MSTRG.15732.1.p1 (mRNA) -

Overview
NameMSTRG.15732.1.p1
Unique NameMSTRG.15732.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:8056..9876+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15732.1.p1 ID=MSTRG.15732.1.p1|Name=MSTRG.15732.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1821bp|location=Sequence derived from alignment at sc0000142_pilon:8056..9876+ (Clytia hemisphaerica_ch_hm2_pilon)
CAtctaaaatttgttttgtttgagCAAGAATGACATATGAAACTAAATCA
ATAGAAAGACAGAGGGGGGAGCAtaatttgatgttatttttaaaaacagt
tcGGGCATTTGAGATGATTTAAATAAATCAACTACTTGTTGCATTTTTGA
AGCATTGAGTTTTTTATTCGTTCTTGTTTGTGTCTGTGTCTCTTTATGTT
TGTTGATGCTGTTTAAGAAAAAATGAATCCTGGAGATGAAAGAAATTTAG
CTCACAGTGCTGTCGGTAGAAATCCAATGGTGGAAATGGATAGTGGAGAG
ATTgtgaaactgaaaaaagaacatcaaaaagaaattcaaaaactgACCTA
TGAATCAAAGATAGAGATGATGGAATCACAAATGAAAACCATGcagttag
aaaaagaaaatcaaactttatcTCATCAATTTGAGATGTTCAAATTAAAG
AATTCTTATGATTCTCAATCAAGTCAAGCTCAAGCTGATCAACAACTGCA
AAAACAGAAAGACGAGCTCCAAAATAAGTTAGTTGAAAAGGAGAAACAAT
TAGTAGCCAAAGAGCACGAAATGGTTCTGTacaagaaagaacaagaaaat
gaatggaaaatgaaaatgaaagatttggaaaacgaacacaaaattaaaat
gttacaaaaggaggtaaaaatAGCCGAGATGGagaaagtaatgaaagaaa
atgaagaaaccatacagaaaatgagagctgaaatgaaaaCTGTTAATGAG
CAGGCAGTCAAAAAAGAAAGTGCCCGGCTGGATACTCCTGTGAAAGCATT
AACCGACATTGATCGTATGGTATGGGGTGCCAATTATTTCATCCAAGGGA
TTTCACATGGTCCAAAGCTGTACGAATCATACGAGAAGTGGTACGAAAGG
ATTTCATTGTTAATGGAGAATAAAAAGTTGTATGTCGCAACCGAATTCTT
GTTCAttagaaaaaagtttgataaacaTCATAAAGTTTTGCATTTTGTGT
CgaaaagaaaatatagcgcttatAAAGACTGTAGTGACGAGTTCAACACT
GAAGGTTTAACTAAGGAACTGTATACAAATGATGGTGTTGATCTTTTTCT
ACTCCACCCGAAAATTGATACTAAACACCTAAAATTCAACCGCAATTTTA
ATGGCCATGATTATGAACGTTGGCAAGTTAAAAACGTTAATCTGGAGTTT
TATGATGATAATAACGACGCTATTGTTTTGGGGATACCTAAAATAAATGC
TGGGTGGctattttggtcaaattttacGCGTTTGAAATTTGAATCTAAGA
AGATCGTAAATTAAGAATTCTATAACCAGAATAAAATAATCAGATTTACC
CTACAGATTCCTTCTATGTCCCTGAGCTAAACCTTCAGATCTTTTTGCCT
AaccattttccaaaatcgagatattcaagttacaagtttttggctATTAG
CaaaaaaaCAATACATTAAATATACAAAAGCTATTTAAAACAATACAACT
TTTCACGACGTAGTCTTTTTATTAATCAGTCATTTGCACCTTTAGTCCCA
TATTATGCCATTGTTACGATTTTACAGCTCATACATAATGGTCTCTAGGT
Atttatttttaactgtttttagcttttcgttttgttttttttcaaaactg
tctTTACTGTAATTTTATTAGCCAATTATAgatttgttcttaaaatgttt
taaaatttttttcttgttgatAGATTTTTCCAATCTGATGATGGACCTCT
TGTAGTGAAGGTCGAATAtactgtttttaaataaaaacatgacGCTTCTG
GTTATTCTTTTTTCATCACAG

Coding sequence (CDS) from alignment at sc0000142_pilon:8056..9876+

>MSTRG.15732.1.p1 ID=MSTRG.15732.1.p1|Name=MSTRG.15732.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1092bp|location=Sequence derived from alignment at sc0000142_pilon:8056..9876+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCCTGGAGATGAAAGAAATTTAGCTCACAGTGCTGTCGGTAGAAA
TCCAATGGTGGAAATGGATAGTGGAGAGATTgtgaaactgaaaaaagaac
atcaaaaagaaattcaaaaactgACCTATGAATCAAAGATAGAGATGATG
GAATCACAAATGAAAACCATGcagttagaaaaagaaaatcaaactttatc
TCATCAATTTGAGATGTTCAAATTAAAGAATTCTTATGATTCTCAATCAA
GTCAAGCTCAAGCTGATCAACAACTGCAAAAACAGAAAGACGAGCTCCAA
AATAAGTTAGTTGAAAAGGAGAAACAATTAGTAGCCAAAGAGCACGAAAT
GGTTCTGTacaagaaagaacaagaaaatgaatggaaaatgaaaatgaaag
atttggaaaacgaacacaaaattaaaatgttacaaaaggaggtaaaaatA
GCCGAGATGGagaaagtaatgaaagaaaatgaagaaaccatacagaaaat
gagagctgaaatgaaaaCTGTTAATGAGCAGGCAGTCAAAAAAGAAAGTG
CCCGGCTGGATACTCCTGTGAAAGCATTAACCGACATTGATCGTATGGTA
TGGGGTGCCAATTATTTCATCCAAGGGATTTCACATGGTCCAAAGCTGTA
CGAATCATACGAGAAGTGGTACGAAAGGATTTCATTGTTAATGGAGAATA
AAAAGTTGTATGTCGCAACCGAATTCTTGTTCAttagaaaaaagtttgat
aaacaTCATAAAGTTTTGCATTTTGTGTCgaaaagaaaatatagcgctta
tAAAGACTGTAGTGACGAGTTCAACACTGAAGGTTTAACTAAGGAACTGT
ATACAAATGATGGTGTTGATCTTTTTCTACTCCACCCGAAAATTGATACT
AAACACCTAAAATTCAACCGCAATTTTAATGGCCATGATTATGAACGTTG
GCAAGTTAAAAACGTTAATCTGGAGTTTTATGATGATAATAACGACGCTA
TTGTTTTGGGGATACCTAAAATAAATGCTGGGTGGctattttggtcaaat
tttacGCGTTTGAAATTTGAATCTAAGAAGATCGTAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15732MSTRG.15732Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15732.1.p1.exon1MSTRG.15732.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15732.1.p1MSTRG.15732.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:8056..9876 +