MSTRG.15757.1.p1 (mRNA) -

Overview
NameMSTRG.15757.1.p1
Unique NameMSTRG.15757.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:541756..544601-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15757.1.p1 ID=MSTRG.15757.1.p1|Name=MSTRG.15757.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2846bp|location=Sequence derived from alignment at sc0000142_pilon:541756..544601- (Clytia hemisphaerica_ch_hm2_pilon)
AGATACAAAACAAATCAAAAAGCAATGGATGAAGAAATAAATAAAGTAAA
ACGGGATTACCACCATTGGGAAATGATATTAAAAAATATAACCGAAGCGG
AGCTCGATTTTGTTGGCCTTGAAGTCAAGAAAGGCAATATACTTGACATG
ATCTGTCACTACGATGAACGATACCCACCGAGTCATTCACTATTCCCGAG
TATCATGCGAACATACACAAGCGGAAGTGTGGCTGAGAAACTGAATACAA
CATATTCAGATCTTGATAACATATACGAAATTGGACCAGGAGTTGTCCGA
AACAAAGTCAAGAGCAAATCGGACACTGTTAAAAGGGCGTTATATTACGT
GGAAACGGAACATAAGGGGTTTTACCAGATTGAAGATCAAGATGGGGATT
TTCTATACCCGATCCTTATTCAAAGAGCACTTTACCATCAACTAAAAATC
AATGATCCGGAACAGAAAGCTAATGTTCTTGAAAATAACCTTAGTGTAGA
TTCAAAAAGTAACCCAAATCCATCTATATGTACGGCAAAAAGAGATAAAG
TCATTGCTCTACGCTTGGACCAGTGGCCGGATGAGATCCAACAAAGTTTC
CTCCAAAGAAATCCCAATCTCGAACGTTGTACAGGTATAGTGACCGTTAT
TTAAAAAAAGCTTTTTTCCAAACGTCTCTTTTTGATAGTGGAACGATCAA
ATGATAATGATGAAATCGATCTAAATTTAGAACGCCATGTAATCAACGTA
TACAAAAGTTAATTACTTTTCTTAATCATTTTTTTAGAAATTCCATTACT
TTTGGTACCAAAAAGTCACCCAGAAAGCAAAAGTCCAGAAGTTGAATGGC
GATTGTCATTTTCATTGGTTGAAAAAGAAATACTTTTGAATCTGCCGATA
TCCTGGCGAAAGGCTTACCAGATTGCAAAGAGTGCATATCGTACATTTTA
CAATGATTATATGGGAAATTTTTCATTGAAAGGTCAGCAATCATACAAAG
AAAGTCTATTGAAGAGTTATCACATTAAAACTGTTTTAATGTGGTTAAAC
GAAGAACAACCAGACTTCGACCAAAATGATATTATAGGTTTACTGCAACT
AATTTTTGACCGTCTGTTGCAAGCTATTGATGAATTAAATCTCCCTAATT
ACTTCATTCCAAAGCAGAATCTTTTGAGCATTAACTCATTGACTGATTCA
ACACAAATAAATGAACTTAGAATAATGCTTAAAGCATTTTCAATGACTCT
TAGAGAACCCCCTGATCTTTCTCAGAGCGATGATGTAAAAATGCGCTGTT
TTAAATTATCAATCTCCGAAGGAGCACTTTCGATGCTCAAGAAAGTTCCA
GATGGGTATCGTTTTGGAGAATCAAGAAGTAGCTACTTGATGTCCTTTTT
CAAAGATTGTATGAATAGCTTTTTGACATTCTTCAACGATCTGTTTCACT
CTAAGTTTCGTGGTTTGCATTATATTTCAACGTGCAACATTCAACCGATA
AACAGGTCATTTTATCATCTAGCTATGGTGAAATTTGGACTAGTTGGTCT
AGAATCTAAAGTGTTTTCGCTATCAAAACTTTTAGCAGAATACTTGGACA
GATTTTGGAATTTACAGAACATGCCTTGCCCTGATGAAAAAATTAATACC
AAAATTATGGTTGATTTGCAACTCGATCAGGAAGAGATGAAACAGCTCCA
AAATAGCGATATAACGAAATTATTTAATGAGATCCATTCTGAGATCAAGG
AAGATATAGCACGGTATGAAACCAACTTCGACGGTGAATATATAGCTACT
CGTAGTGGGTACAACTGCCTTTGTTCAGATGCTGGAAAACAGATGACTTT
TACTGAAAAGACCATAAGAACTCCGGTCGAAATCTTCCAAACCCTGTACG
AAATACATTTAAAGCAACACATTCAACGTGTCAATCAAATGGTTCAGAAT
CAACTACGCGAGGATGAACGAATAAAATCAGAACTCAATCAACGACAACA
GTATCAAAAGGAGAATCGAGAGTTTCGAGAGGCTCTATCTAAAAAATATG
AAATGGATGAAAAACGACGCCACAATGAAAAAATACAGCGCATGTCACAA
CGAGACCAGCGAATGTTTGACATGGCAAAAAGAGAGGAAGAAATTGGACC
ATGGGAATCTGATAAACAAATCGAGGCAACCCAGGCGCAACAAGAAGCTG
ACCAAAAAAAACTCGAAGCAGACCTTGCACAAGAAAAGGCTGATCTGAAT
CAAAGGGAGATCGTTCAAAGACACTGGGAAGCAATTCAACAAGATTGGAC
TCCGGAGGAACAATCTGAAATAAATGACCAGGAAAATTGGAAGTCACTTC
AATGGTTCACAAGCTGGGAGAGAAATCTTAACGGTATGAAAAAAGACCGT
GAATATCGCATAAGACAACAACAAGCAGACCGACAAACAACGGCATGCAG
ACGAAAAACAAAGTGACGTATACCCAATACAAAAGAATGCGGATGAAAAA
CAAAAGGACGCCGACAAAGAAGAGGAAACAAATGTTACCACAAGTGAATC
GCACATAAAGCAACGCGAAGTTAGTCGAATACAAAGAGAAGCAGATCGCA
TTCAAAGGGAGGCTGATGATTGCCAACGTCGGGCAAATTGTGAAAGACGA
CGTGGAAATGAAGAACAAATAAGATTCGGGAGACATAATTACGATACAAA
TCCAGAATCATTCAAAATCAATATTGATGGTCGTTTAAATTGTGCAGATA
GAATTCAACTTGAAGCAAACGAAAAACAACTAGAAGCGGATGAGAAACAA
CGAGCAGCCGATGAAAAGCATCGAGGAGCAGACGAAAACCAACGAG

Coding sequence (CDS) from alignment at sc0000142_pilon:541756..544601-

>MSTRG.15757.1.p1 ID=MSTRG.15757.1.p1|Name=MSTRG.15757.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4578bp|location=Sequence derived from alignment at sc0000142_pilon:541756..544601- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTCCATTACTTTTGGTACCAAAAAGTCACCCAGAAAGCAAAAGTCCA
GAAGTTGAATGGCGATTGTCATTTTCATTGGTTGAAAAAGAAATACTTTT
GAATCTGCCGATATCCTGGCGAAAGGCTTACCAGATTGCAAAGAGTGCAT
ATCGTACATTTTACAATGATTATATGGGAAATTTTTCATTGAAAGGTCAG
CAATCATACAAAGAAAGTCTATTGAAGAGTTATCACATTAAAACTGTTTT
AATGTGGTTAAACGAAGAACAACCAGACTTCGACCAAAATGATATTATAG
GTTTACTGCAACTAATTTTTGACCGTCTGTTGCAAGCTATTGATGAATTA
AATCTCCCTAATTACTTCATTCCAAAGCAGAATCTTTTGAGCATTAACTC
ATTGACTGATTCAACACAAATAAATGAACTTAGAATAATGCTTAAAGCAT
TTTCAATGACTCTTAGAGAACCCCCTGATCTTTCTCAGAGCGATGATGTA
AAAATGCGCTGTTTTAAATTATCAATCTCCGAAGGAGCACTTTCGATGCT
CAAGAAAGTTCCAGATGGGTATCGTTTTGGAGAATCAAGAAGTAGCTACT
TGATGTCCTTTTTCAAAGATTGTATGAATAGCTTTTTGACATTCTTCAAC
GATCTGTTTCACTCTAAGTTTCGTGGTTTGCATTATATTTCAACGTGCAA
CATTCAACCGATAAACAGGTCATTTTATCATCTAGCTATGGTGAAATTTG
GACTAGTTGGTCTAGAATCTAAAGTGTTTTCGCTATCAAAACTTTTAGCA
GAATACTTGGACAGATTTTGGAATTTACAGAACATGCCTTGCCCTGATGA
AAAAATTAATACCAAAATTATGGTTGATTTGCAACTCGATCAGGAAGAGA
TGAAACAGCTCCAAAATAGCGATATAACGAAATTATTTAATGAGATCCAT
TCTGAGATCAAGGAAGATATAGCACGGTATGAAACCAACTTCGACGGTGA
ATATATAGCTACTCGTAGTGGGTACAACTGCCTTTGTTCAGATGCTGGAA
AACAGATGACTTTTACTGAAAAGACCATAAGAACTCCGGTCGAAATCTTC
CAAACCCTGTACGAAATACATTTAAAGCAACACATTCAACGTGTCAATCA
AATGGTTCAGAATCAACTACGCGAGGATGAACGAATAAAATCAGAACTCA
ATCAACGACAACAGTATCAAAAGGAGAATCGAGAGTTTCGAGAGGCTCTA
TCTAAAAAATATGAAATGGATGAAAAACGACGCCACAATGAAAAAATACA
GCGCATGTCACAACGAGACCAGCGAATGTTTGACATGGCAAAAAGAGAGG
AAGAAATTGGACCATGGGAATCTGATAAACAAATCGAGGCAACCCAGGCG
CAACAAGAAGCTGACCAAAAAAAACTCGAAGCAGACCTTGCACAAGAAAA
GGCTGATCTGAATCAAAGGGAGATCGTTCAAAGACACTGGGAAGCAATTC
AACAAGATTGGACTCCGGAGGAACAATCTGAAATAAATGACCAGGAAAAT
TGGAAGTCACTTCAATGGTTCACAAGCTGGGAGAGAAATCTTAACGGTAT
GAAAAAAGACCGTGAATATCGCATAAGACAACAACAAGCAGACCGACAAA
CAACGGCATGCAGACGAAAAACAAAGTGAATGGATGAAGAAATAAATAAA
GTAAAACGGGATTACCACCATTGGGAAATGATATTAAAAAATATAACCGA
AGCGGAGCTCGATTTTGTTGGCCTTGAAGTCAAGAAAGGCAATATACTTG
ACATGATCTGTCACTACGATGAACGATACCCACCGAGTCATTCACTATTC
CCGAGTATCATGCGAACATACACAAGCGGAAGTGTGGCTGAGAAACTGAA
TACAACATATTCAGATCTTGATAACATATACGAAATTGGACCAGGAGTTG
TCCGAAACAAAGTCAAGAGCAAATCGGACACTGTTAAAAGGGCGTTATAT
TACGTGGAAACGGAACATAAGGGGTTTTACCAGATTGAAGATCAAGATGG
GGATTTTCTATACCCGATCCTTATTCAAAGAGCACTTTACCATCAACTAA
AAATCAATGATCCGGAACAGAAAGCTAATGTTCTTGAAAATAACCTTAGT
GTAGATTCAAAAAGTAACCCAAATCCATCTATATGTACGGCAAAAAGAGA
TAAAGTCATTGCTCTACGCTTGGACCAGTGGCCGGATGAGATCCAACAAA
GTTTCCTCCAAAGAAATCCCAATCTCGAACGTTGTACAGAAATTCCATTA
CTTTTGGTACCAAAAAGTCACCCAGAAAGCAAAAGTCCAGAAGTTGAATG
GCGATTGTCATTTTCATTGGTTGAAAAAGAAATACTTTTGAATCTGCCGA
TATCCTGGCGAAAGGCTTACCAGATTGCAAAGAGTGCATATCGTACATTT
TACAATGATTATATGGGAAATTTTTCATTGAAAGGTCAGCAATCATACAA
AGAAAGTCTATTGAAGAGTTATCACATTAAAACTGTTTTAATGTGGTTAA
ACGAAGAACAACCAGACTTCGACCAAAATGATATTATAGGTTTACTGCAA
CTAATTTTTGACCGTCTGTTGCAAGCTATTGATGAATTAAATCTCCCTAA
TTACTTCATTCCAAAGCAGAATCTTTTGAGCATTAACTCATTGACTGATT
CAACACAAATAAATGAACTTAGAATAATGCTTAAAGCATTTTCAATGACT
CTTAGAGAACCCCCTGATCTTTCTCAGAGCGATGATGTAAAAATGCGCTG
TTTTAAATTATCAATCTCCGAAGGAGCACTTTCGATGCTCAAGAAAGTTC
CAGATGGGTATCGTTTTGGAGAATCAAGAAGTAGCTACTTGATGTCCTTT
TTCAAAGATTGTATGAATAGCTTTTTGACATTCTTCAACGATCTGTTTCA
CTCTAAGTTTCGTGGTTTGCATTATATTTCAACGTGCAACATTCAACCGA
TAAACAGGTCATTTTATCATCTAGCTATGGTGAAATTTGGACTAGTTGGT
CTAGAATCTAAAGTGTTTTCGCTATCAAAACTTTTAGCAGAATACTTGGA
CAGATTTTGGAATTTACAGAACATGCCTTGCCCTGATGAAAAAATTAATA
CCAAAATTATGGTTGATTTGCAACTCGATCAGGAAGAGATGAAACAGCTC
CAAAATAGCGATATAACGAAATTATTTAATGAGATCCATTCTGAGATCAA
GGAAGATATAGCACGGTATGAAACCAACTTCGACGGTGAATATATAGCTA
CTCGTAGTGGGTACAACTGCCTTTGTTCAGATGCTGGAAAACAGATGACT
TTTACTGAAAAGACCATAAGAACTCCGGTCGAAATCTTCCAAACCCTGTA
CGAAATACATTTAAAGCAACACATTCAACGTGTCAATCAAATGGTTCAGA
ATCAACTACGCGAGGATGAACGAATAAAATCAGAACTCAATCAACGACAA
CAGTATCAAAAGGAGAATCGAGAGTTTCGAGAGGCTCTATCTAAAAAATA
TGAAATGGATGAAAAACGACGCCACAATGAAAAAATACAGCGCATGTCAC
AACGAGACCAGCGAATGTTTGACATGGCAAAAAGAGAGGAAGAAATTGGA
CCATGGGAATCTGATAAACAAATCGAGGCAACCCAGGCGCAACAAGAAGC
TGACCAAAAAAAACTCGAAGCAGACCTTGCACAAGAAAAGGCTGATCTGA
ATCAAAGGGAGATCGTTCAAAGACACTGGGAAGCAATTCAACAAGATTGG
ACTCCGGAGGAACAATCTGAAATAAATGACCAGGAAAATTGGAAGTCACT
TCAATGGTTCACAAGCTGGGAGAGAAATCTTAACGGTATGAAAAAAGACC
GTGAATATCGCATAAGACAACAACAAGCAGACCGACAAACAACGGCATGC
AGACGAAAAACAAAGTGAATGGATGAAGAAATAAATAAAGTAAAACGGGA
TTACCACCATTGGGAAATGATATTAAAAAATATAACCGAAGCGGAGCTCG
ATTTTGTTGGCCTTGAAGTCAAGAAAGGCAATATACTTGACATGATCTGT
CACTACGATGAACGATACCCACCGAGTCATTCACTATTCCCGAGTATCAT
GCGAACATACACAAGCGGAAGTGTGGCTGAGAAACTGAATACAACATATT
CAGATCTTGATAACATATACGAAATTGGACCAGGAGTTGTCCGAAACAAA
GTCAAGAGCAAATCGGACACTGTTAAAAGGGCGTTATATTACGTGGAAAC
GGAACATAAGGGGTTTTACCAGATTGAAGATCAAGATGGGGATTTTCTAT
ACCCGATCCTTATTCAAAGAGCACTTTACCATCAACTAAAAATCAATGAT
CCGGAACAGAAAGCTAATGTTCTTGAAAATAACCTTAGTGTAGATTCAAA
AAGTAACCCAAATCCATCTATATGTACGGCAAAAAGAGATAAAGTCATTG
CTCTACGCTTGGACCAGTGGCCGGATGAGATCCAACAAAGTTTCCTCCAA
AGAAATCCCAATCTCGAACGTTGTACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15757MSTRG.15757Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15757.1.p1.exon2MSTRG.15757.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15757.1.p1.exon1MSTRG.15757.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15757.1.p1MSTRG.15757.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:541756..544601 -