MSTRG.15736.1.p1 (mRNA) -

Overview
NameMSTRG.15736.1.p1
Unique NameMSTRG.15736.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:80818..82227+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15736.1.p1 ID=MSTRG.15736.1.p1|Name=MSTRG.15736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1410bp|location=Sequence derived from alignment at sc0000142_pilon:80818..82227+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACTGCCAATATGGATTACAAAATGCAATAACATCtctgtattttgaaa
ttttagaagtATAGAATCATGCCTGTTATAAGTCTCAATCAAACTACCTT
TAAAATTTGgatgcaaaagaaaaaagagcttGGATATACACAGAAAACAC
ACAGTGCATTTGCACATTTTCTGGTAACACATCTGACTGCTGGTGAGAGT
GAAAGTGAACCAGAAACTGATTCCTCAAACAGCCAACAAAGTGAAACAGA
TGAAGAAATAATTGTTGCTGATGTTATTGAAAGTGATGACGAACAACAGA
CTGTTGATGTCACTGGTGGTCTAGAACCTGAACATGATGATGGCAATGCT
CTTCTTCAGCAAGATACAGAGtgagtgattcttataaatccCTAAATTGC
AGTAGCAATTTTTACTTCAATTAAGGTATAAaaaccaggcgtagttaatc
gatataatcgataatcttgagttaatcgataaataattgataagtaatcg
atggattagatatcgattaaccgatagaatcgataggtaatcgatactca
agattttttcaaagctcgattatttatcgatcaatcagttacatcaaaat
acCTCGAAAatatcaatatgaaaattgcggaatcagagaacgtatgtctc
gctcattataaaaaggccgagacaaactttcaataattggattgtaacat
cgagttaagtctcttttgttaagtcaccagggggtaaataaaacagacct
tgatacatttatcgttcgtttcaacttgaccatttgtttaaaactcagcc
tcctaaatatttggggtaggtaaaatatgtacaaagaaattcatactttt
ccaacccggccaatctttaaaaaagaagcgtacaataaaatgtaattacc
ctttccaataaataaacctcttcggtgacgagcgtagtctactctgacgt
aattgtaaaatttatgtaatgggagtttgacatagtaatataatgttgtt
tggggaattatgaagttctctgggatttcgattgcatttattcaggtcta
ttttttatgacttctaatggtactttttctaacgagtttgattactctgt
tctcacacttatgtcttttttttcgcgtccttttccgtgattacttttat
ttatatttttaaagacaggtaagaaggcatattgatgtaactgtcaattt
tgtcatcgattgtttatcgattatagatcgattatacttcgattaaatta
agtattgattaaaaatcgatcagctatcgatcacagcttttgatcgatta
catatcgatcaaaaattgattaatcatcAATCAAATAGTTAATCGATCAA
CTATCTATTCGTGATCGATtatatttatcagattttagggagtTTGGATt
aacgttcgac

Coding sequence (CDS) from alignment at sc0000142_pilon:80818..82227+

>MSTRG.15736.1.p1 ID=MSTRG.15736.1.p1|Name=MSTRG.15736.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000142_pilon:80818..82227+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTGTTATAAGTCTCAATCAAACTACCTTTAAAATTTGgatgcaaaa
gaaaaaagagcttGGATATACACAGAAAACACACAGTGCATTTGCACATT
TTCTGGTAACACATCTGACTGCTGGTGAGAGTGAAAGTGAACCAGAAACT
GATTCCTCAAACAGCCAACAAAGTGAAACAGATGAAGAAATAATTGTTGC
TGATGTTATTGAAAGTGATGACGAACAACAGACTGTTGATGTCACTGGTG
GTCTAGAACCTGAACATGATGATGGCAATGCTCTTCTTCAGCAAGATACA
GAattttagATGCCTGTTATAAGTCTCAATCAAACTACCTTTAAAATTTG
gatgcaaaagaaaaaagagcttGGATATACACAGAAAACACACAGTGCAT
TTGCACATTTTCTGGTAACACATCTGACTGCTGGTGAGAGTGAAAGTGAA
CCAGAAACTGATTCCTCAAACAGCCAACAAAGTGAAACAGATGAAGAAAT
AATTGTTGCTGATGTTATTGAAAGTGATGACGAACAACAGACTGTTGATG
TCACTGGTGGTCTAGAACCTGAACATGATGATGGCAATGCTCTTCTTCAG
CAAGATACAGAattttag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15736MSTRG.15736Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15736.1.p1.exon1MSTRG.15736.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15736.1.p1.exon2MSTRG.15736.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15736.1.p1MSTRG.15736.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:80818..82227 +