MSTRG.15910.1.p1 (mRNA) -

Overview
NameMSTRG.15910.1.p1
Unique NameMSTRG.15910.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000145_pilon:315924..320770-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15910.1.p1 ID=MSTRG.15910.1.p1|Name=MSTRG.15910.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4847bp|location=Sequence derived from alignment at sc0000145_pilon:315924..320770- (Clytia hemisphaerica_ch_hm2_pilon)
TCAATCATTATACACAGAAAGAGTAAAGTTTTTGACAGCTCAAGGTGAGC
ATTCTCTTCAACTTCTTAATCTATTTTAATTGACAAACTATTTAGCATGA
GAGTACATATAATATGTCCATGGGTGGGTGGGGGATGGGTACTTGGGCAA
AAAGGGGTACGGGATGTACCGCTGGCCAGGATACCTTTTTTCACCTCCCT
GAGTCCCAGTTAGGGTCGTAAAAACACCAAAATAGAAAAATAAGTCCCTC
GTAGAGTATGGGGGGGGGTTTGAAATACAGAAAATTTTGAAAACATTTTG
GAATTTCAGTCCCATTCAGGGTCACTTCTTTCGGGGTCACTTTTAAAACG
GAGTCCCACGTAGGGTCCATTTTTCGAGCTTCAGTGGCACACCCCGTCGG
TCGGCCAGGGTAATACCCCCCCGGACAGATATGTACAGTAGTTTCAACAA
ATTCCTCTGGACTTTTGAATTACAAAAATTGACCCATGACTAATTTGATC
ATTTGGCAAAATCTCAAATACCTATTTATTTATTTTTTAGTGTGGAGGAT
GACTCGGTTTGTACTGTTATTAATTGTGATTGGGTTTTCATGGAAATCTG
TTACCATGGATACAGATATTTATGACGAGCAAGAAGTGGAAAAAGAGAAA
GGTCTGGAATGGGAAGCGGCAGGGATGTGTGCTTCTATTGCTGGATGTAA
AACAAAACACCATGCATGCTTTCTGATGGTAAATGGGCCATTCCATTTTA
TATCCAAACAGGGGGGTTGACAAACATTTCCAGGGGGTATAAAAAAGATT
TTTTCATTTTTACAGGGGCTAAAAGGTTACTTTAGGCGTACAAACTTTCG
CGAGCAGAAACTTTTGCGAGGACGAAAAATAGTGAAATTCACGACATTTA
CTTTTGCGAATTAAAGGGAAAAATATTTTTCGGGAGCATAAACTTTCGCG
AATCAAGACGTAAAATTGAGAATTTTCACATGAAAAAATGGCTTAGAGGG
ACAAATACTTCTTGGATTGGCTTGAAACATTTGTCCTTTCACCGTCCAAA
ACCCCCTACAGATTCATTCCTCTTTGGTTTTCAAGGGAATTTACTACATA
TGGTTTTAAAGAACGACAAATTACGCATGCGTGTTACAATGCAGGATTCT
TTAGAGGAACAGACTGGGTACTTGCTGGCCCCTTCTGACCCCTTTTCATA
ACGTTATGAAGTGTCACAATTCTAATTTTTTGTTAAAAAAATAGTTTATC
CTAAGATCTGTGAAATACTCTTTGCCTGTTGATATGATATAGAAAATTGC
CAAAAGTCGTTACTCGTAAAATAATTGCTTTATCGAGATTTCTAAGCCAA
TCAAAATACTAGTACAGAAAACTGTGCTAGGTCATAGCGTCAGCCTGTTA
GCTATAGGGTTACACCCTCAAAAAAGCCCAAGAAAAGGTGGGGGCTAAAG
ATGTTTCAAATATTTGGGGTGACCTAATGTACTTGGGGGGGGAGCTGAAA
TCTCATCATTTAACGCAGGGGCTGAATACTTCATCTTAATGCTTGGCTTC
AATTACTCAAATTAAAGCCCATGAAGCTGAAAAGTTTTCCCTTGCGGCGC
AGTATTTTTATATAAAATGAGCAAAATATTTTATCTTAACCTTCGAACTG
CAACACAATTTACATTGAATAGCCCTTTTTTTGTGGGACAAACTTTTAAA
AGGGTCGAAAACTCTGGGGACTACCAAAAATTTCATGAATCTTTGGGGGA
ACTTAATTGGCAACAACCATGAACTGTTATAGTCATGGTCCGTCAAAAGA
ATATTAAAAACTTGGCCCCGCCACCTTCAGGCAGTATTAGAGAGAAAATA
TTTTTGTCCGATATTCTGTGTCTTGAACAAAAAATGAGATAAATTTTAAT
TTTTTTCTTGTTATTTTAGGACGGAAGATGTCGGGAATTGTGTTACCCAG
ATGGACCAGTCAACGCGCGTAATATTATGAGAGCAGATTTCTATACCTAC
AACGAGAATACCATCAAAGATTATCCAGCAGGTAATAGCGAGTTTATTAT
GTTTTGTTTCATGTAGCGGAGACGGTTAGTTTTTGATTTTCTAGATCCTA
ACTGACTGAGAAATATGATAGAGTAAAGCTTTTATCAGCCCTAGATTTTG
CACCTCAAAGATGTGAGTTTTTCAAAATCGTTTCAGTCACTCTTCCATCT
TCAAAATGGGTAGATACATAAACTTGATGATCTAAACATAACTAGGGCTC
ACTTCAACCTTTTCGAGGCGCTACGTAGCCTGAATGAATGTATAGTAGAA
CTAACTCGAACCTCTACAGGGTGTCCGGAAAAAAGTATCGAGTTCAAACA
TGATTCTGAGTAGAAGGTTGTTGCGTGTGTTTAACAAAATGTAAGAAAGT
ATCTACCAACACAATAATTGTTTTTACAACGGTCATTATGATTAAAAAGA
ATTAACTAACTTTCTTTACAATTTTCATGGCGTTAAAGTTATTGAGAATT
GTTTTTTGTAAAAGCTATTCATAAAAGATGTCCCATGACAATTAAATATG
ACATAGAGAGAAACTTTGATAAACATTGCAAATTTAGTGTGAAAACACAC
ACAAGAACTTTCTTTCTATAGAAGTGGTACGACTCGATACTTTTTTTCCG
GACACCCTGTATAGTGGAGTTATAATTGTATGATAACTATATCTATAACT
CCATAGTCATTATAAAAAACCCCGGTCTGGCAATGTATTGTTTTAGCTTT
TTGTTCAATTTTCTTTTGTTACAAACAAAAGACAAGTTGCGATTTGCATA
CTTGTTGATCACGTTATCAAAATCTCCTCTTTGGGATTGGTCTATTTTCT
AATCACATGATCAAAATGTTTGCAAAATATGTCGATTTTGGTACGTAAGC
TCTATCTTTTAACAATAAAAAGAGACAAAAGCCGTCAGACCAGTGTTTTT
ATAATGACTATGATAGCTCGAATATCTTCTTAACTCGAACACGTTTTGTA
GTCCCTTCAATTAACAATGCCTAAAAAACCTTATTCCATAACTCAAAATT
GCCTTAACTCGAACAAATTCGAGTTCCCCTTGCGTGTTTGAGTTATGGAA
ATTCCGCTGAGCTACCTAATGTTGCAATTATCTTTGGTAAATCCAGACGG
GAAATTCAAAATTAGAGGAAACGCTTAAGAAATTGTTTTCTTCCAATGCT
TGCAATAGACCTTTTCATAAATTACGTCACGAACATCCCTTGCCTCGTTT
TGAAATTATTGCCATGGTGATTAACTCCCAGCGGATTTAATCAAAACTAC
TTCCTATTCATAAAAGAATCATTTAATGTCCCAAGGGAGACAATCACTAT
GGTAATTGTTTGAATACAAGGCAAGTGATGTTCATAACGTATTCATATCA
TATTATACTATTGGGACGGAAATGTAAGTTAAAAATCTCAGATAGCATAT
TTTTGCTTTCCAGGAAGTCCTATTAAGGAGATGTACGACAACATGATCTT
GAAAGGAACAAGTGTAGCCGATTTGTATCAAGGAAATGTGTTCAAACGAA
ATAATGTACCCGTCACTCAAGGTTTAAAAAGCAAGTATAACCACAAGTTT
TGTAACGCGGCATGTGTGACCACACTTCGAGGAGGTTGCAGAGCTATGGG
TGTGTTTAAGAATGCTCATGATTGGTGTTTAACAGCTCTGGCATGGTTGG
ATGATATTGAAAACCTTGAAGGTCCCTCTTCATATGTTTTGAAATTGGTT
GCCGATTTGATTCGAGATTCTACGAATAGTTTAGATTCTATGCAAGGGGT
TTTGGTCGCTTCCGCAGCTAGTTCCGCCATGTTGACTTCAGACTGGTGGG
AGAATGGTAACAAGTTGTTTGGAAACGAATTTGGGTTTGCCGTACAGCAT
TCTCTATGGTTAGCGATTTTTGCTGGCCGCATTCGATTCACGCTTCAACC
AAAAGTACCTGATCAACCAAACATCGGAACCACAATGCTTTGCGATGTTC
AAGAAGCTGAGAATTTCGAATTGGATTCTGGGTCAGTCTACGCGAGTATT
TGCACCTTCCTAGATGCGAATGAACACATGCGTTTCAGACCTGAAATTCA
TACGAGGAATTCGATTGGCTGTGTTGAAAAAACAACCGGTATGGCATTTA
TACGGGTGGGAGATTGGGCAAAACCGACGGCAACCGCAACCTGTATTGGA
GGGGAGTTAAACAAACACGGTATCGCTTTCCAAGATTCCATGAAGCTGAT
CACTGTTGAGATTACCACTCGAGGTGTAATACTTTTCCCACCATCCATTA
AAGAGAGTTTGAAGTCCATGACAACAACGCAATGCACCACGGCGAAAGGG
AATGGGCCGAATGAGAATGGCATTCTGGGTAAATGTGGATTACAAACTGT
AGGTGGCATTTGTAATTGGTTTGCCGTATGGTAGCGAAAAGCAAAAAAAA
CAAAAGACGTTTCAAAATTGTGTAATACTTAAAAATAAAATAATACAGCA
TCACCGGGGAATAGGGTTAGTGTCCGCTAATTAGAAGTGTCCGCCTTTTA
GAAACTTTTCAATTCTGTACTCTAATTTTGGTATAAGGTACTATTAAGGA
ATTAAGTATGTAAAATTTTGGTTTAAAGTGCTTTTCTAGAGACACTAGGA
CATGGAAGAACAAGAGAATGATTATTCAAACAAACGCATTAATTTACTTT
TTATAAATCATAGTAGTCTTGAGGACCCTGTAAATTTATCATTTTTATGG
CATAAGCAAATTCACCGACTGAATAAAGGGATCGCTACAAACGTCTATAA
GCAATTTGTTCAGTGAAACTTTGATGTGTTTGAGAAATAAATTGTTT

Coding sequence (CDS) from alignment at sc0000145_pilon:315924..320770-

>MSTRG.15910.1.p1 ID=MSTRG.15910.1.p1|Name=MSTRG.15910.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5256bp|location=Sequence derived from alignment at sc0000145_pilon:315924..320770- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGTCCTATTAAGGAGATGTACGACAACATGATCTTGAAAGGAACAAGT
GTAGCCGATTTGTATCAAGGAAATGTGTTCAAACGAAATAATGTACCCGT
CACTCAAGGTTTAAAAAGCAAGTATAACCACAAGTTTTGTAACGCGGCAT
GTGTGACCACACTTCGAGGAGGTTGCAGAGCTATGGGTGTGTTTAAGAAT
GCTCATGATTGGTGTTTAACAGCTCTGGCATGGTTGGATGATATTGAAAA
CCTTGAAGGTCCCTCTTCATATGTTTTGAAATTGGTTGCCGATTTGATTC
GAGATTCTACGAATAGTTTAGATTCTATGCAAGGGGTTTTGGTCGCTTCC
GCAGCTAGTTCCGCCATGTTGACTTCAGACTGGTGGGAGAATGGTAACAA
GTTGTTTGGAAACGAATTTGGGTTTGCCGTACAGCATTCTCTATGGTTAG
CGATTTTTGCTGGCCGCATTCGATTCACGCTTCAACCAAAAGTACCTGAT
CAACCAAACATCGGAACCACAATGCTTTGCGATGTTCAAGAAGCTGAGAA
TTTCGAATTGGATTCTGGGTCAGTCTACGCGAGTATTTGCACCTTCCTAG
ATGCGAATGAACACATGCGTTTCAGACCTGAAATTCATACGAGGAATTCG
ATTGGCTGTGTTGAAAAAACAACCGGTATGGCATTTATACGGGTGGGAGA
TTGGGCAAAACCGACGGCAACCGCAACCTGTATTGGAGGGGAGTTAAACA
AACACGGTATCGCTTTCCAAGATTCCATGAAGCTGATCACTGTTGAGATT
ACCACTCGAGGTGTAATACTTTTCCCACCATCCATTAAAGAGAGTTTGAA
GTCCATGACAACAACGCAATGCACCACGGCGAAAGGGAATGGGCCGAATG
AGAATGGCATTCTGGGTAAATGTGGATTACAAACTGTAGGTGGCATTTGT
AATTGGTTTGCCGTATGGTAGGACGGAAGATGTCGGGAATTGTGTTACCC
AGATGGACCAGTCAACGCGCGTAATATTATGAGAGCAGATTTCTATACCT
ACAACGAGAATACCATCAAAGATTATCCAGCAGTGTGGAGGATGACTCGG
TTTGTACTGTTATTAATTGTGATTGGGTTTTCATGGAAATCTGTTACCAT
GGATACAGATATTTATGACGAGCAAGAAGTGGAAAAAGAGAAAGGTCTGG
AATGGGAAGCGGCAGGGATGTGTGCTTCTATTGCTGGATGTAAAACAAAA
CACCATGCATGCTTTCTGATGCAATCATTATACACAGAAAGAGTAAAGTT
TTTGACAGCTCAAGGAAGTCCTATTAAGGAGATGTACGACAACATGATCT
TGAAAGGAACAAGTGTAGCCGATTTGTATCAAGGAAATGTGTTCAAACGA
AATAATGTACCCGTCACTCAAGGTTTAAAAAGCAAGTATAACCACAAGTT
TTGTAACGCGGCATGTGTGACCACACTTCGAGGAGGTTGCAGAGCTATGG
GTGTGTTTAAGAATGCTCATGATTGGTGTTTAACAGCTCTGGCATGGTTG
GATGATATTGAAAACCTTGAAGGTCCCTCTTCATATGTTTTGAAATTGGT
TGCCGATTTGATTCGAGATTCTACGAATAGTTTAGATTCTATGCAAGGGG
TTTTGGTCGCTTCCGCAGCTAGTTCCGCCATGTTGACTTCAGACTGGTGG
GAGAATGGTAACAAGTTGTTTGGAAACGAATTTGGGTTTGCCGTACAGCA
TTCTCTATGGTTAGCGATTTTTGCTGGCCGCATTCGATTCACGCTTCAAC
CAAAAGTACCTGATCAACCAAACATCGGAACCACAATGCTTTGCGATGTT
CAAGAAGCTGAGAATTTCGAATTGGATTCTGGGTCAGTCTACGCGAGTAT
TTGCACCTTCCTAGATGCGAATGAACACATGCGTTTCAGACCTGAAATTC
ATACGAGGAATTCGATTGGCTGTGTTGAAAAAACAACCGGTATGGCATTT
ATACGGGTGGGAGATTGGGCAAAACCGACGGCAACCGCAACCTGTATTGG
AGGGGAGTTAAACAAACACGGTATCGCTTTCCAAGATTCCATGAAGCTGA
TCACTGTTGAGATTACCACTCGAGGTGTAATACTTTTCCCACCATCCATT
AAAGAGAGTTTGAAGTCCATGACAACAACGCAATGCACCACGGCGAAAGG
GAATGGGCCGAATGAGAATGGCATTCTGGGTAAATGTGGATTACAAACTG
TAGGTGGCATTTGTAATTGGTTTGCCGTATGGTAGGACGGAAGATGTCGG
GAATTGTGTTACCCAGATGGACCAGTCAACGCGCGTAATATTATGAGAGC
AGATTTCTATACCTACAACGAGAATACCATCAAAGATTATCCAGCAGTGT
GGAGGATGACTCGGTTTGTACTGTTATTAATTGTGATTGGGTTTTCATGG
AAATCTGTTACCATGGATACAGATATTTATGACGAGCAAGAAGTGGAAAA
AGAGAAAGGTCTGGAATGGGAAGCGGCAGGGATGTGTGCTTCTATTGCTG
GATGTAAAACAAAACACCATGCATGCTTTCTGATGCAATCATTATACACA
GAAAGAGTAAAGTTTTTGACAGCTCAAGGAAGTCCTATTAAGGAGATGTA
CGACAACATGATCTTGAAAGGAACAAGTGTAGCCGATTTGTATCAAGGAA
ATGTGTTCAAACGAAATAATGTACCCGTCACTCAAGGTTTAAAAAGCAAG
TATAACCACAAGTTTTGTAACGCGGCATGTGTGACCACACTTCGAGGAGG
TTGCAGAGCTATGGGTGTGTTTAAGAATGCTCATGATTGGTGTTTAACAG
CTCTGGCATGGTTGGATGATATTGAAAACCTTGAAGGTCCCTCTTCATAT
GTTTTGAAATTGGTTGCCGATTTGATTCGAGATTCTACGAATAGTTTAGA
TTCTATGCAAGGGGTTTTGGTCGCTTCCGCAGCTAGTTCCGCCATGTTGA
CTTCAGACTGGTGGGAGAATGGTAACAAGTTGTTTGGAAACGAATTTGGG
TTTGCCGTACAGCATTCTCTATGGTTAGCGATTTTTGCTGGCCGCATTCG
ATTCACGCTTCAACCAAAAGTACCTGATCAACCAAACATCGGAACCACAA
TGCTTTGCGATGTTCAAGAAGCTGAGAATTTCGAATTGGATTCTGGGTCA
GTCTACGCGAGTATTTGCACCTTCCTAGATGCGAATGAACACATGCGTTT
CAGACCTGAAATTCATACGAGGAATTCGATTGGCTGTGTTGAAAAAACAA
CCGGTATGGCATTTATACGGGTGGGAGATTGGGCAAAACCGACGGCAACC
GCAACCTGTATTGGAGGGGAGTTAAACAAACACGGTATCGCTTTCCAAGA
TTCCATGAAGCTGATCACTGTTGAGATTACCACTCGAGGTGTAATACTTT
TCCCACCATCCATTAAAGAGAGTTTGAAGTCCATGACAACAACGCAATGC
ACCACGGCGAAAGGGAATGGGCCGAATGAGAATGGCATTCTGGGTAAATG
TGGATTACAAACTGTAGGTGGCATTTGTAATTGGTTTGCCGTATGGTAGG
ACGGAAGATGTCGGGAATTGTGTTACCCAGATGGACCAGTCAACGCGCGT
AATATTATGAGAGCAGATTTCTATACCTACAACGAGAATACCATCAAAGA
TTATCCAGCAGTGTGGAGGATGACTCGGTTTGTACTGTTATTAATTGTGA
TTGGGTTTTCATGGAAATCTGTTACCATGGATACAGATATTTATGACGAG
CAAGAAGTGGAAAAAGAGAAAGGTCTGGAATGGGAAGCGGCAGGGATGTG
TGCTTCTATTGCTGGATGTAAAACAAAACACCATGCATGCTTTCTGATGC
AATCATTATACACAGAAAGAGTAAAGTTTTTGACAGCTCAAGGAAGTCCT
ATTAAGGAGATGTACGACAACATGATCTTGAAAGGAACAAGTGTAGCCGA
TTTGTATCAAGGAAATGTGTTCAAACGAAATAATGTACCCGTCACTCAAG
GTTTAAAAAGCAAGTATAACCACAAGTTTTGTAACGCGGCATGTGTGACC
ACACTTCGAGGAGGTTGCAGAGCTATGGGTGTGTTTAAGAATGCTCATGA
TTGGTGTTTAACAGCTCTGGCATGGTTGGATGATATTGAAAACCTTGAAG
GTCCCTCTTCATATGTTTTGAAATTGGTTGCCGATTTGATTCGAGATTCT
ACGAATAGTTTAGATTCTATGCAAGGGGTTTTGGTCGCTTCCGCAGCTAG
TTCCGCCATGTTGACTTCAGACTGGTGGGAGAATGGTAACAAGTTGTTTG
GAAACGAATTTGGGTTTGCCGTACAGCATTCTCTATGGTTAGCGATTTTT
GCTGGCCGCATTCGATTCACGCTTCAACCAAAAGTACCTGATCAACCAAA
CATCGGAACCACAATGCTTTGCGATGTTCAAGAAGCTGAGAATTTCGAAT
TGGATTCTGGGTCAGTCTACGCGAGTATTTGCACCTTCCTAGATGCGAAT
GAACACATGCGTTTCAGACCTGAAATTCATACGAGGAATTCGATTGGCTG
TGTTGAAAAAACAACCGGTATGGCATTTATACGGGTGGGAGATTGGGCAA
AACCGACGGCAACCGCAACCTGTATTGGAGGGGAGTTAAACAAACACGGT
ATCGCTTTCCAAGATTCCATGAAGCTGATCACTGTTGAGATTACCACTCG
AGGTGTAATACTTTTCCCACCATCCATTAAAGAGAGTTTGAAGTCCATGA
CAACAACGCAATGCACCACGGCGAAAGGGAATGGGCCGAATGAGAATGGC
ATTCTGGGTAAATGTGGATTACAAACTGTAGGTGGCATTTGTAATTGGTT
TGCCGTATGGTAGGACGGAAGATGTCGGGAATTGTGTTACCCAGATGGAC
CAGTCAACGCGCGTAATATTATGAGAGCAGATTTCTATACCTACAACGAG
AATACCATCAAAGATTATCCAGCAGTGTGGAGGATGACTCGGTTTGTACT
GTTATTAATTGTGATTGGGTTTTCATGGAAATCTGTTACCATGGATACAG
ATATTTATGACGAGCAAGAAGTGGAAAAAGAGAAAGGTCTGGAATGGGAA
GCGGCAGGGATGTGTGCTTCTATTGCTGGATGTAAAACAAAACACCATGC
ATGCTTTCTGATGCAATCATTATACACAGAAAGAGTAAAGTTTTTGACAG
CTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15910MSTRG.15910Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15910.1.p1MSTRG.15910.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15910.1.p1.exon4MSTRG.15910.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15910.1.p1.exon3MSTRG.15910.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15910.1.p1.exon2MSTRG.15910.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15910.1.p1.exon1MSTRG.15910.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145_pilongenomesc0000145_pilon:315924..320770 -