGATGTATAAATTCATTATTGTCCTCGTTTTCAAACAGATTTCATTG
ATATAAAATTACATATTCACAATGGCTGCGTTTAGACCAACTGGCATTTG
TAATTT Coding sequence (CDS) from alignment at sc0000001_pilon:185731..188736- >MSTRG.16.1.p1 ID=MSTRG.16.1.p1|Name=MSTRG.16.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=882bp|location=Sequence derived from alignment at sc0000001_pilon:185731..188736- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTATCCAGTATCATACTCACCAACAACGAAAAAATGTCAAGAAGAGG
CAATTTCATCATTTTCAAAGAAGATGAAATATATCGTCTCATTATTGCTC
TCATTGTATTATTCTTAAACCTGGCTGAAGTTTTTTTCATCATTTATAAA
TGGACTATCAAAAAGAAAAGAAAAACAATCTACGAGACATATTTGTTAAG
TTTATCATGTGCTGACGTAACGTTTTCATTGGCTAATATGATTTTTTCGA
CCATGATATTAGCAGATTCTGGGAATCTTATAATCGCGACTATTGGTTAC
GTCCTATCACTATATTTGTCAGTATCCCACATTTCAGCCATAACTGTGGA
TAGACTCATCGCCATAATATTCCCATTGACTCACAAACTGAAAGTTCGAG
TCAAACATGCTCGAATGGTAATCTTAACTTTATGGTTTGTTTGCATTGGG
ATTGGAGTAGTGCTCTATTTTGAATACAGGAATAACACATTCGAAAAGTA
CACATTAATTAGTATCAAGTTTATCAAACTCATAATATACGTTTCAGACA
TTATATTCATTGTTGCTTACATTATTCTATGTTACATTCTACTTCGACAA
GAGAACAAAGCATTGTCATCAACACGAGGTGCAAACACAGAGAAAAACAT
TTTGGTTCTTTGTCTTTTAACATCTCTAGCGTTCGTTTGCTGCACGTTAC
CAGTTGCTATTCACTTCACATTACATTCTCAATGGCCAGCCAGACTGACT
TATTTACTGGTCGCGAATTCAGGACTGAATTCAATTTTGTATTTCTTTCA
TGGACGATTTGTTCATATTTATCGGAAACGTGTTAAAACACAACGGATGC
AGAAAACAGCATCATCGTCTACGGCTGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:185731..188736 - |
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