MSTRG.15958.1.p2 (mRNA) -

Overview
NameMSTRG.15958.1.p2
Unique NameMSTRG.15958.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000146_pilon:225252..226604+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15958.1.p2 ID=MSTRG.15958.1.p2|Name=MSTRG.15958.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1353bp|location=Sequence derived from alignment at sc0000146_pilon:225252..226604+ (Clytia hemisphaerica_ch_hm2_pilon)
AATATCTGttcaaaaggagaaaaaaaagaactatcaactttgaattttat
tttggcAATTTACATTATTTTGAATACAATACAAGCTAACAAGCCATAAT
AAATCATCTATTTTCTATCCTTAAAAATTATTCATTAATCCATAGTGCTC
CATAATACAGGACCATCAATTTAAAAAACGGAGTGATGGACTAGAGAACT
GCGAGGTGGGGCAGTTCCTCAAACTTGCCACATAACTAGGTTAGCATTTA
ACGCCGGAAAGTGAGTGCgagaatttttcgaaaattaccACGGCTCAAAT
TTTTAGACCATGGTATTAACATTGACTAATTAAATCATACCATCTTTATT
TTCcagcttaaaaaataaaatgtcaaaCCTAATCCCAGCCTATGGCTATG
GTAGCATTCTGGATCAGCTACTTGGGCTGAATCCACCACCACCGTCACCA
GCTGACTCAGATGTTACTGTGGCATATGTGAGTATTTCTTAGGGAACTTG
ATTTGGCGAGTATAAAAAACGTATTTTTGAATTGAGGAGTAAGCAGAATA
TTTGATTACTATTTTTCCATCGTTTTAATTTTGCAGCTCaaccaaattaa
aagttttgtcACGTTATTATAGTTGTGGGAATTTTTGTTCGATATGTCGG
CTCAGTTAATTTTTCCTTTGATAGTTTAACTCGCCGAAAGTAAGTTCCCT
AAGATTTAATGAAAGATTGTAAATTGCCTGGTTTAGTTTAAATCAGACAT
CATAGTGCCAGTATGCGTTTTATTTTGGGACATTTTGTATACAAGCTTAT
CAGATATTTTTATATTTGGTCTACAGATTATTTATTAGATCCTAAGAaaa
ctttaatatttttctcaCAAAAGGCTGTTGAGGATCAAGATCAGGTGACT
GCAGAGATGGTCATCAAAGATGAACCAGGCGAGATTGAAGAACATGACGA
GAATGTAGAACCAGAACAGGACGAGATTGTAGAACCAGAACAGGACGAGA
ATGTAGAACCAGAACAGGACGAGATTGTAGAACCAGAACAGGACGAGAAT
GTAGAACCAGAACAGGACGAGAATGTAGAACCAGAACAGGACGAGAATGA
ACAAGAACAGAATTTAGGAGGAGGTGGCAATTAGGTGGTAGGAAGAGGAA
ATCAGGTGGTCGCAAGAGGAAGAGGAAGAGGTGGCAATCGATATGCCCGA
AGAGGTTGGGTCCATCGCCATTACGGAAGAAGGGGTCGTGGTAGAGGAGG
GAATGGTGGCGGGATGGTCGCAGAGCAGCTGCTTGAGCTCTTCCGCCTCC
AACTGGAGACATTTAAcaactttcaataattttttttttcagttattttt
tag

Coding sequence (CDS) from alignment at sc0000146_pilon:225252..226604+

>MSTRG.15958.1.p2 ID=MSTRG.15958.1.p2|Name=MSTRG.15958.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000146_pilon:225252..226604+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTTTTATTTTGGGACATTTTGTATACAAGCTTATCAGATATTTTTA
TATTTGGTCTACAGATTATTTATTAGATCCTAAGAaaactttaatatttt
tctcaCAAAAGGCTGTTGAGGATCAAGATCAGGTGACTGCAGAGATGGTC
ATCAAAGATGAACCAGGCGAGATTGAAGAACATGACGAGAATGTAGAACC
AGAACAGGACGAGATTGTAGAACCAGAACAGGACGAGAATAATGTAGAAC
CAGAACAGGACGAGAATGAACAAGAACAGAATTTAGGAGGAGGTGGCAAT
TAGATGCGTTTTATTTTGGGACATTTTGTATACAAGCTTATCAGATATTT
TTATATTTGGTCTACAGATTATTTATTAGATCCTAAGAaaactttaatat
ttttctcaCAAAAGGCTGTTGAGGATCAAGATCAGGTGACTGCAGAGATG
GTCATCAAAGATGAACCAGGCGAGATTGAAGAACATGACGAGAATGTAGA
ACCAGAACAGGACGAGATTGTAGAACCAGAACAGGACGAGAATAATGTAG
AACCAGAACAGGACGAGAATGAACAAGAACAGAATTTAGGAGGAGGTGGC
AATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15958MSTRG.15958Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15958.1.p2.exon1MSTRG.15958.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15958.1.p2.exon2MSTRG.15958.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15958.1.p2MSTRG.15958.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146_pilongenomesc0000146_pilon:225252..226604 +