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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:805581..811216- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15977.1.p1 ID=MSTRG.15977.1.p1|Name=MSTRG.15977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5636bp|location=Sequence derived from alignment at sc0000146_pilon:805581..811216- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAAGAGGTTAATGTTGAGGAAAATACGGGCTAATTTTTAGCAATTT
ATGCTGCGAACGAAGTGTGTGTGAATTCGTCATATGTTGTCTGGGTCTCA
ATCGAGTAGGGATTGAGTTGTACTGATTAAGTTTGTAGAAGATTTTCAAG
TGACTGAGAATTTTCTTTGAATAGAGAAAGATTCATCAAATTACGCAAAG
GGGGGTATTTTGAATGACTTTGAAGCTGATGAGACCAATCCCTTAGTTCG
AACTATATAGACATTTTCGAATACACGATTTTCTATATGAACAAACTACA
CTTTTTTTATAAGAACCATTTTATAAGAACAATGAGACTCAAAAATGCCA
AAAAATAAGAACAATTTAAGAACAGTGGAGAGGCTGAAGTTAGAGAGCTA
TAGCAAAAAGAATCACTGGTTTCTAAAATCCTCTAAATAGTAAAGTAAAT
AGCCAAAACTTGTTTTTTACCTTAGAAAAAATAAGAACAAAATAAGAACA
ATTCAAGGCTCAAAGTGCCAAAAAAATAAGATCAGCCGAGCCTCAGCAAA
AATTTACTGGTTCTTATAAAAAAAAAGTGTATATGAAAACAAAAGGCTTC
GATGTTCAAAATGTTAAGTATAATTTGAGAACATTTTAAGACTTTATGAG
CTCTAAAACACATAATTTCTTATAAAATTGCACAAAAATACTCACAAAAT
GATAAAATTAAGAACATTTCATAAGAACATTTTTAGGCTTAAATCTGAAA
CAATTAAGAACATTCGAAGGCTTTTTTTGGATGTTCTTATAAAAAACGTG
TAAAATAAGTTCGAATTAGAGAGAGTGTTAACTGAAATATATCTACAACT
GACGCTCTTCCTCGACGTTCTATGACTTCTACTATTCGATACGCTCTATT
ATTCGATAATATTGAAAGTCACCGTCAACAAGAAACTCTCATAAACGACG
CTCTACTATTCGTCACATTCCCTTATGAGACGAAAGTCCAATACACAGGC
TGAAAAATTAAGACAACTCACGCTTTTACTCGAAATTTTTATGTGCTTGT
TACATGACATTTATTTCTGATTGGTTCGAATTTATTGACACTAATAAAAT
TATCATCTGCAAGTTATAAAGCAAGTAACATGGGAGTAAAATCACGTGAA
CTTTTTCGAGTAATCACATGTTTTGACTACACTGATACAATTTTGCAACC
CGTGTATTCCCCTTGAAAATAGAATTTAGAGAGCGTCAATTGTACTACCT
ATAAGTATATAACATAAATAATTGTCTATTTTCAATTTAAAATATTACAG
TTATATTTTTGTACATGGATCAAGTTGACAATACTAAAAATGAAGTTTGA
ATACGCATTATTGATATTTTCATGCTTGATGGTAACCACCTTGGCAGGTA
AGGAAATATACGGCTCGTTTTATGCCAGGTCTTTTGTCTCTGTTGGAGTT
TGCATGTTTCGAATAAATCCAATTTTGGTTGCTTCTAAAAATCTGCATCT
GCGTGAGTTCTTTTTCTTTTGAGTTTAATTATGCGTAAAATTTTAAAGAA
TACATTTTGAAAAGACCTCTCTCACACCAATCAGAGAACTCGTTTTTTTT
CCTACCATTTCTCTGGTCTTTCTCTAATCTGTCCTCAACGGGTTGAGGGG
TCCGTTCAAGGCTTCCTAAAACCAAAACTGAACGTATTATCAGGGAAAAC
TTCGTCGGGGAAAAGTGACGAAATTTTGTACAAGTGACGAATATTTTCAC
CGACGAAAATTTCCCTGGCCTTAATGCGTTTACCAACTACCAGCAGGTGA
CAAATTGTGCCCCGACAAAAATTTTCCCCGACGAAATTTTCCCCGACGAA
GTTTTCCCCGATAAAGTTTGGGCTATACTTTTAAGTGCGATGGCTGGGAA
ATATTAGTCATCAAACTTTTTAGAAACCGTCCCCTAGATTTTTAGACGTA
ACTTTTTCCTGTTCATTGTCATAAAACTTTAAGTACTTTTTAGTTTAGCT
AAATTTGGAGCGTAAGTTTGAAATTGGAAGGTTACTATGATAAACATTTT
ATTTTCTTCTATAGGTGACCCATTTAAAGATCCCTTGGTAAGTGACTTCA
AATCTTCAAATCTTCAAACTTCACTTAAACATTTAGCGAACCTCTAAGAT
ATTTCGAGGAGCAACAGTTCATTGTTGCAACAACTCTTCTTGTCTTCATA
CACCTTTTCGATCGTAGCCACGCGGTGAGGCGCGTGCCACTTTATTATTT
AATTTACCACCCTAAACTCGATCCAATCCTTTTTTCACACTTTTTTCAAT
TGTATTTAGGTGCAAAAAAAAAGACTGGGACGGTTTTAGGGTTGTAAAAC
GGACAAAAAATGCCCGCGTGGCAATTGGTGGCTACGGTCAAAAAGTGAAT
TGGATGAGTCGTGTTAAACGGCTCATTTTCCTATATTTTACGCTTTCATC
TTCTCTTCTTTTTAACTATTTGTGTATATAATTTCGAATGGTTTAGTGGT
ATCAATGATCATCGAAAAGTCTGAAATGATATTTTGTAATATTCTACCTT
TACTGTTGAATCTGAATATTTTAAACTTAAGAATAATTGCACTTTATTAT
AAATCAGGGATCGGGTCAAAAATGGAAACAATAGGACAACAACAGAATGG
TGAACAATCCTATACATTTCTTTTTTTGTGGAAAATTGTGATTCAATTTC
TAAAATAGGCTTTTCCAGAAAAAAATCGTGCACCCCCTGTTGAGGAGGTC
CATTTCCGTTCCAAGGGGGTAAGGTTTGAAATGCAGTGGAATTCCATAAG
GGTAGACAAAAATCCGTCAAAAATAAGCGGAATTTCAAAGGGGTAATGAT
TGAAAATTTGTAAAAATTCGGAATTCCAGAGGGGTATGATCCTAAAATTG
CCTGGAATTCCAAGGGGGTAGGTCACAAAAGGTTGGACCTCCTCAACTTG
GGGTGCACGATTTTCTTCTGGAAAAGCCCAATATATGACTCAATATTATT
TTTTTAATAGTGTCGCGAAAAAACAGAAAAATGCGTTGCTGACTTAAAGG
CTTGGAAAAGTTTTCGTGTATGTGAGCCTTATGTGAGATGCCATTATGAT
GCGAACGACCCGGCACTTAAGGCGGTAAGTAAACTCATCCTAAGCCTGGA
GATCCATGCTTTGATTTCTTTATTCATAATCTGATGGTGAAATGAATAGC
ATGATCAGGACTGATAGTTTATTGAAAGTTTTCAAATTTCCCCCCAAAAT
AACCCTTCACAGCTGGCACACAAGGCTGTTTCGACGTTTATCTAATGTTC
ACAACGTCTTCATATAACGTTAGATGAACGTTGAAATAACGCTTTATGAC
AGCTGGTTTGATAAGAATCTGCCAATCAAAACACTTTATTGTGCCGGTGG
TCACACTCACTTTCAAAACAAAACCTAAACAGAGATTTTGAATGATTTTA
GATTAAGTCCTAGAGATAATATGCTCAAAAATTATCTTTCCAACGAGAAA
AAAAGTACTCCTATCTGTAGGGTATAACTTATTCATGACGAGGGTTTTGT
TTTTAAGTAAGAGTGATATCGTTTGCTTACTCATCACTTCTTTAATTCAC
AAGCTTTTTCACATTGGATTAAGACATTGAATTAACACGGATATGGAGCA
AGCTTATGGTCAGAAAAAGGAAAAGAAAGACATATTTCTGCTTATATCAT
CAGAATATAACATTAGGCAGACGCTGTCCGGATATGAAATATGTGTCTGA
TATGAAACGGGAACACTTGTGTAAAAATAAAACCTTTAAACCCTATTAGC
CCCAAGCTTTTTTGACTTTTGTATCCCCAGGGGGGGGGGGTAGAATCTAC
CACCCTCGATTATTTTCGATCTAGAAGAGCTATGGCCATGAAATTTGGTA
CAGATGTTCTCCATCATGATACAATTTTCCAGGAAGAAAAAAAAATTTGA
TGACGTCATTCAAAAACTGATGACGTCATCACAAAATTTCCACCTGTCGG
AAAAAAGCCCAAATATATGGTTTACAAAAATGTCTATTACAGTCGAACCA
ATAAAGATATATGCCGGTTTTGCAATTTCCATAAACAGTTTTTCTTAAAA
TCTATGCTGAAGATGAGTAAAATTTTCAAAATTTGATGACGTCATAAACG
ATGACGTCATCATTTTCAAAAAATTTCTTTTGATTTTTTAAATTTGTATT
ATCAATGCCTATCACGTGTCAAAATTTGAAAATGATTGAATAAATAGTTT
AGAAGTTATCAGCACTTTAAAATTTGAGTTTTAAGTGATTTTAGCTGGGT
TTTATGACAACCTATGACCCTAAAATTCTGCACAAGTACTCTTAATAAGA
ATTTATTAAAAGTCAGAAAGTTTCAAGTCGTTTAAAAAAATTTTTTCTCT
GAGATATAAACAAAAGAACTCCAGCGTGGTAGATTCTACCCCCCTGGGGC
TAATAGGGATTTATTAATTCATTTTTCTTTCTTTTAGTGTGTCGATGAAG
CTATTAACTGTGAAAACGGATTCTGGGCCAAGTTACTGTACCCTGTACGG
TTCAAGTGTGCCTTCGAAGGATTCCATTGTATGGAAAAGACTCATTAAAA
TAATTTTACATAAGGCGAAATATATTTTTGGCCATACTTTATTTTTGTTT
TGTTGTTTAGAATCAGTAAATTTTTAGTATTTCCTTACTAGCAAGCTAGA
CGACTAATTCAGACCATGGAGGTATAAAGAAAAACAGGAGTTGAATGTGT
CGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATAAAAGGTATCAAA
AGAAATTCTAAGCTCGCCCGATGAAATAAGACTTCTTAGTAGAACTCAAG
TTTGCTCTGGACATTCTTACTATCAGTATTGAAGATTCTAGCCTTTTAAT
ATACGAAAATTTAGATAAAACTTCGTCCACGAAACAAGTTTATGTTCCAT
TTCGTTATCCGTTCAATTTTGTTTTGAAAAGATATTTCTCAAGCCAGAAA
ACGAAAAGTTCTTTATAAGCACACATGATTTCAGACTCAATTTGTAGCAT
AAAGTCGCTGGAGAAATTTGGAGGAAAGTATCAAGCAATAGTTCACCTTA
AAGAAAAAATTGATCGAAAAATCTTATCATTTGATGAAGGATTGCCAAGT
TTACAGGCCTATTTTTATTTAGTCCAAATATTTTCTTACACTGATGTCAG
AAACAATGAATCTCGTCTCATCTAATTTCTAAAGCTTCAATGAGCCAATA
AGATTTCACCTATGGATAAAAGAGCTCATTTAAAACGCACGATATATGAG
TGAGATTATAAGCATGCATACATCGGAACTTTTTTAATCGTAGGGCGAGC
TTGGTTGAAATAGCATACTTCTCCTGTTTTTTATACCTCTATATTCAGAC
ATAGTAGAAATAAAGCAAAATGTAATGGAAGGAATAATTTTACTTTATAC
AAACTAAATCCCGTAATAATATCGTATTATCATATAACGCCTATACTACT
GTATTACACGCATTATAGAACGACTCCAGTCTAGTATTTCCTATATTTCA
TCTATTAACAAGTTTGCATTAGTAATGACACTTATCTTAATATTTAATTT
TGATAATTTTAATATGTAAATTGTACAATATATCAC Coding sequence (CDS) from alignment at sc0000146_pilon:805581..811216- >MSTRG.15977.1.p1 ID=MSTRG.15977.1.p1|Name=MSTRG.15977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000146_pilon:805581..811216- (Clytia hemisphaerica_ch_hm2_pilon)
TGTGTCGATGAAGCTATTAACTGTGAAAACGGATTCTGGGCCAAGTTACT
GTACCCTGTACGGTTCAAGTGTGCCTTCGAAGGATTCCATTGTATGGAAA
AGACTCATTAATGTCGCGAAAAAACAGAAAAATGCGTTGCTGACTTAAAG
GCTTGGAAAAGTTTTCGTGTATGTGAGCCTTATGTGAGATGCCATTATGA
TGCGAACGACCCGGCACTTAAGGCGGTGACCCATTTAAAGATCCCTTGAT
GAAGTTTGAATACGCATTATTGATATTTTCATGCTTGATGGTAACCACCT
TGGCAGTGTGTCGATGAAGCTATTAACTGTGAAAACGGATTCTGGGCCAA
GTTACTGTACCCTGTACGGTTCAAGTGTGCCTTCGAAGGATTCCATTGTA
TGGAAAAGACTCATTAATGTCGCGAAAAAACAGAAAAATGCGTTGCTGAC
TTAAAGGCTTGGAAAAGTTTTCGTGTATGTGAGCCTTATGTGAGATGCCA
TTATGATGCGAACGACCCGGCACTTAAGGCGGTGACCCATTTAAAGATCC
CTTGATGAAGTTTGAATACGCATTATTGATATTTTCATGCTTGATGGTAA
CCACCTTGGCAGTGTGTCGATGAAGCTATTAACTGTGAAAACGGATTCTG
GGCCAAGTTACTGTACCCTGTACGGTTCAAGTGTGCCTTCGAAGGATTCC
ATTGTATGGAAAAGACTCATTAATGTCGCGAAAAAACAGAAAAATGCGTT
GCTGACTTAAAGGCTTGGAAAAGTTTTCGTGTATGTGAGCCTTATGTGAG
ATGCCATTATGATGCGAACGACCCGGCACTTAAGGCGGTGACCCATTTAA
AGATCCCTTGATGAAGTTTGAATACGCATTATTGATATTTTCATGCTTGA
TGGTAACCACCTTGGCAGTGTGTCGATGAAGCTATTAACTGTGAAAACGG
ATTCTGGGCCAAGTTACTGTACCCTGTACGGTTCAAGTGTGCCTTCGAAG
GATTCCATTGTATGGAAAAGACTCATTAATGTCGCGAAAAAACAGAAAAA
TGCGTTGCTGACTTAAAGGCTTGGAAAAGTTTTCGTGTATGTGAGCCTTA
TGTGAGATGCCATTATGATGCGAACGACCCGGCACTTAAGGCGGTGACCC
ATTTAAAGATCCCTTGATGAAGTTTGAATACGCATTATTGATATTTTCAT
GCTTGATGGTAACCACCTTGGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146_pilon | genome | sc0000146_pilon:805581..811216 - |
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