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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000144_pilon:214716..217307- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15841.2.p1 ID=MSTRG.15841.2.p1|Name=MSTRG.15841.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2592bp|location=Sequence derived from alignment at sc0000144_pilon:214716..217307- (Clytia hemisphaerica_ch_hm2_pilon)
TTGAATTTAAATACAATCAAAACTTATAAGGAGTTCACCTTGACCGTCGA
TAGTATTTCAAAAACGATAAAAACATTCGATATGGCTTTCATGCCTATAA
ATCCTTTATTTCTGTTATTTCTGGGTGCGGTTTCTTTTATATTGGTTGAT
CACGGAATAACTTATCAAAAGAAGACACTTGGCTCTTTTGCTTATGGCCA
GAACCTCACTGTAGGAATTACGGTAAGTAAAAAAGGAGCGAAAAAGAAAT
TGAACCTAGGTAGGAAAATTTTTTCGGGAGCTTTATTTCCGAAGATACTT
TTAAAACAGCCAACCAACAAGACAGCTTATAGAGGGAATTCTCCAAAGCC
ATCCAGTAGTTTGAGCAAGCTTTCATCTTTCGTCTTGGGTTGTCAATCTT
GTGGTTTTGATAATAAACCTGGACAATCGAACTCCTATAGAAAGTTGTAT
TTTGTTAATCTTCGAATTCTAAGACTAAAACACTAGCCTTACTCTGTATT
TTCCCTTGTAGGAGAAAGACAACGAGTCTCTTATTGAAACAATCATCGAT
CGAATAAGCATGAAGAATGAAGCAGTGATTACTTATGGCTTATGTCAAGA
CCAAAAGGCCTTCTATTTCCTATACCTCAACAAAACTAAACCTTACAAAT
GTCGCCAATTATCGTTTTTCGATCGATCAATTAATGAAAATATCTACCCT
CAAGAAATATCAGCAGCTATTCAAGAAGTGACGATTATTTTGCTACCAGA
GTTACTCGAAATTTTCTTGAAAGAACTTTCAAGGTTAGATATTTACATTT
TAAAGTTGAGAATTGTTGGGATATCAGATGAGAAATTAAGAGAATATAAA
GATGAGTTTCCTTACAATTTGATGGAAACATGGCTCAATGAACATTTTGA
TGATTGGAAAATCGAGGGACTGATTGGAATGATTGAACAACAGAATTCCC
AAAATTGGTACAGGTTGTTTTTCTTTCTACTTTGAAACTACATCCCTGTA
TCCAAGTGACCCGATTAGAACATTATTCTAGCCCTTAGATTAAAATGAAC
AATCTAAAATAGTCTGGGTTTAATTGGTTAAGTTCCCAAATTCCTGGTTT
TAAATGTAAAATCTCCCATATTGATAAGTTTGTTTCTCACCAGGAGACAA
TTTTCAACCTTTGAGGTGTAGACGAGAGGGAATTCTTACCACACTAAAAA
GCTTAACAAGGGTCGATTGTATTACACCTCCTTCTCACAGACCCACTAAG
ACCCCTTCCAACTGGAAAAAGTTGGCCAAAATATCGTCCCTGGTGGAAAG
TTATACTCAAATTTTCGTCCCTGTTAAAAATAATAAAAAAACAATCCTCA
CTGCTAAATATTATACCATTTTCCTATCCCAACTGAATTTTTTGGGTCAA
AAATAATGGAATTCAAATCCCAAGCCATAAAAGATATGAGAATATCAATC
CCCATCGAGTATTAGTCCGTTATTTTTACCCCACTGGCGGAAAAAATCCT
ACCGGTCTGTGAGAAGAGGGTGTTGCATTTTCCAGGACCAAGATGAATCA
CAGCAACCATCAGCTGACGACAAAAAATATGATACATTATAACAAACCAA
CGAAGATGAGTGCAGTCGAAGGAAATGGGAGAAAACTAACGATTCGAGCA
GTTTCCATCTTCTATGAAGCATATTTGTATGAAACACCACGGATAAATAA
ATCCAGCACTTATTTTTGTGGAGATGCTAAAGAGTGTGATATTCCAGTTA
AAAATATGAATGGAAAAACCATTTATTGGCGTAAAGGATGCTGTGCAGGG
ATGGTAATTGATATGTTTGAAAAAATACGAGAACGTTTGGATTTCGAATA
TACTTTATACCTTGTCGAAGATAATAAATGGGGAAGCATTGAGAATGGCA
CATGGAATGGAATGATAAAAGATTTGATAGACAATAAAGCAGATATTGCA
CTAAACGTTATGACTTTTATCGAAAAAAGACACGAGATAGTAGATTTCTC
TTACCATTTTATTGAGTCAAGTTATGGTATTATTAGAGTTAAGCAGCGTC
GCGAAATCTTTCCAAGTTGGCAATTTCTAAGTCCACTAAGTTTTTCTCTT
AGTATGGCAATCTTTATCTCGACACTATTGTCTCTGCTCAGCATATCAAG
CTTTGAAAACCTGACAGCTTTTGTTTATACGAAACGTTACGTGTTATTTC
AAGAAAGTATGGCTTACATATACGGATTGACATTTCAGAGAGATATGGGC
GGTACAAATCCTCGAATGTGGTCAGGACGTCTTGCTGCACTTGGTTATGC
ATCTGCAATGACCATTATCATGTCCATCTATACTGCAAGAATCACTGCTA
ATTCTATTGGGCAATTTGTTGAGAGTGACCTCAAAGGATTTCAGGATGAA
AGAGTAAGGCTAAAGGGGTCATGCTTTTATTGCCTCGAAGCGTCAGGCTC
AGATGGGGTTACTAACCTTGCCGACCGACGGGGGTGTGCCGAAGAGTTTC
GACAAATGGACCCTGCGTGTGACTTGTTTGTTTGAAAACTTGCGAAAAAG
TGACCCTAAATGGGAAGAGATTCTTCTCAAAATTTTCCACTT Coding sequence (CDS) from alignment at sc0000144_pilon:214716..217307- >MSTRG.15841.2.p1 ID=MSTRG.15841.2.p1|Name=MSTRG.15841.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4239bp|location=Sequence derived from alignment at sc0000144_pilon:214716..217307- (Clytia hemisphaerica_ch_hm2_pilon)
GACCAAGATGAATCACAGCAACCATCAGCTGACGACAAAAAATATGATAC
ATTATAACAAACCAACGAAGATGAGTGCAGTCGAAGGAAATGGGAGAAAA
CTAACGATTCGAGCAGTTTCCATCTTCTATGAAGCATATTTGTATGAAAC
ACCACGGATAAATAAATCCAGCACTTATTTTTGTGGAGATGCTAAAGAGT
GTGATATTCCAGTTAAAAATATGAATGGAAAAACCATTTATTGGCGTAAA
GGATGCTGTGCAGGGATGGTAATTGATATGTTTGAAAAAATACGAGAACG
TTTGGATTTCGAATATACTTTATACCTTGTCGAAGATAATAAATGGGGAA
GCATTGAGAATGGCACATGGAATGGAATGATAAAAGATTTGATAGACAAT
AAAGCAGATATTGCACTAAACGTTATGACTTTTATCGAAAAAAGACACGA
GATAGTAGATTTCTCTTACCATTTTATTGAGTCAAGTTATGGTATTATTA
GAGTTAAGCAGCGTCGCGAAATCTTTCCAAGTTGGCAATTTCTAAGTCCA
CTAAGTTTTTCTCTTAGTATGGCAATCTTTATCTCGACACTATTGTCTCT
GCTCAGCATATCAAGCTTTGAAAACCTGACAGCTTTTGTTTATACGAAAC
GTTACGTGTTATTTCAAGAAAGTATGGCTTACATATACGGATTGACATTT
CAGAGAGATATGGGCGGTACAAATCCTCGAATGTGGTCAGGACGTCTTGC
TGCACTTGGTTATGCATCTGCAATGACCATTATCATGTCCATCTATACTG
CAAGAATCACTGCTAATTCTATTGGGCAATTTGTTGAGAGTGACCTCAAA
GGATTTCAGGATGAAAGAGTAAGGCTAAAGGGGTCATGCTTTTATTGCCT
CGAAGCGTCAGGCTCAGATGGGGTTACTAACCTTGCCGACCGACGGGGGT
GTGCCGAAGAGTTTCGACAAATGGACCCTGCGTGTGACTTGTTTGTTTGA
GAGAAAGACAACGAGTCTCTTATTGAAACAATCATCGATCGAATAAGCAT
GAAGAATGAAGCAGTGATTACTTATGGCTTATGTCAAGACCAAAAGGCCT
TCTATTTCCTATACCTCAACAAAACTAAACCTTACAAATGTCGCCAATTA
TCGTTTTTCGATCGATCAATTAATGAAAATATCTACCCTCAAGAAATATC
AGCAGCTATTCAAGAAGTGACGATTATTTTGCTACCAGAGTTACTCGAAA
TTTTCTTGAAAGAACTTTCAAGATGGCTTTCATGCCTATAAATCCTTTAT
TTCTGTTATTTCTGGGTGCGGTTTCTTTTATATTGGTTGATCACGGAATA
ACTTATCAAAAGAAGACACTTGGCTCTTTTGCTTATGGCCAGAACCTCAC
TGTAGGAATTACGGACCAAGATGAATCACAGCAACCATCAGCTGACGACA
AAAAATATGATACATTATAACAAACCAACGAAGATGAGTGCAGTCGAAGG
AAATGGGAGAAAACTAACGATTCGAGCAGTTTCCATCTTCTATGAAGCAT
ATTTGTATGAAACACCACGGATAAATAAATCCAGCACTTATTTTTGTGGA
GATGCTAAAGAGTGTGATATTCCAGTTAAAAATATGAATGGAAAAACCAT
TTATTGGCGTAAAGGATGCTGTGCAGGGATGGTAATTGATATGTTTGAAA
AAATACGAGAACGTTTGGATTTCGAATATACTTTATACCTTGTCGAAGAT
AATAAATGGGGAAGCATTGAGAATGGCACATGGAATGGAATGATAAAAGA
TTTGATAGACAATAAAGCAGATATTGCACTAAACGTTATGACTTTTATCG
AAAAAAGACACGAGATAGTAGATTTCTCTTACCATTTTATTGAGTCAAGT
TATGGTATTATTAGAGTTAAGCAGCGTCGCGAAATCTTTCCAAGTTGGCA
ATTTCTAAGTCCACTAAGTTTTTCTCTTAGTATGGCAATCTTTATCTCGA
CACTATTGTCTCTGCTCAGCATATCAAGCTTTGAAAACCTGACAGCTTTT
GTTTATACGAAACGTTACGTGTTATTTCAAGAAAGTATGGCTTACATATA
CGGATTGACATTTCAGAGAGATATGGGCGGTACAAATCCTCGAATGTGGT
CAGGACGTCTTGCTGCACTTGGTTATGCATCTGCAATGACCATTATCATG
TCCATCTATACTGCAAGAATCACTGCTAATTCTATTGGGCAATTTGTTGA
GAGTGACCTCAAAGGATTTCAGGATGAAAGAGTAAGGCTAAAGGGGTCAT
GCTTTTATTGCCTCGAAGCGTCAGGCTCAGATGGGGTTACTAACCTTGCC
GACCGACGGGGGTGTGCCGAAGAGTTTCGACAAATGGACCCTGCGTGTGA
CTTGTTTGTTTGAGAGAAAGACAACGAGTCTCTTATTGAAACAATCATCG
ATCGAATAAGCATGAAGAATGAAGCAGTGATTACTTATGGCTTATGTCAA
GACCAAAAGGCCTTCTATTTCCTATACCTCAACAAAACTAAACCTTACAA
ATGTCGCCAATTATCGTTTTTCGATCGATCAATTAATGAAAATATCTACC
CTCAAGAAATATCAGCAGCTATTCAAGAAGTGACGATTATTTTGCTACCA
GAGTTACTCGAAATTTTCTTGAAAGAACTTTCAAGATGGCTTTCATGCCT
ATAAATCCTTTATTTCTGTTATTTCTGGGTGCGGTTTCTTTTATATTGGT
TGATCACGGAATAACTTATCAAAAGAAGACACTTGGCTCTTTTGCTTATG
GCCAGAACCTCACTGTAGGAATTACGGACCAAGATGAATCACAGCAACCA
TCAGCTGACGACAAAAAATATGATACATTATAACAAACCAACGAAGATGA
GTGCAGTCGAAGGAAATGGGAGAAAACTAACGATTCGAGCAGTTTCCATC
TTCTATGAAGCATATTTGTATGAAACACCACGGATAAATAAATCCAGCAC
TTATTTTTGTGGAGATGCTAAAGAGTGTGATATTCCAGTTAAAAATATGA
ATGGAAAAACCATTTATTGGCGTAAAGGATGCTGTGCAGGGATGGTAATT
GATATGTTTGAAAAAATACGAGAACGTTTGGATTTCGAATATACTTTATA
CCTTGTCGAAGATAATAAATGGGGAAGCATTGAGAATGGCACATGGAATG
GAATGATAAAAGATTTGATAGACAATAAAGCAGATATTGCACTAAACGTT
ATGACTTTTATCGAAAAAAGACACGAGATAGTAGATTTCTCTTACCATTT
TATTGAGTCAAGTTATGGTATTATTAGAGTTAAGCAGCGTCGCGAAATCT
TTCCAAGTTGGCAATTTCTAAGTCCACTAAGTTTTTCTCTTAGTATGGCA
ATCTTTATCTCGACACTATTGTCTCTGCTCAGCATATCAAGCTTTGAAAA
CCTGACAGCTTTTGTTTATACGAAACGTTACGTGTTATTTCAAGAAAGTA
TGGCTTACATATACGGATTGACATTTCAGAGAGATATGGGCGGTACAAAT
CCTCGAATGTGGTCAGGACGTCTTGCTGCACTTGGTTATGCATCTGCAAT
GACCATTATCATGTCCATCTATACTGCAAGAATCACTGCTAATTCTATTG
GGCAATTTGTTGAGAGTGACCTCAAAGGATTTCAGGATGAAAGAGTAAGG
CTAAAGGGGTCATGCTTTTATTGCCTCGAAGCGTCAGGCTCAGATGGGGT
TACTAACCTTGCCGACCGACGGGGGTGTGCCGAAGAGTTTCGACAAATGG
ACCCTGCGTGTGACTTGTTTGTTTGAGAGAAAGACAACGAGTCTCTTATT
GAAACAATCATCGATCGAATAAGCATGAAGAATGAAGCAGTGATTACTTA
TGGCTTATGTCAAGACCAAAAGGCCTTCTATTTCCTATACCTCAACAAAA
CTAAACCTTACAAATGTCGCCAATTATCGTTTTTCGATCGATCAATTAAT
GAAAATATCTACCCTCAAGAAATATCAGCAGCTATTCAAGAAGTGACGAT
TATTTTGCTACCAGAGTTACTCGAAATTTTCTTGAAAGAACTTTCAAGAT
GGCTTTCATGCCTATAAATCCTTTATTTCTGTTATTTCTGGGTGCGGTTT
CTTTTATATTGGTTGATCACGGAATAACTTATCAAAAGAAGACACTTGGC
TCTTTTGCTTATGGCCAGAACCTCACTGTAGGAATTACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144_pilon | genome | sc0000144_pilon:214716..217307 - |
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