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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:180447..182570+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15954.1.p1 ID=MSTRG.15954.1.p1|Name=MSTRG.15954.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2124bp|location=Sequence derived from alignment at sc0000146_pilon:180447..182570+ (Clytia hemisphaerica_ch_hm2_pilon)
ACGCATTTAACCACCTGAATAATTGATATCCTCAACCAAGAGATTCgact
tttttcttgaaagtcCAATTGCATTCTCGTGTTTTCTTTAatacaatttt
atattttatgtgtTATGTCATTTTTACTCTAATTTTACTCTAAGTATTGA
TGCAACAATGTCTTCTTCATATGGACGACTGGTTAACGATTCCCCTGAAA
TTTATGCAAATTGTGTAATGAAGCGAGAAAGGATTGGAGATTCATTCGcc
ctttgtttgtttgtaaagAAAGATATTGATATTGAAATTGAGACTGAGTT
AAGGTAAAAATCTGGTTCTTTGTAAGGTTAATCAGGtttttttACAACTT
GACCAACAAACAACTTGAACAACATTTTGAAGGGAGCTCTAGCTGGAATA
CCAGAAAAAATAATAGTACAGTActaataaaatttttaacttaAATATCT
TGTGATCAAGCTATCAAAACAGTATAAAGCAGGCCTTGTTTCAAGAACCT
GGTTACAATTCACGAGAGTGCTCTGCTTATTGCTTAATAGTTTTTTAAGA
TTATCTTCTGAAAGTTAATTCTCTATTTCTTgactttcttgaaatttttc
ttcctGGGTACTGAGTTTTATCTTttgaatttgttaaaattttacatCGG
AAAAGGAAATAGAAATTTCTGCAACAAATAATCTAGGTCTCCGCATACCT
TCAGTTCAGTTTAGCTTTTGTAACACAATTTAAGTTggaccaaaaaatat
ttttgacttttgttgtagGTATGACTATTGTTTTGGGTTACGGACAGCAC
ATATAGATACTGATGCAATGCCATGGAGACTGAATGAAGTAAGTTTACTC
TATATTATTCAGGCAGATCTTTAATGTTCATTTATACTGTCAAAATTTTC
ACATCAAATTAAATCTGTGAATAACATGTTTCACGGTCGttttttttATT
CAGGAGCGTTACGGAAAACCCTGCACAATACCTGTTCCAACTACCTTTGA
AAATTTGGTAAGACTTTTATATGTGACGATTCATAGCAAAAAGAgtacaa
aattttgttttcatgtgCTAGGCCTTGAGCGCAATTTACTGATTtggatt
aaatgttttttaattttatttacattGATGCTCCCCCTTACAAAGAgtta
aaaatgttgataaatatTTTATATGAGGTGAGTTGAAGTTATTATTTTGG
AAGGTCTGATTgttcaaaattctttgaaagtATCGTAACTTTTCGCTCTA
CAGGAGGCTAAAGAAGAAACAGTGAAATTGGTCCATTTTGAAGTAGAATA
TAGGATTGGAGGCGATGGAACAGTAGAATTGGACGATGGAGAAGCAGAAC
TGATTGATGGAAAAACAGAACTGAACAATGGAGAAGCAGAACTGAACAAT
GGAGAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGATGAAGAAAC
AGAACTTAACGACGGAGTGGCAGAACTTAACAATGGAGAATTAGAATTCA
ACAGTGGAAAAGCAGAACTGAACGATGGAGAAGCAGAACTGATCGATGTA
AAAGCAGAACTCGTCAATGTAAAAACAGCACTCATCCATGTAAAAACAGA
ACTTATCGATGGAGAAGCAGAACTGAACAATGGAGAAGCAGAACTGAACA
ATGGAGAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGATGAAGAA
ACAGAACTTAACGACGGAGTGGCAGAACTTAACGATGGAGAATTAGAATT
GAACAGTGGAAAAGCAGAACTGAACGATGGAGAAGCACAACTGATCACTG
TAATAACAGAACTCATTGATAGAAAAACTGAACTTATCAATGGAAAATCA
GAACTGAACATTGGAGAAGCAGAACTGAACAATGGAGAAGCAGAGCCGAA
TGGTGGAAAAGCAGAACTGATTGATGAAGTAACAGAACTCAACGACGGAG
TTGCAGAACTTAACAATGGAGAATCAGAAGTCAACAGTGGAAAAGCAGAA
CTGAACGGTGTAGATGCAGAACTAAACGGTGTAGATGCAGAACTAATCGA
TGATGAAACCATTACTGAAGTTGAACAagtcaaatttgatgaagaCATTA
TACCACCTACCCCAGATAAAAAGG Coding sequence (CDS) from alignment at sc0000146_pilon:180447..182570+ >MSTRG.15954.1.p1 ID=MSTRG.15954.1.p1|Name=MSTRG.15954.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4560bp|location=Sequence derived from alignment at sc0000146_pilon:180447..182570+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTTCATATGGACGACTGGTTAACGATTCCCCTGAAATTTATGC
AAATTGTGTAATGAAGCGAGAAAGGATTGGAGATTCATTCGccctttgtt
tgtttgtaaagAAAGATATTGATATTGAAATTGAGACTGAGTTAAGGTAT
GACTATTGTTTTGGGTTACGGACAGCACATATAGATACTGATGCAATGCC
ATGGAGACTGAATGAAGAGCGTTACGGAAAACCCTGCACAATACCTGTTC
CAACTACCTTTGAAAATTTGGAGGCTAAAGAAGAAACAGTGAAATTGGTC
CATTTTGAAGTAGAATATAGGATTGGAGGCGATGGAACAGTAGAATTGGA
CGATGGAGAAGCAGAACTGATTGATGGAAAAACAGAACTGAACAATGGAG
AAGCAGAACTGAACAATGGAGAAGCAGACCTGAATGGTGGAAAAGCAGAA
CTGATTGATGAAGAAACAGAACTTAACGACGGAGTGGCAGAACTTAACAA
TGGAGAATTAGAATTCAACAGTGGAAAAGCAGAACTGAACGATGGAGAAG
CAGAACTGATCGATGTAAAAGCAGAACTCGTCAATGTAAAAACAGCACTC
ATCCATGTAAAAACAGAACTTATCGATGGAGAAGCAGAACTGAACAATGG
AGAAGCAGAACTGAACAATGGAGAAGCAGACCTGAATGGTGGAAAAGCAG
AACTGATTGATGAAGAAACAGAACTTAACGACGGAGTGGCAGAACTTAAC
GATGGAGAATTAGAATTGAACAGTGGAAAAGCAGAACTGAACGATGGAGA
AGCACAACTGATCACTGTAATAACAGAACTCATTGATAGAAAAACTGAAC
TTATCAATGGAAAATCAGAACTGAACATTGGAGAAGCAGAACTGAACAAT
GGAGAAGCAGAGCCGAATGGTGGAAAAGCAGAACTGATTGATGAAGTAAC
AGAACTCAACGACGGAGTTGCAGAACTTAACAATGGAGAATCAGAAGTCA
ACAGTGGAAAAGCAGAACTGAACGGTGTAGATGCAGAACTAAACGGTGTA
GATGCAGAACTAATCGATGATGAAACCATTACTGAAGTTGAACAagtcaa
atttgatgaagaCATTATACCACCTACCCCAGATAAAAAGATGTCTTCTT
CATATGGACGACTGGTTAACGATTCCCCTGAAATTTATGCAAATTGTGTA
ATGAAGCGAGAAAGGATTGGAGATTCATTCGccctttgtttgtttgtaaa
gAAAGATATTGATATTGAAATTGAGACTGAGTTAAGGTATGACTATTGTT
TTGGGTTACGGACAGCACATATAGATACTGATGCAATGCCATGGAGACTG
AATGAAGAGCGTTACGGAAAACCCTGCACAATACCTGTTCCAACTACCTT
TGAAAATTTGGAGGCTAAAGAAGAAACAGTGAAATTGGTCCATTTTGAAG
TAGAATATAGGATTGGAGGCGATGGAACAGTAGAATTGGACGATGGAGAA
GCAGAACTGATTGATGGAAAAACAGAACTGAACAATGGAGAAGCAGAACT
GAACAATGGAGAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGATG
AAGAAACAGAACTTAACGACGGAGTGGCAGAACTTAACAATGGAGAATTA
GAATTCAACAGTGGAAAAGCAGAACTGAACGATGGAGAAGCAGAACTGAT
CGATGTAAAAGCAGAACTCGTCAATGTAAAAACAGCACTCATCCATGTAA
AAACAGAACTTATCGATGGAGAAGCAGAACTGAACAATGGAGAAGCAGAA
CTGAACAATGGAGAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGA
TGAAGAAACAGAACTTAACGACGGAGTGGCAGAACTTAACGATGGAGAAT
TAGAATTGAACAGTGGAAAAGCAGAACTGAACGATGGAGAAGCACAACTG
ATCACTGTAATAACAGAACTCATTGATAGAAAAACTGAACTTATCAATGG
AAAATCAGAACTGAACATTGGAGAAGCAGAACTGAACAATGGAGAAGCAG
AGCCGAATGGTGGAAAAGCAGAACTGATTGATGAAGTAACAGAACTCAAC
GACGGAGTTGCAGAACTTAACAATGGAGAATCAGAAGTCAACAGTGGAAA
AGCAGAACTGAACGGTGTAGATGCAGAACTAAACGGTGTAGATGCAGAAC
TAATCGATGATGAAACCATTACTGAAGTTGAACAagtcaaatttgatgaa
gaCATTATACCACCTACCCCAGATAAAAAGATGTCTTCTTCATATGGACG
ACTGGTTAACGATTCCCCTGAAATTTATGCAAATTGTGTAATGAAGCGAG
AAAGGATTGGAGATTCATTCGccctttgtttgtttgtaaagAAAGATATT
GATATTGAAATTGAGACTGAGTTAAGGTATGACTATTGTTTTGGGTTACG
GACAGCACATATAGATACTGATGCAATGCCATGGAGACTGAATGAAGAGC
GTTACGGAAAACCCTGCACAATACCTGTTCCAACTACCTTTGAAAATTTG
GAGGCTAAAGAAGAAACAGTGAAATTGGTCCATTTTGAAGTAGAATATAG
GATTGGAGGCGATGGAACAGTAGAATTGGACGATGGAGAAGCAGAACTGA
TTGATGGAAAAACAGAACTGAACAATGGAGAAGCAGAACTGAACAATGGA
GAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGATGAAGAAACAGA
ACTTAACGACGGAGTGGCAGAACTTAACAATGGAGAATTAGAATTCAACA
GTGGAAAAGCAGAACTGAACGATGGAGAAGCAGAACTGATCGATGTAAAA
GCAGAACTCGTCAATGTAAAAACAGCACTCATCCATGTAAAAACAGAACT
TATCGATGGAGAAGCAGAACTGAACAATGGAGAAGCAGAACTGAACAATG
GAGAAGCAGACCTGAATGGTGGAAAAGCAGAACTGATTGATGAAGAAACA
GAACTTAACGACGGAGTGGCAGAACTTAACGATGGAGAATTAGAATTGAA
CAGTGGAAAAGCAGAACTGAACGATGGAGAAGCACAACTGATCACTGTAA
TAACAGAACTCATTGATAGAAAAACTGAACTTATCAATGGAAAATCAGAA
CTGAACATTGGAGAAGCAGAACTGAACAATGGAGAAGCAGAGCCGAATGG
TGGAAAAGCAGAACTGATTGATGAAGTAACAGAACTCAACGACGGAGTTG
CAGAACTTAACAATGGAGAATCAGAAGTCAACAGTGGAAAAGCAGAACTG
AACGGTGTAGATGCAGAACTAAACGGTGTAGATGCAGAACTAATCGATGA
TGAAACCATTACTGAAGTTGAACAagtcaaatttgatgaagaCATTATAC
CACCTACCCCAGATAAAAAGATGTCTTCTTCATATGGACGACTGGTTAAC
GATTCCCCTGAAATTTATGCAAATTGTGTAATGAAGCGAGAAAGGATTGG
AGATTCATTCGccctttgtttgtttgtaaagAAAGATATTGATATTGAAA
TTGAGACTGAGTTAAGGTATGACTATTGTTTTGGGTTACGGACAGCACAT
ATAGATACTGATGCAATGCCATGGAGACTGAATGAAGAGCGTTACGGAAA
ACCCTGCACAATACCTGTTCCAACTACCTTTGAAAATTTGGAGGCTAAAG
AAGAAACAGTGAAATTGGTCCATTTTGAAGTAGAATATAGGATTGGAGGC
GATGGAACAGTAGAATTGGACGATGGAGAAGCAGAACTGATTGATGGAAA
AACAGAACTGAACAATGGAGAAGCAGAACTGAACAATGGAGAAGCAGACC
TGAATGGTGGAAAAGCAGAACTGATTGATGAAGAAACAGAACTTAACGAC
GGAGTGGCAGAACTTAACAATGGAGAATTAGAATTCAACAGTGGAAAAGC
AGAACTGAACGATGGAGAAGCAGAACTGATCGATGTAAAAGCAGAACTCG
TCAATGTAAAAACAGCACTCATCCATGTAAAAACAGAACTTATCGATGGA
GAAGCAGAACTGAACAATGGAGAAGCAGAACTGAACAATGGAGAAGCAGA
CCTGAATGGTGGAAAAGCAGAACTGATTGATGAAGAAACAGAACTTAACG
ACGGAGTGGCAGAACTTAACGATGGAGAATTAGAATTGAACAGTGGAAAA
GCAGAACTGAACGATGGAGAAGCACAACTGATCACTGTAATAACAGAACT
CATTGATAGAAAAACTGAACTTATCAATGGAAAATCAGAACTGAACATTG
GAGAAGCAGAACTGAACAATGGAGAAGCAGAGCCGAATGGTGGAAAAGCA
GAACTGATTGATGAAGTAACAGAACTCAACGACGGAGTTGCAGAACTTAA
CAATGGAGAATCAGAAGTCAACAGTGGAAAAGCAGAACTGAACGGTGTAG
ATGCAGAACTAAACGGTGTAGATGCAGAACTAATCGATGATGAAACCATT
ACTGAAGTTGAACAagtcaaatttgatgaagaCATTATACCACCTACCCC
AGATAAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000146_pilon | genome | sc0000146_pilon:180447..182570 + |
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