MSTRG.15781.1.p1 (mRNA) -

Overview
NameMSTRG.15781.1.p1
Unique NameMSTRG.15781.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000143_pilon:29469..31343-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15781.1.p1 ID=MSTRG.15781.1.p1|Name=MSTRG.15781.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1875bp|location=Sequence derived from alignment at sc0000143_pilon:29469..31343- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGATGTATGCTATGAATGTTAGATAAACGTTTTATGGAGGCTGAAATT GGATATCTTTCATCTATTTTATAGGAGAAGCCCCACCACCAGCCCCACCA GAAGTTATCCACGAAGGTAAAATATTCTTGACAGTACTTGTGTGAATTTT CTCTGTTACATTTTTTTCTGAAATAATTTCAGTTAACAATGCCTTATAAA CCTTACTCGAAATTTCCTTAACTCGGAAAAATTTTCATTCCTCGTGCAGG TTCAAGTTACCCAGCCGGCACACAACGTCAAAACAACGTCCATGTGACAT TCATAACGTCCAAATAACGTTATTTGAACGTTAAAATAACGTTGTGTGCC AGCTGGTTATGAAGACTCAACTGTATAAATACCAAAAAGGTTCGAGAACA AAAATTGATAGATTTTTATTTTAAAATTTTAGTGTATTCTTTTATTTTTT CTGATGAAAAATATCTTTTAATATTCTACTTGGCTCTGGTTTTCATTGAG CACTCTGCAACATCAATCACAAACAATACACTACACTATTTTAAATTTTA GACATTTTACTTGGCCGGAATAAGTCATGCCGATCGTTATTTCATCACTT TCAAATCGAACATCTGTGGAAAGTATATCATATTCATCCATGGAATGACC ACAGAAAAATCAAAGTACTCTGTAAAAGTAAGTATTCCGTAATTTTGACA AGATTAAAACACCCCTGTCTCAAAGCCCCGGTGCAACTTTTTTCCTCAGT GGGGATAAAAACTCCTATTGAAATCCCAATGAGGATGAAAATTTTATTGT TCCAAGGTTAAAAAACCCAGTGGGGATGGGTTTGGAGTGCAATTTTTGAA TTTCGAATGGGGATGAAATCAAAGTCAATTTCCCAGTGGTGCTGAAATTT CAGGGTATTTTTTCCACCGGAGATGAAATTTTTGCAAAATCTTCCAGTGG GGCAGGGGTCCCAGCGGGTCTGTGACACGGGTTGTCTCATTGCACCGAAG TGGCTAAACTGAAACTCTTGGATGAGAAATGAAGCCACTTATTTCCCATT CAAAACGCTTTTCCCCGCGTTGTCTTTACAATAACACCAGATTGAAATAA AAGTCCATTGCTATATTTCGTAAATAGTCAGTTCTTTAAATGTTTGGAAA TTTGAAAAAAAATTAAAGAAAAAAACATAACCACTTCCTGTTTCAGTGAC TTGAAGTTACAATAGTGGACAAATTTCTCGTTTTTTGCAATTTTGTGGTT TTGCAAAATAGTAGGTCCAGCTTCAGTGTAAAAATCAAACTTAGAAAAGA TGGTGTTTTGATCGGTATGCTACTTTACTGAATGAAATTGAGTTTAAATT TTATGGACGTATTTTGATTTTATAGGTCAAGATACAAGACTTACAAGTTT AAACTCTGCAAACCTTCTCCCAATTCGAGAAATCAAAGGCGAGGACCTAC AAGATGGACTTGATATTTCTCAAGTTAGCACTGGCAGTATTAGAGTTCAT ACCTCCTTTATGAAAGCTCTGGAGAGTCTGATACAGTTCGACTATATTCT CCTGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGATTTGAATTCGG CACCGCTTTTTAAGCCTTTCGATTATTTTTTGGGACTCACTGATGACCGA CCCCCAAAATACTCTATGGCTTTCCATGCTCATTATGGTGACATGGTCCT GGACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAA GAGCCTTTAAGAACATTGTTGTGAATTCAGATGGAAAGAAATTTACAATG TCTAATGAATCAATGCAATGTTTTGGAGATGATGGCGACTGGATATGGTT TACAATGGATATTAGGTGAATGCTG

Coding sequence (CDS) from alignment at sc0000143_pilon:29469..31343-

>MSTRG.15781.1.p1 ID=MSTRG.15781.1.p1|Name=MSTRG.15781.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=360bp|location=Sequence derived from alignment at sc0000143_pilon:29469..31343- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTCTGGAGAGTCTGATACAGTTCGACTATATTCTCCTGCATTG
CCGACAGAAAAATAGCTCTTTGGCTTATGATTTGAATTCGGCACCGCTTT
TTAAGCCTTTCGATTATTTTTTGGGACTCACTGATGACCGACCCCCAAAA
TACTCTATGGCTTTCCATGCTCATTATGGTGACATGGTCCTGGACCCTAT
TGACGGCTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGAGCCTTTA
AGAACATTGTTGTGAATTCAGATGGAAAGAAATTTACAATGTCTAATGAA
TCAATGCAATGTTTTGGAGATGATGGCGACTGGATATGGTTTACAATGGA
TATTAGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15781MSTRG.15781Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15781.1.p1MSTRG.15781.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15781.1.p1.exon3MSTRG.15781.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15781.1.p1.exon2MSTRG.15781.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15781.1.p1.exon1MSTRG.15781.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143_pilongenomesc0000143_pilon:29469..31343 -