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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:220210..223132- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15842.1.p1 ID=MSTRG.15842.1.p1|Name=MSTRG.15842.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2923bp|location=Sequence derived from alignment at sc0000144_pilon:220210..223132- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAAGTCATTCATTTTATGCAAAGTTGAGTCAATTTTTTTTCTGCTTA
CTAAACGTCTGTCCCAAGTTTGGGCAGTGCAGATGAGAGTGTTGGAGGAC
AGTTTGATTGAAACAGAAAGACATCAAGTGTTAGAATCGTAGTCTTTTTC
TTCGAATCGGTGAGTTTAAGAATTCAATTCGCTTTATATTTAAGATCGTG
TAATCTAAAATGTATAATGGAGCGATGACGAAGTTTCCTTTGCTCTTTAT
ATTTTTTGCTTTGATCATTTTTTTATTTTCTTGCACTAGCCTGCCTTCTG
TAAAAGTTTTTTTTCTTTTCAGTTGTGATGGCAAGCTATTCACCGAATCA
AGTTGATATCCTTTCAACAATCCACTGTTGTTTCAATTGGGATTTCATGA
ACATGAACAAGGAGCAAAAAACAGAACTTTGGTTGCAAGATCGCATCGCA
ACAATCGAAGGAGAATTAAACGCTCAATCAGAAGACAGCCCAAAACGAAA
TTTCCCTCAACTTTATTCACTACAAGGCTTTCTTTACACGCAGTTGTATT
TGAAGAAGGAGAGCAATGGAGCTGAATACCTACAGAAAGCTGAAAAGGCT
TTTCAAAATGCACTCGATGCATGTGAGAAAGAGAGCTGTGGTTACCGAGC
TATAGCGTATGGGAATCTGATTTATTTCAACCATAAAAAATGGAGCAAAA
ATAAATCTGAAGACCCTCAGTACCAAACGCAACAAATACAATGTGAATAC
AACGAGATTAAAAAGATAACAAACATTCCAAAAAATCCAGAAGTTTTAGC
CATGCAGGGGTACTCAGCCAACTATTTTCGGATGCATAACGAATCGATCA
ACTTCTATCAAGAGGCTTTAAAATCGAAAGAAACTGCCGAATGGGTCTTC
GGTTTAGCTCTTGTTAAGTTGCATGGATCAGCTGGTATGGAAAGAACGAG
ACAGGAAAATGACGAAATAGAAACTTTACTAAGACATGCAGTTGAATTGG
ACCCAACTTATCATTTCGTGGGATTGAAATTAGCAAGACATTTGCTTAAA
CAAAGAAAGCCACATGGGACAGAGGAGGTGGTAGCTATCCTCGAGCAAGT
TCCTTTGGATAAAGATAAACAGAGAAATATAATTGTCTTAGAAGAAGCAG
CTGGATTATACACAGACATAGGAAGAGATGATAAAGCATTAGAACTTTAT
AATATAGCTGAAACTATAAATCCAAGTTCAATGAAAACACTACGCGGATT
AGGAAATATCTATCAACAAAAATGGGTAAACAGTTGTTGGAAGAAGAAGG
GAGCTCCTAGACGACTTGATGAAGCGAGTCTAAAGAATGCTGTCAAATAC
TTTACAGAAAACGTAGATTCAGATAATGCAAAGCCATTCGATATTACGAA
AATAGCAAATATTCACCTAAGAGCTTACAAAACCTTTAACGAAGAAGCAT
CCAAAAAAGGCGGAAAACAAGCAGAGAAAAACCTCTATCGAAACAAAGCA
GATCATCATAAAAAGGAATGCACCTTTTGGTATAAGAAGGCCGAGGAGCG
TCTCAACAAAAACCAATTCGATTTAAGGAGTGAAATCGAAGTTTGTTACC
GACTCTCTGAATACTACCGAGAATTTGATTCCGAAGAAGTGGAGAAATAT
TTGGAAGAAACCTTTCGGAAAGCTAGCTTAGGTACCGACCAGGATAACTT
TTATGAGTTGAAATTTGTTAAAAATGCACGTGAAGAGCTTTTACAGTTGG
CCTCTAAAGAAAAAGGTGACCAAGTGAAAGTCTTAAAAACAAAAGCATGG
ATCTATGAGCTGAGTGGTCATTATGAAAGTGCACTATTTTACTTACAAAA
AGTTAAAATCTCAAGCAATACAGATGCCCTTCAAGAGCGTGAATTATCCT
TGTACTTCAAGATCATTAAAAACAAGCGAAGAATTGGTCTGGATGTTCAG
AAAATCAAGAAAGAAATGGACCAGCTTATTCCAAAGATCTCTGATTTTCA
CAATAAAAAGGAATTCGAACTTAAAAGTCGAATAATTGAGATTGAAACAA
AATTTTCGGATGACAATATAACGGAGTTAAAGGAAAACTTTATCCAGTTT
GAAAAAATGATTATTGAATCGAAATTTACAGCAACTGAACTAGCGGATAA
AATTGTAAGTATTTTCCATGACAGTAAAGTTGTTTTAGAACGTACAATGA
AATACATCAAGGAAAACTTGTACCATCCAGAAGGCAAGGATATTCTTTAC
TATCCTAACCAGAAGGTTTCTCAAACGAAGGAAGATTTGAAGAAATTTTT
CGAGAAGGATTGCAAGTGGGAGGATTTTAGTACCAGATACACTCAAATGT
TCCTTTTTTTTGTCGAAAAGCTTAATCCCAACGACTATTCTTATGTTGGA
GATTATGTGAAAGTACGAAACAAAGGAGAACATGATTTAAAGAAAGTGCA
GCTTCAATTATTGGATCAGAAATGTCCGACTAAACAAGACAAAATTGAAT
TAACGAGAAAATCTGCTTTCTATTCAGCAGAGGTTTTCAATTTCATTAAA
AAGGAGGTTGATGGAATACTGTAGTTCATCATTAAAAACAACGAATGCCA
TTTATTTCAAAGAAATATTAGTATTTAATTTCAATGAAGATAAGCTTATA
TATTTGTTAATTTATAAAATAGTTTTTGTTATTTCCTTATTTTTTTCTTT
TGCAGTCCTATCACTATATTGCTTATAATATATTTGTCAAACATGACATT
TTTCATATCGAACTTTACGGCTCTTCCTGTTGTCTTTACACAAACCCAGT
CAGTACCTACGGCTTATTTCAAAATTCATTACCGTACCACGAAGCGATAA
ACGTGAGATACACTCTGGTACAGAGTACTCTTCCTGCATTAGAAAATTTG
TTTACCGTCATAATACAATGCCG Coding sequence (CDS) from alignment at sc0000144_pilon:220210..223132- >MSTRG.15842.1.p1 ID=MSTRG.15842.1.p1|Name=MSTRG.15842.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2247bp|location=Sequence derived from alignment at sc0000144_pilon:220210..223132- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGCTATTCACCGAATCAAGTTGATATCCTTTCAACAATCCACTG
TTGTTTCAATTGGGATTTCATGAACATGAACAAGGAGCAAAAAACAGAAC
TTTGGTTGCAAGATCGCATCGCAACAATCGAAGGAGAATTAAACGCTCAA
TCAGAAGACAGCCCAAAACGAAATTTCCCTCAACTTTATTCACTACAAGG
CTTTCTTTACACGCAGTTGTATTTGAAGAAGGAGAGCAATGGAGCTGAAT
ACCTACAGAAAGCTGAAAAGGCTTTTCAAAATGCACTCGATGCATGTGAG
AAAGAGAGCTGTGGTTACCGAGCTATAGCGTATGGGAATCTGATTTATTT
CAACCATAAAAAATGGAGCAAAAATAAATCTGAAGACCCTCAGTACCAAA
CGCAACAAATACAATGTGAATACAACGAGATTAAAAAGATAACAAACATT
CCAAAAAATCCAGAAGTTTTAGCCATGCAGGGGTACTCAGCCAACTATTT
TCGGATGCATAACGAATCGATCAACTTCTATCAAGAGGCTTTAAAATCGA
AAGAAACTGCCGAATGGGTCTTCGGTTTAGCTCTTGTTAAGTTGCATGGA
TCAGCTGGTATGGAAAGAACGAGACAGGAAAATGACGAAATAGAAACTTT
ACTAAGACATGCAGTTGAATTGGACCCAACTTATCATTTCGTGGGATTGA
AATTAGCAAGACATTTGCTTAAACAAAGAAAGCCACATGGGACAGAGGAG
GTGGTAGCTATCCTCGAGCAAGTTCCTTTGGATAAAGATAAACAGAGAAA
TATAATTGTCTTAGAAGAAGCAGCTGGATTATACACAGACATAGGAAGAG
ATGATAAAGCATTAGAACTTTATAATATAGCTGAAACTATAAATCCAAGT
TCAATGAAAACACTACGCGGATTAGGAAATATCTATCAACAAAAATGGGT
AAACAGTTGTTGGAAGAAGAAGGGAGCTCCTAGACGACTTGATGAAGCGA
GTCTAAAGAATGCTGTCAAATACTTTACAGAAAACGTAGATTCAGATAAT
GCAAAGCCATTCGATATTACGAAAATAGCAAATATTCACCTAAGAGCTTA
CAAAACCTTTAACGAAGAAGCATCCAAAAAAGGCGGAAAACAAGCAGAGA
AAAACCTCTATCGAAACAAAGCAGATCATCATAAAAAGGAATGCACCTTT
TGGTATAAGAAGGCCGAGGAGCGTCTCAACAAAAACCAATTCGATTTAAG
GAGTGAAATCGAAGTTTGTTACCGACTCTCTGAATACTACCGAGAATTTG
ATTCCGAAGAAGTGGAGAAATATTTGGAAGAAACCTTTCGGAAAGCTAGC
TTAGGTACCGACCAGGATAACTTTTATGAGTTGAAATTTGTTAAAAATGC
ACGTGAAGAGCTTTTACAGTTGGCCTCTAAAGAAAAAGGTGACCAAGTGA
AAGTCTTAAAAACAAAAGCATGGATCTATGAGCTGAGTGGTCATTATGAA
AGTGCACTATTTTACTTACAAAAAGTTAAAATCTCAAGCAATACAGATGC
CCTTCAAGAGCGTGAATTATCCTTGTACTTCAAGATCATTAAAAACAAGC
GAAGAATTGGTCTGGATGTTCAGAAAATCAAGAAAGAAATGGACCAGCTT
ATTCCAAAGATCTCTGATTTTCACAATAAAAAGGAATTCGAACTTAAAAG
TCGAATAATTGAGATTGAAACAAAATTTTCGGATGACAATATAACGGAGT
TAAAGGAAAACTTTATCCAGTTTGAAAAAATGATTATTGAATCGAAATTT
ACAGCAACTGAACTAGCGGATAAAATTGTAAGTATTTTCCATGACAGTAA
AGTTGTTTTAGAACGTACAATGAAATACATCAAGGAAAACTTGTACCATC
CAGAAGGCAAGGATATTCTTTACTATCCTAACCAGAAGGTTTCTCAAACG
AAGGAAGATTTGAAGAAATTTTTCGAGAAGGATTGCAAGTGGGAGGATTT
TAGTACCAGATACACTCAAATGTTCCTTTTTTTTGTCGAAAAGCTTAATC
CCAACGACTATTCTTATGTTGGAGATTATGTGAAAGTACGAAACAAAGGA
GAACATGATTTAAAGAAAGTGCAGCTTCAATTATTGGATCAGAAATGTCC
GACTAAACAAGACAAAATTGAATTAACGAGAAAATCTGCTTTCTATTCAG
CAGAGGTTTTCAATTTCATTAAAAAGGAGGTTGATGGAATACTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000144_pilon | genome | sc0000144_pilon:220210..223132 - |
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