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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:832728..836656- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15942.1.p1 ID=MSTRG.15942.1.p1|Name=MSTRG.15942.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3929bp|location=Sequence derived from alignment at sc0000145_pilon:832728..836656- (Clytia hemisphaerica_ch_hm2_pilon)
CTGAGGTAAAACTGAAGGCATAGATAAGATTTCACAAATCTTCTAATCGG
GAACGAGTCTAAAAGTCAATAATGCAATCCAATTTGGGGGAATGTGGACG
GAACGTGCGACTGATATAGATTTTAAAAGGTTCATTAACTAAGACAGGAA
TCCTAATAGAGAATCTCGAGTGGACGGAATTGTTGCAGCTCTGAATAAGT
AGTAAAACAAAGCAATAAACCTTTTGTAAAAGAAAGACAATTAGTAAAAG
AAGAACATAGAAGGAAAACTTGTTTACAAATAGCTTGCCAAAGTTAAAAC
ACAGTCTACAAATCGAATAGCCAACCAACTCATACAGACTGAAAGACTGC
CGAATTCAAACTCATTCATCCAAATTTGCACTGAAGTACATAGAACAACA
GAACAACAGAACGATGGAACCGTGGAAGCAGTGGTTAGCCTTATTGGTTG
TCCATCTAACCTTTACATACATATCTGGATCGCAAACGAGAAAAACTGAA
ATCACTAATAAAGCCGTTTCCGGTACGATATACAAGATTAAACAAAGTTC
GTTCCGGAAAGCATTATATATCACACCGAACGGTGATAACCATCATTTAA
GTAGCCTGGAAACGATTGAACAAGATGCTACACCAATGAATTGTGGGAAG
GCTTGTCAAGATCACACTTCGTGTTGGAGTTTCATGTTTTACATGACCAC
GCCACCAACGTGTACTCTACTGAACGGTGCTATCGACAGAAGAAAAATTA
TCAAAAATACTTCAGTTCTCTACTATGAAATCGAGGTTAGAATTCTTTTC
TAAAAAAACCTTAAATCGAAGTTTGTTGATTTGTCAATATTTATCACTAG
TGAAAATTTCAAGTCGAGTAGAACCTACCTAACGATAAATTGCGTCTTTG
TTCTGTGATATCGTTCACTTTCTATCCATTTTCAATAATCAATAATCCTA
TTCACTTTACTTATCAACTCTTAGCGGCGCGGTAAGGTTTTGAGGAGACG
AACGTATGGAAAACACAAGCGTAGGAGCGCTTTTATGAAAAATATACGAT
ACTCTCGCATTTTTAAGCCATAAAGAAACGCAATTTTAGTTAAGCAAATC
GAACACTTTAAAGAGATTAAACTCCACCGCAGAGGTAGGGAAATTGTCTC
TAGAGTTTTGGCGGGAATCCACTCGGTTTAAAAATGCCGTGCGCCGAGAG
AAATCTTTCTTGTAAATTCATTACATTCAGTCCCCTAAAAAGCCGACCGC
GTCGTTAAGGGTTGATGGATGTATATTTTACTTGTAGATTTTGGTCGGGA
TTAAGGAAAAGTTTGAGATGAAGGGTAATCAATGACCTGTTATCATTCTT
CAATTATAGATTTTGGCATTCATCAAAATGAATCCTTTTTTTATAGAACC
AATGTAATTTAAATGAGAATCTTTGCAACCTTGGTACATGTTTCCCACAC
TTCAATAACGACTCCTATACTTGCCACTGTCCTCAATCATACACTGGTAA
CAACTGTCAGGTGCTGGATCAATCTGAAGCCGGCCAAACCTCTCGAACAA
CAACTTCAATCCAGGCCTCAACTTCGCAAACCACGACGACCTCAATCCAG
GCTTCTACACCGCTAACCACAACGACCTCGATCCAGGCTTCTACTCCGCA
AACCACAACGACCTCGATCCAGGCCTCAACTTCGCAAACCACGACAACCT
CGATCCAGGCTTCTACTCCGCAGACCACAACGACCTCGATCCAGGCTTCT
ACTCGGCAAACCTCAACGACCTCGATCCAGGCCTCAACTTCGCGAACCAC
GACAACCTCGATCCAGGCTTCTACTCCGCAGACCACAACGACCTCGATCC
AGGCTTCTACTTCGCAAACCACAACAACCTCGATCCAGGCCTCAACTTCG
CAAACCACAACTTCAATTCTGGCTCCTTCAGTCAGTAACGACACACCGGA
CTTTCCCACTGTTTTTCCGGAAATCACGACAATCCCAATCCAGGCCTCCT
CAACTTCGCAAATCACAACTTCCATCAAGGCTCCTTCTGCCAGTTACGAC
GTACCAGACTTTCCCACTGTTGCTCCGTCTTATGGTTTCCTAGAATCCAG
CGCCATTACGCCCTCGAATGTTGCCGAAGCTAACCCAGCCACTTACACCA
CATCAACACGCGATAGTTCAGCAACAATAACAGCTTCAATCACCAATAAT
ACCAGCTCAACCTCGTCGAATCTCGCAAGGTAAAGTATTACTTTCTATGT
CTGAAAGGCAATAGTGAGTTTGTATATCTGTGTTTTTATGTGACAGAGAC
AGTTCACCTCTAATTGGTGTACATCCTGACTGACTGAGGACGACGGTAAA
TCAGCACTTTTTTCAGAACTGCGAGTTTTTCTCTTCAGTCACTCCACCGT
CCTCAAAAGCGAAAAAACACAAACTAGCTGATAACCCAGGTAAGACGTTT
GTGTGAATGTTGTAGAATGCTGAAGAGTCTCATTATTTTAGTAGTTGACA
TTACACCCTAACAATAAACCTCATGTTTACTTAGATTTGTGAATGGTTCG
TATTACGTCACCATTGACAACCAACAAGTCGAAGTGACATCACAAAACGT
TCATTACGTCAACAATACAGTGTTCATCGACATTAATGGTGAACTAGTAC
CATTACCGCTAGCTGTGGTCACTACAAATCATAATGGAATGCTTAGTATC
ACTGTTGATGGTATCTTCATTGGAACTTTGTCAAACGATGGGAACTTTAC
CATTGCTCCTGAGCCAATAAAAAGTGTAGAGTAAGTGAAATCTTCTGTAT
GACAATATTCTTCATCAGATTCATCTGGAAGTTTCTCTTTTTTGTAAAGT
TTGAACCAAAAATAAAAAACAATTCAACTACTTTAAAAAAAGACATAAAA
TTCTTAATTTCTTAATAATTAGAATCCAAATTTCAAGAAAAAGGATCAAG
CCCTTGGTTGGCAATCGCTGTCAGCAATTAAAACCCACAGCATTGATCAT
CTTCGTTCCATCTTTTTCCAGGAACAAAACAGCATCACATTCATCAGATA
TTTACACAGAATCAGCAACAACAACAACAACAACAACATCAAAATCAGTG
AATATAACACCAAGCACAGCTCTTCATTCCACACAAATCTCCATGACAAC
GTCAATATCAATGGACCATCAGAAAGCAGCTAGCAGTTCAACTTCATTAA
AAGCAATCGGCCTCGTGATTTTCATATGTTCAGTTGCATCACTGTTTCTA
GAATAGATTAACTCTAATTTAGACGGCTCACTTTTCGCCCTATCTAATCT
AATTGTGAATTAAAATGGGCAGAAAGCTGTCTGTCTAAAGTCAATGCAAC
CGATTGGGTTACGGTCAGGAGGGTCATTGACCTTTATCTTGCTCAACCGG
ATCGAGCTCTTTCCATATGAAGTGAGAAAAATGAATAATTCATTTTTTCA
AATTAAGAAGTGACAAAAGTCTAAAGTTTGTTTTGATAAAGATACCGACG
ACGAGACAATAATTATATTAAACACTAGTCACGCAACTGTAGAACAGATT
TTCTTTGTAATTTTTCTTGAGGTTGGATTCGAAATTCGAAGAAGGACAAC
ATTTGGTTCTGGATATTTTCGGACAAGTGTAATTCGAATATCACCAGAAC
TGCTACAATCAGGGACAAAATACTTGGCACAAAAGGGAAATTCACCAGGG
TGTTTTGAAACCACAATCGATTTGTAAGTGCTCTAAAGTAGGTTCGAAGG
GTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGACTTAAGACCTT
AGGATGCGAGGATCCAAAAGTTCAAAAATGGTCCACTAGGGCTTGAAATA
TAGCCTAGAAACCAATAAATCCCTCCCAGATCGAAATAATCGATGAAATC
AAGTTGAGGGCTTAAAATTGACATTCTCG Coding sequence (CDS) from alignment at sc0000145_pilon:832728..836656- >MSTRG.15942.1.p1 ID=MSTRG.15942.1.p1|Name=MSTRG.15942.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6744bp|location=Sequence derived from alignment at sc0000145_pilon:832728..836656- (Clytia hemisphaerica_ch_hm2_pilon)
GAACAAAACAGCATCACATTCATCAGATATTTACACAGAATCAGCAACAA
CAACAACAACAACAACATCAAAATCAGTGAATATAACACCAAGCACAGCT
CTTCATTCCACACAAATCTCCATGACAACGTCAATATCAATGGACCATCA
GAAAGCAGCTAGCAGTTCAACTTCATTAAAAGCAATCGGCCTCGTGATTT
TCATATGTTCAGTTGCATCACTGTTTCTAGAATAGATTTGTGAATGGTTC
GTATTACGTCACCATTGACAACCAACAAGTCGAAGTGACATCACAAAACG
TTCATTACGTCAACAATACAGTGTTCATCGACATTAATGGTGAACTAGTA
CCATTACCGCTAGCTGTGGTCACTACAAATCATAATGGAATGCTTAGTAT
CACTGTTGATGGTATCTTCATTGGAACTTTGTCAAACGATGGGAACTTTA
CCATTGCTCCTGAGCCAATAAAAAGTGTAGAAACCAATGTAATTTAAATG
AGAATCTTTGCAACCTTGGTACATGTTTCCCACACTTCAATAACGACTCC
TATACTTGCCACTGTCCTCAATCATACACTGGTAACAACTGTCAGGTGCT
GGATCAATCTGAAGCCGGCCAAACCTCTCGAACAACAACTTCAATCCAGG
CCTCAACTTCGCAAACCACGACGACCTCAATCCAGGCTTCTACACCGCTA
ACCACAACGACCTCGATCCAGGCTTCTACTCCGCAAACCACAACGACCTC
GATCCAGGCCTCAACTTCGCAAACCACGACAACCTCGATCCAGGCTTCTA
CTCCGCAGACCACAACGACCTCGATCCAGGCTTCTACTCGGCAAACCTCA
ACGACCTCGATCCAGGCCTCAACTTCGCGAACCACGACAACCTCGATCCA
GGCTTCTACTCCGCAGACCACAACGACCTCGATCCAGGCTTCTACTTCGC
AAACCACAACAACCTCGATCCAGGCCTCAACTTCGCAAACCACAACTTCA
ATTCTGGCTCCTTCAGTCAGTAACGACACACCGGACTTTCCCACTGTTTT
TCCGGAAATCACGACAATCCCAATCCAGGCCTCCTCAACTTCGCAAATCA
CAACTTCCATCAAGGCTCCTTCTGCCAGTTACGACGTACCAGACTTTCCC
ACTGTTGCTCCGTCTTATGGTTTCCTAGAATCCAGCGCCATTACGCCCTC
GAATGTTGCCGAAGCTAACCCAGCCACTTACACCACATCAACACGCGATA
GTTCAGCAACAATAACAGCTTCAATCACCAATAATACCAGCTCAACCTCG
TCGAATCTCGCAAGATGGAACCGTGGAAGCAGTGGTTAGCCTTATTGGTT
GTCCATCTAACCTTTACATACATATCTGGATCGCAAACGAGAAAAACTGA
AATCACTAATAAAGCCGTTTCCGGTACGATATACAAGATTAAACAAAGTT
CGTTCCGGAAAGCATTATATATCACACCGAACGGTGATAACCATCATTTA
AGTAGCCTGGAAACGATTGAACAAGATGCTACACCAATGAATTGTGGGAA
GGCTTGTCAAGATCACACTTCGTGTTGGAGTTTCATGTTTTACATGACCA
CGCCACCAACGTGTACTCTACTGAACGGTGCTATCGACAGAAGAAAAATT
ATCAAAAATACTTCAGTTCTCTACTATGAAATCGAGGAACAAAACAGCAT
CACATTCATCAGATATTTACACAGAATCAGCAACAACAACAACAACAACA
ACATCAAAATCAGTGAATATAACACCAAGCACAGCTCTTCATTCCACACA
AATCTCCATGACAACGTCAATATCAATGGACCATCAGAAAGCAGCTAGCA
GTTCAACTTCATTAAAAGCAATCGGCCTCGTGATTTTCATATGTTCAGTT
GCATCACTGTTTCTAGAATAGATTTGTGAATGGTTCGTATTACGTCACCA
TTGACAACCAACAAGTCGAAGTGACATCACAAAACGTTCATTACGTCAAC
AATACAGTGTTCATCGACATTAATGGTGAACTAGTACCATTACCGCTAGC
TGTGGTCACTACAAATCATAATGGAATGCTTAGTATCACTGTTGATGGTA
TCTTCATTGGAACTTTGTCAAACGATGGGAACTTTACCATTGCTCCTGAG
CCAATAAAAAGTGTAGAAACCAATGTAATTTAAATGAGAATCTTTGCAAC
CTTGGTACATGTTTCCCACACTTCAATAACGACTCCTATACTTGCCACTG
TCCTCAATCATACACTGGTAACAACTGTCAGGTGCTGGATCAATCTGAAG
CCGGCCAAACCTCTCGAACAACAACTTCAATCCAGGCCTCAACTTCGCAA
ACCACGACGACCTCAATCCAGGCTTCTACACCGCTAACCACAACGACCTC
GATCCAGGCTTCTACTCCGCAAACCACAACGACCTCGATCCAGGCCTCAA
CTTCGCAAACCACGACAACCTCGATCCAGGCTTCTACTCCGCAGACCACA
ACGACCTCGATCCAGGCTTCTACTCGGCAAACCTCAACGACCTCGATCCA
GGCCTCAACTTCGCGAACCACGACAACCTCGATCCAGGCTTCTACTCCGC
AGACCACAACGACCTCGATCCAGGCTTCTACTTCGCAAACCACAACAACC
TCGATCCAGGCCTCAACTTCGCAAACCACAACTTCAATTCTGGCTCCTTC
AGTCAGTAACGACACACCGGACTTTCCCACTGTTTTTCCGGAAATCACGA
CAATCCCAATCCAGGCCTCCTCAACTTCGCAAATCACAACTTCCATCAAG
GCTCCTTCTGCCAGTTACGACGTACCAGACTTTCCCACTGTTGCTCCGTC
TTATGGTTTCCTAGAATCCAGCGCCATTACGCCCTCGAATGTTGCCGAAG
CTAACCCAGCCACTTACACCACATCAACACGCGATAGTTCAGCAACAATA
ACAGCTTCAATCACCAATAATACCAGCTCAACCTCGTCGAATCTCGCAAG
ATGGAACCGTGGAAGCAGTGGTTAGCCTTATTGGTTGTCCATCTAACCTT
TACATACATATCTGGATCGCAAACGAGAAAAACTGAAATCACTAATAAAG
CCGTTTCCGGTACGATATACAAGATTAAACAAAGTTCGTTCCGGAAAGCA
TTATATATCACACCGAACGGTGATAACCATCATTTAAGTAGCCTGGAAAC
GATTGAACAAGATGCTACACCAATGAATTGTGGGAAGGCTTGTCAAGATC
ACACTTCGTGTTGGAGTTTCATGTTTTACATGACCACGCCACCAACGTGT
ACTCTACTGAACGGTGCTATCGACAGAAGAAAAATTATCAAAAATACTTC
AGTTCTCTACTATGAAATCGAGGAACAAAACAGCATCACATTCATCAGAT
ATTTACACAGAATCAGCAACAACAACAACAACAACAACATCAAAATCAGT
GAATATAACACCAAGCACAGCTCTTCATTCCACACAAATCTCCATGACAA
CGTCAATATCAATGGACCATCAGAAAGCAGCTAGCAGTTCAACTTCATTA
AAAGCAATCGGCCTCGTGATTTTCATATGTTCAGTTGCATCACTGTTTCT
AGAATAGATTTGTGAATGGTTCGTATTACGTCACCATTGACAACCAACAA
GTCGAAGTGACATCACAAAACGTTCATTACGTCAACAATACAGTGTTCAT
CGACATTAATGGTGAACTAGTACCATTACCGCTAGCTGTGGTCACTACAA
ATCATAATGGAATGCTTAGTATCACTGTTGATGGTATCTTCATTGGAACT
TTGTCAAACGATGGGAACTTTACCATTGCTCCTGAGCCAATAAAAAGTGT
AGAAACCAATGTAATTTAAATGAGAATCTTTGCAACCTTGGTACATGTTT
CCCACACTTCAATAACGACTCCTATACTTGCCACTGTCCTCAATCATACA
CTGGTAACAACTGTCAGGTGCTGGATCAATCTGAAGCCGGCCAAACCTCT
CGAACAACAACTTCAATCCAGGCCTCAACTTCGCAAACCACGACGACCTC
AATCCAGGCTTCTACACCGCTAACCACAACGACCTCGATCCAGGCTTCTA
CTCCGCAAACCACAACGACCTCGATCCAGGCCTCAACTTCGCAAACCACG
ACAACCTCGATCCAGGCTTCTACTCCGCAGACCACAACGACCTCGATCCA
GGCTTCTACTCGGCAAACCTCAACGACCTCGATCCAGGCCTCAACTTCGC
GAACCACGACAACCTCGATCCAGGCTTCTACTCCGCAGACCACAACGACC
TCGATCCAGGCTTCTACTTCGCAAACCACAACAACCTCGATCCAGGCCTC
AACTTCGCAAACCACAACTTCAATTCTGGCTCCTTCAGTCAGTAACGACA
CACCGGACTTTCCCACTGTTTTTCCGGAAATCACGACAATCCCAATCCAG
GCCTCCTCAACTTCGCAAATCACAACTTCCATCAAGGCTCCTTCTGCCAG
TTACGACGTACCAGACTTTCCCACTGTTGCTCCGTCTTATGGTTTCCTAG
AATCCAGCGCCATTACGCCCTCGAATGTTGCCGAAGCTAACCCAGCCACT
TACACCACATCAACACGCGATAGTTCAGCAACAATAACAGCTTCAATCAC
CAATAATACCAGCTCAACCTCGTCGAATCTCGCAAGATGGAACCGTGGAA
GCAGTGGTTAGCCTTATTGGTTGTCCATCTAACCTTTACATACATATCTG
GATCGCAAACGAGAAAAACTGAAATCACTAATAAAGCCGTTTCCGGTACG
ATATACAAGATTAAACAAAGTTCGTTCCGGAAAGCATTATATATCACACC
GAACGGTGATAACCATCATTTAAGTAGCCTGGAAACGATTGAACAAGATG
CTACACCAATGAATTGTGGGAAGGCTTGTCAAGATCACACTTCGTGTTGG
AGTTTCATGTTTTACATGACCACGCCACCAACGTGTACTCTACTGAACGG
TGCTATCGACAGAAGAAAAATTATCAAAAATACTTCAGTTCTCTACTATG
AAATCGAGGAACAAAACAGCATCACATTCATCAGATATTTACACAGAATC
AGCAACAACAACAACAACAACAACATCAAAATCAGTGAATATAACACCAA
GCACAGCTCTTCATTCCACACAAATCTCCATGACAACGTCAATATCAATG
GACCATCAGAAAGCAGCTAGCAGTTCAACTTCATTAAAAGCAATCGGCCT
CGTGATTTTCATATGTTCAGTTGCATCACTGTTTCTAGAATAGATTTGTG
AATGGTTCGTATTACGTCACCATTGACAACCAACAAGTCGAAGTGACATC
ACAAAACGTTCATTACGTCAACAATACAGTGTTCATCGACATTAATGGTG
AACTAGTACCATTACCGCTAGCTGTGGTCACTACAAATCATAATGGAATG
CTTAGTATCACTGTTGATGGTATCTTCATTGGAACTTTGTCAAACGATGG
GAACTTTACCATTGCTCCTGAGCCAATAAAAAGTGTAGAAACCAATGTAA
TTTAAATGAGAATCTTTGCAACCTTGGTACATGTTTCCCACACTTCAATA
ACGACTCCTATACTTGCCACTGTCCTCAATCATACACTGGTAACAACTGT
CAGGTGCTGGATCAATCTGAAGCCGGCCAAACCTCTCGAACAACAACTTC
AATCCAGGCCTCAACTTCGCAAACCACGACGACCTCAATCCAGGCTTCTA
CACCGCTAACCACAACGACCTCGATCCAGGCTTCTACTCCGCAAACCACA
ACGACCTCGATCCAGGCCTCAACTTCGCAAACCACGACAACCTCGATCCA
GGCTTCTACTCCGCAGACCACAACGACCTCGATCCAGGCTTCTACTCGGC
AAACCTCAACGACCTCGATCCAGGCCTCAACTTCGCGAACCACGACAACC
TCGATCCAGGCTTCTACTCCGCAGACCACAACGACCTCGATCCAGGCTTC
TACTTCGCAAACCACAACAACCTCGATCCAGGCCTCAACTTCGCAAACCA
CAACTTCAATTCTGGCTCCTTCAGTCAGTAACGACACACCGGACTTTCCC
ACTGTTTTTCCGGAAATCACGACAATCCCAATCCAGGCCTCCTCAACTTC
GCAAATCACAACTTCCATCAAGGCTCCTTCTGCCAGTTACGACGTACCAG
ACTTTCCCACTGTTGCTCCGTCTTATGGTTTCCTAGAATCCAGCGCCATT
ACGCCCTCGAATGTTGCCGAAGCTAACCCAGCCACTTACACCACATCAAC
ACGCGATAGTTCAGCAACAATAACAGCTTCAATCACCAATAATACCAGCT
CAACCTCGTCGAATCTCGCAAGATGGAACCGTGGAAGCAGTGGTTAGCCT
TATTGGTTGTCCATCTAACCTTTACATACATATCTGGATCGCAAACGAGA
AAAACTGAAATCACTAATAAAGCCGTTTCCGGTACGATATACAAGATTAA
ACAAAGTTCGTTCCGGAAAGCATTATATATCACACCGAACGGTGATAACC
ATCATTTAAGTAGCCTGGAAACGATTGAACAAGATGCTACACCAATGAAT
TGTGGGAAGGCTTGTCAAGATCACACTTCGTGTTGGAGTTTCATGTTTTA
CATGACCACGCCACCAACGTGTACTCTACTGAACGGTGCTATCGACAGAA
GAAAAATTATCAAAAATACTTCAGTTCTCTACTATGAAATCGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:832728..836656 - |
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