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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000145_pilon:409041..410504+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15916.1.p1 ID=MSTRG.15916.1.p1|Name=MSTRG.15916.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1464bp|location=Sequence derived from alignment at sc0000145_pilon:409041..410504+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaaatgaaactatggcattataattatgaaaaagatttcaatgcTAC
AAAATAGTTTTCTTGTCATACTTATTATCTGCTTGACAATAGTAATAAAA
GGTTTGTATTTCATctatattttcatcttcaaatttcaTCTAACTGTATT
TTCTTCCTGTAAAGTTATCGAATTTCgatgaaaactaatttttacaCATT
TTGTTCACATTCCACCtaattttacaaaagttccCTATTAATCTGCGCTA
TTTTTTCACAAGCAACTCCAATTATTAGGTCAACCCTGGgagcttagcat
tctagctcattttctaaTTATAAGCtttttttGCCATACATACAGCATGC
AAAGTATAACATTTCAATATCATTCTATGATTTTTCTCTCTTCAGAATAT
TATTTACCAAGCTTTATATGGACAAATCAGCAGCACCCTTTGCTAAAAAT
CATCCATCGAAGTCCATTATACCcaaataaactttgtttgagcGGCTACT
ATAAAAATATTCTGCTACTTGTTAATTTTAATCATCCGTTTTACGACAAT
ATCCCAATGATCAGGTCACTTTACGAGCGAGCATTTCCTAATATGGTATT
CTACGGTAcaaaaaaatctcgaaaattcaACGTTCACAAAATCGAGTCAC
ACAAAGGATATTTCAGTTATATTGCTTTGGCAGACGCAatggaaaaatat
acaaatttcaCTGGCTATCTTTTAATCAACGATGACTTATTAATACACCC
GTGGTCACTTTTAAAACttgatcaaaataaaatttgggaAGGACCGAAAT
GGCCAATCGCTGTTGCGAATTTGAGCGCGTTTGACCACTGGTATTGGTGG
AACAGTCGATGGGGTTTAAAGAAATGTCTTTTAGCTCGACAATTAGCAAT
GAcgaaatattcaaatttaataTCAACTTTACACGACCCTGAAAATACAA
CCGATCAAAGATTAGATTGTTATCGCGGACGTGCTGATATATTTTACGTA
CCTAAACACAAATGgaaaactttttccaaactttcaaagatatttcatga
aaataatGTATTCTTAGAGATTGCTGTACCGACTATACTCCGAATGATTT
CGACCAGCTCCGAAAGAGAATTCCTGGACGGGATTTACCTACCCGGGCGA
GTGAACTCTTCCGTTATCCGGGACACCCGGTATCTTTGGAGTCATTACCA
GGATGATTTACATTTTATTCATCCGGTTAAGCTACGATACGGAGATGAAG
GTACTTCTTTGAATCGTTTTGTTTTGGATACTTTTGTAAAGCCAAAATTt
gattcaattttgaattgcaCAAGGAATTAAATTCTATTATTTTATCATGT
TTATAGGTCCGTAATCTACTGCTATCTTTCCAAAAGTTccattcgaaatt
tttttatcagttCATAGGTTGCCCGGAATCTAGGCGATGAAAAGCAATCT
ACTGAATCCgttct Coding sequence (CDS) from alignment at sc0000145_pilon:409041..410504+ >MSTRG.15916.1.p1 ID=MSTRG.15916.1.p1|Name=MSTRG.15916.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2016bp|location=Sequence derived from alignment at sc0000145_pilon:409041..410504+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaaagatttcaatgcTACAAAATAGTTTTCTTGTCATACTTATTAT
CTGCTTGACAATAGTAATAAAAGAATATTATTTACCAAGCTTTATATGGA
CAAATCAGCAGCACCCTTTGCTAAAAATCATCCATCGAAGTCCATTATAC
CcaaataaactttgtttgagcGGCTACTATAAAAATATTCTGCTACTTGT
TAATTTTAATCATCCGTTTTACGACAATATCCCAATGATCAGGTCACTTT
ACGAGCGAGCATTTCCTAATATGGTATTCTACGGTAcaaaaaaatctcga
aaattcaACGTTCACAAAATCGAGTCACACAAAGGATATTTCAGTTATAT
TGCTTTGGCAGACGCAatggaaaaatatacaaatttcaCTGGCTATCTTT
TAATCAACGATGACTTATTAATACACCCGTGGTCACTTTTAAAACttgat
caaaataaaatttgggaAGGACCGAAATGGCCAATCGCTGTTGCGAATTT
GAGCGCGTTTGACCACTGGTATTGGTGGAACAGTCGATGGGGTTTAAAGA
AATGTCTTTTAGCTCGACAATTAGCAATGAcgaaatattcaaatttaata
TCAACTTTACACGACCCTGAAAATACAACCGATCAAAGATTAGATTGTTA
TCGCGGACGTGCTGATATATTTTACGTACCTAAACACAAATGgaaaactt
tttccaaactttcaaagatatttcatgaaaataatGTATTCTTAGAGATT
GCTGTACCGACTATACTCCGAATGATTTCGACCAGCTCCGAAAGAGAATT
CCTGGACGGGATTTACCTACCCGGGCGAGTGAACTCTTCCGTTATCCGGG
ACACCCGGTATCTTTGGAGTCATTACCAGGATGATTTACATTTTATTCAT
CCGGTTAAGCTACGATACGGAGATGAAGGTACTTCTTTGAATCGTTTTGT
TTTGGATACTTTTGTAAAGCCAAAATTtgattcaattttgaattgcaCAA
GGAATTAAatgaaaaagatttcaatgcTACAAAATAGTTTTCTTGTCATA
CTTATTATCTGCTTGACAATAGTAATAAAAGAATATTATTTACCAAGCTT
TATATGGACAAATCAGCAGCACCCTTTGCTAAAAATCATCCATCGAAGTC
CATTATACCcaaataaactttgtttgagcGGCTACTATAAAAATATTCTG
CTACTTGTTAATTTTAATCATCCGTTTTACGACAATATCCCAATGATCAG
GTCACTTTACGAGCGAGCATTTCCTAATATGGTATTCTACGGTAcaaaaa
aatctcgaaaattcaACGTTCACAAAATCGAGTCACACAAAGGATATTTC
AGTTATATTGCTTTGGCAGACGCAatggaaaaatatacaaatttcaCTGG
CTATCTTTTAATCAACGATGACTTATTAATACACCCGTGGTCACTTTTAA
AACttgatcaaaataaaatttgggaAGGACCGAAATGGCCAATCGCTGTT
GCGAATTTGAGCGCGTTTGACCACTGGTATTGGTGGAACAGTCGATGGGG
TTTAAAGAAATGTCTTTTAGCTCGACAATTAGCAATGAcgaaatattcaa
atttaataTCAACTTTACACGACCCTGAAAATACAACCGATCAAAGATTA
GATTGTTATCGCGGACGTGCTGATATATTTTACGTACCTAAACACAAATG
gaaaactttttccaaactttcaaagatatttcatgaaaataatGTATTCT
TAGAGATTGCTGTACCGACTATACTCCGAATGATTTCGACCAGCTCCGAA
AGAGAATTCCTGGACGGGATTTACCTACCCGGGCGAGTGAACTCTTCCGT
TATCCGGGACACCCGGTATCTTTGGAGTCATTACCAGGATGATTTACATT
TTATTCATCCGGTTAAGCTACGATACGGAGATGAAGGTACTTCTTTGAAT
CGTTTTGTTTTGGATACTTTTGTAAAGCCAAAATTtgattcaattttgaa
ttgcaCAAGGAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145_pilon | genome | sc0000145_pilon:409041..410504 + |
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