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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000147_pilon:266824..269313+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15996.1.p1 ID=MSTRG.15996.1.p1|Name=MSTRG.15996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2490bp|location=Sequence derived from alignment at sc0000147_pilon:266824..269313+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCCTTAGGTACCCCGAGCACGAACAGGAAACAAAaagttgttcgagtta
aggagtaaggtttataagacattccaaatattttcttttagaaCCAAAAC
GAAATGATCATCACTGCTCTAGCCTTCCTAACCGTAATATGGTTAGCGTA
CAAGAGTTACATCATAAGAAAATACCCACCCGGACCATTTCCATTACCGA
TAATCGGAAATTTACATTTACTCCGGAAAGATATTCATTTAGCTATGGAT
AAGTTATCAAAAGAATACGGAACAATGTTCACCCTATGGATGGCCGATAA
GCCCTTTATTGTCATCACAGATTATGACCTAGCTAAGAAGGTTTGCATCA
CAAAGAGATATGCTGATAGGCTACCACTCTATGTTGGTGATGTTGTTTAT
TCCCGTGGATCTAAAGACATTATTATGGGAGATTacagtgattctttgat
cttgcACCGCAAGCTGGCTCAATCAGCGTTCCAAATGTTTGGGGACGAAA
TGGAGTCTCTAGAGGTCCGGGTTCTAGATAATCTACaaactttctttaaa
acatGTAACCAACATATTGAAGAtccgaaatttcaaatttttcatgatGT
TGAACATACATTTTTTAATGTAATGTCTACAATTGTTCTTGGTGAGAAAA
TACGTAAAGATTGCGATCGCTTCTTAAAAATCCGCGAAGCTGTTTTCTAC
ATGATGCAGTCCGGTGTCACACTCTCGATGGTAAATTTCTACCCCGTTTT
GCGTTATCTTCCGAATCCTGAACTGACCAAGATGATCAAAGTGATTCAAG
AGAGGGATGACGTCTTACAAaatctggtcagtaaaatagaACGAGATTAC
GACATGGTGAATAAACCATCAAACTATATTGAAGCTTTATTAAGATCTAA
AATGGAGAATAGTGATGCTGAAAATAATAATGTTGAAAATGGTGACAAAA
AACAATTTGTAGATTTCACACGTGATCATTTGGAGATGAACGTCTTTGAT
ATGTTTTTGGCTGGAGTCGAAACGGTGGCAGTTTCCGCTACATGGTCAAT
CCTGTTCCTCATTAAATGGCCGGAAGTACAAGAAAAATGCCACCAGCACT
TAGACAGCATTAAAGGACCCAAAACAGATGATGGTATACAAATGCCAGTT
AGACTAGAAGATAAACAACATCTTTCTTATTTCATGGCAGTGATTTATGA
GACTTTGAGATTGGCATCTACTCTaccttttggtgtttttcataAAGCGA
GAGAGAATACAACATTAAATGGTTTCAATATCGAaaaaggtatgttttta
tttggaAAAGATTCTTATTCTAAGAACCTTCCTGTTCGATATTCGGTAAG
ATAAAAAATCCATAGTTCTAGTAAACAACTTAAGGAATTCATTTCGTTCT
CATAACTTTCTCAGACTCCTTCTGCAAAAGACATCAACAATACATTAAAA
AACATCATCACATTTCCTTAAGGGAAATAATTTTAGCGGtcggaaaaaaa
tcgaaaaaatcacatttcgagggaattaattttcgcagttttaCCCTATT
TTGGGCACATTCTTTTATCACCCAAGggattttcacaatttttgaatttg
taatTCGTGGgttctaattttcgcggtttttccgaaagaagaaaatttgt
tATTCCCTTAAAGTAGTTAATAATTAATCTGACTTATATATGGGTGAATT
CTTTATGTGGTTACGATTGAAGAAGTGTTTTGAAAAGGttaaaaatgtat
ttcaaaacttgtatatcaaaattctttttttttcatccaaaagGTACTCC
CTTCATGATCAATTTGTGGACCATCCATCACGATCCTAAAAACTTCAAAG
ATGCTTTACAATTTAATCCAGACAGATTCCTTGATCAAGATGGCTCCCTC
CTCCCATCaagtaaaatcaagaatttcCTCGCGTTCAGCGCGGGACCTCG
ACAATGTATTGGGCAAACTATCGCTAAATCTGAGCTGTTCTTGTTCTTAA
CGAATTTCTTATATAATTTCAAGTTGGAGAATTCACCGTTGAATAAGGAG
CTAAGCACGAATGGAAACACTAAAGTCACGCATGCACCGAAACCGTTCAA
TGTATGTTTGAAACATCGCTGTTGATTGGTTGGTTCATTTAATTTTGAAG
AGGTTTGATTGGACAATCCATATTTTGTTGATTAGGTGTACAGTTAGTGA
ATAATAAGAAAATTCAATCTCGTCTCTCAAAAAATTACATATTAAGATTA
ACTTTTCCAAATAAATAATAACAGACTTACCATTGAACTCTAAATAAATC
ACTAGAATGGTTATCTCCATAGCAACTCCCTTGGAAAGGTCTAACCTGCT
CGTATCTTATTGACATCTTTTACTTGAAAAAGATTAAAGAGTAGCCAAAT
ATTGTAGCCCAGAGCTGTAAAATTGATCGATTTTAGTTGTCTTCCCTAAA
AATATGCTCTTTCCAGTCTTAGATTTTAGAGTTCAATaaa Coding sequence (CDS) from alignment at sc0000147_pilon:266824..269313+ >MSTRG.15996.1.p1 ID=MSTRG.15996.1.p1|Name=MSTRG.15996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000147_pilon:266824..269313+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCATCACTGCTCTAGCCTTCCTAACCGTAATATGGTTAGCGTACAA
GAGTTACATCATAAGAAAATACCCACCCGGACCATTTCCATTACCGATAA
TCGGAAATTTACATTTACTCCGGAAAGATATTCATTTAGCTATGGATAAG
TTATCAAAAGAATACGGAACAATGTTCACCCTATGGATGGCCGATAAGCC
CTTTATTGTCATCACAGATTATGACCTAGCTAAGAAGGTTTGCATCACAA
AGAGATATGCTGATAGGCTACCACTCTATGTTGGTGATGTTGTTTATTCC
CGTGGATCTAAAGACATTATTATGGGAGATTacagtgattctttgatctt
gcACCGCAAGCTGGCTCAATCAGCGTTCCAAATGTTTGGGGACGAAATGG
AGTCTCTAGAGGTCCGGGTTCTAGATAATCTACaaactttctttaaaaca
tGTAACCAACATATTGAAGAtccgaaatttcaaatttttcatgatGTTGA
ACATACATTTTTTAATGTAATGTCTACAATTGTTCTTGGTGAGAAAATAC
GTAAAGATTGCGATCGCTTCTTAAAAATCCGCGAAGCTGTTTTCTACATG
ATGCAGTCCGGTGTCACACTCTCGATGGTAAATTTCTACCCCGTTTTGCG
TTATCTTCCGAATCCTGAACTGACCAAGATGATCAAAGTGATTCAAGAGA
GGGATGACGTCTTACAAaatctggtcagtaaaatagaACGAGATTACGAC
ATGGTGAATAAACCATCAAACTATATTGAAGCTTTATTAAGATCTAAAAT
GGAGAATAGTGATGCTGAAAATAATAATGTTGAAAATGGTGACAAAAAAC
AATTTGTAGATTTCACACGTGATCATTTGGAGATGAACGTCTTTGATATG
TTTTTGGCTGGAGTCGAAACGGTGGCAGTTTCCGCTACATGGTCAATCCT
GTTCCTCATTAAATGGCCGGAAGTACAAGAAAAATGCCACCAGCACTTAG
ACAGCATTAAAGGACCCAAAACAGATGATGGTATACAAATGCCAGTTAGA
CTAGAAGATAAACAACATCTTTCTTATTTCATGGCAGTGATTTATGAGAC
TTTGAGATTGGCATCTACTCTaccttttggtgtttttcataAAGCGAGAG
AGAATACAACATTAAATGGTTTCAATATCGAaaaagGTACTCCCTTCATG
ATCAATTTGTGGACCATCCATCACGATCCTAAAAACTTCAAAGATGCTTT
ACAATTTAATCCAGACAGATTCCTTGATCAAGATGGCTCCCTCCTCCCAT
CaagtaaaatcaagaatttcCTCGCGTTCAGCGCGGGACCTCGACAATGT
ATTGGGCAAACTATCGCTAAATCTGAGCTGTTCTTGTTCTTAACGAATTT
CTTATATAATTTCAAGTTGGAGAATTCACCGTTGAATAAGGAGCTAAGCA
CGAATGGAAACACTAAAGTCACGCATGCACCGAAACCGTTCAATGTATGT
TTGAAACATCGCTGTTGAATGATCATCACTGCTCTAGCCTTCCTAACCGT
AATATGGTTAGCGTACAAGAGTTACATCATAAGAAAATACCCACCCGGAC
CATTTCCATTACCGATAATCGGAAATTTACATTTACTCCGGAAAGATATT
CATTTAGCTATGGATAAGTTATCAAAAGAATACGGAACAATGTTCACCCT
ATGGATGGCCGATAAGCCCTTTATTGTCATCACAGATTATGACCTAGCTA
AGAAGGTTTGCATCACAAAGAGATATGCTGATAGGCTACCACTCTATGTT
GGTGATGTTGTTTATTCCCGTGGATCTAAAGACATTATTATGGGAGATTa
cagtgattctttgatcttgcACCGCAAGCTGGCTCAATCAGCGTTCCAAA
TGTTTGGGGACGAAATGGAGTCTCTAGAGGTCCGGGTTCTAGATAATCTA
CaaactttctttaaaacatGTAACCAACATATTGAAGAtccgaaatttca
aatttttcatgatGTTGAACATACATTTTTTAATGTAATGTCTACAATTG
TTCTTGGTGAGAAAATACGTAAAGATTGCGATCGCTTCTTAAAAATCCGC
GAAGCTGTTTTCTACATGATGCAGTCCGGTGTCACACTCTCGATGGTAAA
TTTCTACCCCGTTTTGCGTTATCTTCCGAATCCTGAACTGACCAAGATGA
TCAAAGTGATTCAAGAGAGGGATGACGTCTTACAAaatctggtcagtaaa
atagaACGAGATTACGACATGGTGAATAAACCATCAAACTATATTGAAGC
TTTATTAAGATCTAAAATGGAGAATAGTGATGCTGAAAATAATAATGTTG
AAAATGGTGACAAAAAACAATTTGTAGATTTCACACGTGATCATTTGGAG
ATGAACGTCTTTGATATGTTTTTGGCTGGAGTCGAAACGGTGGCAGTTTC
CGCTACATGGTCAATCCTGTTCCTCATTAAATGGCCGGAAGTACAAGAAA
AATGCCACCAGCACTTAGACAGCATTAAAGGACCCAAAACAGATGATGGT
ATACAAATGCCAGTTAGACTAGAAGATAAACAACATCTTTCTTATTTCAT
GGCAGTGATTTATGAGACTTTGAGATTGGCATCTACTCTaccttttggtg
tttttcataAAGCGAGAGAGAATACAACATTAAATGGTTTCAATATCGAa
aaagGTACTCCCTTCATGATCAATTTGTGGACCATCCATCACGATCCTAA
AAACTTCAAAGATGCTTTACAATTTAATCCAGACAGATTCCTTGATCAAG
ATGGCTCCCTCCTCCCATCaagtaaaatcaagaatttcCTCGCGTTCAGC
GCGGGACCTCGACAATGTATTGGGCAAACTATCGCTAAATCTGAGCTGTT
CTTGTTCTTAACGAATTTCTTATATAATTTCAAGTTGGAGAATTCACCGT
TGAATAAGGAGCTAAGCACGAATGGAAACACTAAAGTCACGCATGCACCG
AAACCGTTCAATGTATGTTTGAAACATCGCTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000147_pilon | genome | sc0000147_pilon:266824..269313 + |
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