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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:276..5724+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15731.1.p1 ID=MSTRG.15731.1.p1|Name=MSTRG.15731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5449bp|location=Sequence derived from alignment at sc0000142_pilon:276..5724+ (Clytia hemisphaerica_ch_hm2_pilon)
CATTGAGTTTTTTATTTGTCCTTGTTTATGTCTGAGTCTCTGTATGTTTG
TTGATGCTGTTTAAGAAAAAATGAATCCTggagatgaaaaaaatttagcG
CACAGTGCTGTCGGTAGAAATGCAATGGTAGAAATGGATAGTGGAGAGAT
TgtgaaactgaaaaaagaacatcaaaaagAGATTGAGAAACTCAAAATGG
AATTTAAGATTCAACAACTGGAATCTGAGAAcgagaaaactttgaaaatc
atgcagttagaaaaagaaaatcaaactttatcTCATCAATTTGagatttt
caaattaaagaattcttattatTCTCAATCAAGTCAAGCTCAAGCTGATC
AACAACTCCAAAATAAGTTAGTTGAAAAGGAGAAACAATTGGTAGCCAAA
GAGCACGAAATGGTTCTGTACaagaaagaacaagaaaatgaatggaaaat
gaaaataaaagatttggaaaatgaatggaaaatgaaaatgaaagatttag
aaaatgaatggaaaatgaaaatgaaagatttagaaaatgaacacaaaatc
aaaatcttacaaacggagacaaaatTGAACGAGATGGAGAAAGAAATGAC
AGAGAAAGAAGCAACTGTCCAACATTTAAAccgagaaattgaaaatttga
aaaggctTATTCCAAACGAAAACCAAGCTGCGGAAAAAGTTGAGGAAAAT
ATGACGACGATCGATCGTTTGATTTGGGGAGCAGAATATTTTCACGAAGG
AAATAAATCTTCACTTTTGTACCCTTCTTATGGTGACTGGTACAAAGCGA
TTTCCGCGATGATGGGAAATAAAAAAGTGTTCAAGAAGGATAAATATTTG
TTCATGAGAAGGGAATTCAATAAGGCCTATGACTATCTGTATTTCGCGAA
CAGAAAAGACAACAGTTACGAAGAACAGTTGAAGGATTTTATGGTTGAAG
ATTCGAAAATTGTATGGGAAACTGcaactttctttcttcttcataCAAAG
gattttggaaaacatttaaAGTTTGGACGAATGAGTCAGGAAGTTTCTTT
TGAATATTGGCGCGTTGTTAATGTTTCAGGTTCTTATTTCGGTGCTAAAC
AATCTGCAATTGTTTTCGGAATTTTAAAGTGAATCAAATATACCAAAGAT
TGTAACGAATAAAACATTTTAATCAGAGAGTCTAGGCTTTGATTGTTTTA
CAATTTTGTAAGTTCATTTTTGAGAGCAGAATTTAATCAGGTCGGATCAG
taccagctggcacaaaacgttctTTTAACGTACATTTAACGTTTAATGGA
CGTTAGGGATGTCAGATGGACGTTATTGTGACATTCTGTGCCAGCCAAGT
CATGACCCTTTTTAGTGACGTGTTTGTATACGGAACCCCAGCTTCACTCG
AAAAGAAAGCAATTGCACTACAAAACCTTTCCCACAGTTTTGTGAACCTG
AGGACAAAAGaacttctatccccattggcatttcgATAGAAATCTTCATT
CCCACTCTGGAAAGAGGCTCCcttggggctgtgagacaggggtgttttgg
tGTCATttggtactaaaataccaaaatggtTGTATAAAAAGGAAGACACG
AGAAATCTTACTACATTTTATTACCAAAACtagcaatttcatttttcttt
aagttttttttttaaataccacTTCTTATAATAGTGGGTGCACTTTATAC
GAAAATTTTAGTATCTTTAGATTTAAATACattatggaaaaaaattttac
aaaagaaagaaattttattgaatcatTCATTATGGCTTGTTTCTTGTCTC
GAATATTTTGTGTCCTACCTTTTACTGTATTGAGAAGATCCGACTTTTCT
TTAGGAAGGCGAGATCGCaaaaaaaGTGTTAGTGCTAGTGGGAGGAATGT
GCACAAAGTTGCTGACGATCAGCAAATTACAAAGCTCaaaaaagaacatc
aaaaagAGATTGAGAAACTCAAAATGGAATTTAAGATTCAACAACTGGAA
TCTGAGAACGAGAAAACGTTGAAAACCATGCAGCTAGAAAAAGAATTATT
AGGCAATCGAATTATTCTCCGATAAGGTTTACTCAAACCGAGAACTAACG
AACGAGAAATATAGCTCATTAACTTTGACAATTTTTCGGCAGAAATGAAC
AATAGCTTTATCCTTATCTGAGTGATGTGAAAATGATATGTGCTCGATTT
GAATTGAGGGTAATTgtttaaaaactaaaactaaagtctgtctcaatata
atttgcaggggagacaaaaatggctataactgttgatagaatttgaatta
tatcgggggggggggggtcggtagtaaaatctcagacatatatgagtagt
aaaaggatttttatgaatttttacataccaccacccagactcttggaaga
ggtattttactaccctggtagtaaaagtttttgggacaatttgtcatgga
gaccacctactttttggttgcttttaggactgatttgcaaaaaaagctaa
aaatgattatttttgtgaCACATTTgtcacttagtgcaaaaattaatgtt
ttgcccttagaatgaaagtctttttcatattgacaaaaaatttcgaggat
tttttgtttgcagcaaacaactttccaacagaaaattttttcaaattata
aaaatcttcagatattttttcggaaaagtcatccaaaaaattgagaGAAT
TACAATAATagagctaaaatttgctaattttaccagtttaactacccagg
tagtaaaattttttcaacatttaacacatagataccacccattttagtat
ttaactaccctgggtagtaaaagtttttttcgatttttcgtcacaccacc
accgtagtaaacgtcattatgtctgagattttactaccgaccccccccct
gattatATAGTGGTGTTGTGTTTGTTGAAAcgacaaacaggagtggaata
ttatcataaagaaaaaactcaaaaaagatcggaaaataaagattgaaaat
gaagaagaagaaaatcaacttcttcaataattgtgctatgattatcattt
tcacacgagtgattcttagatcttagaacatcattaatgtgaaaaacttt
tgaatattgatttaTTATTCAATCGAAAGATCAATCACTGATTGACTACA
AATACCATCAAACAAATAACGaaaaagagcccttttttaaccctttaagt
gccaatgtcgtatatatcagacatggtcTATGTAGGAGGACGAAGCCCTC
TTGTAAtacccagtttgagttagaaatcatcatttttggtctaacttgTA
GAAatcggattgggcttcatggccaagcaaaaaaacaaatcaaaagtgag
tcttttcagcgagattttaagctaaaaagtcaaaaaaaacacaaaaattt
gacaaaaatccacttttttaagattttgaccgtcttttgaccatttttgg
tcaacgagtgatccaagaacctccaaatttggccctgattaacttgattc
tgtcctccagcaaattagtttgaagttttaccactaggcgcctttctatc
attcagtcaggtccgcgcagcggtcAACTGAAGTTGTCATGACAtctaaa
atttgttttgtttgagCAAGAATGACATATGAAACTAAATCAATAGAAAG
ACAGAGGGGGGAGCATAATTTGATGTTATTTTAAAAACAGTTTGGGTGAT
TTGAGACAACTACTTGcgtttttgaagccttgagtTTTTATTCGTCCTTG
TTTGTGTCTGAGTCTCTGTATGTACGGTGTTTGTTGATGCTGTTTAAGAA
AAAATGAATCCTGAAGATAAAAGAAATTTAGCTCACAGTGCTGTCGGTAG
AAATCCGATGGTGGAAATGGATAGTGGAGAGATTGTGAAACTCaaagaag
aacatcaaaaagaaattcaaaaactgACCTATGAATCAAAGATAGAATTG
ATGGAATCACAAATGAAAACCATGCagctagaaaaagaaaatcaaacttt
atcTCATCAATTTGAGATGTTCAAATTAAAGAATTCTCGTGAATCTCAAT
CAAGTCAAGTTCAAGCCGATCAACAActccaaaaacaaaacatcgAGCTG
CAAAATAACTTGGTTGAAAAGGAGAAACAATTGCTAGCCAAAGAGCACGA
AATGGTTCTGTACaagaaagaacaagaaaatgaatggaaaatgaaaataa
aagacttggaaaatgaatggaaaatgaaaatgaaagatttagaaaatgaa
cacaaaattaaaatcttactAACGGAGACAAAATTGAACGAGAGGGAGAA
AGAAATAACAGAGAAAGAAGCAACTGTCCAACATTTGAAtagagaaattg
aaaatttgaaaagggtCATTCAAAAGCAAAACCAAGCTGCGGATAAAGTT
GAGGAAAATATGACGACGATCGATCGTTTGGTTTGGGGAGCAGAATATTT
TCACGAAGGAAACAAATCTTCACTTTTGTACCCTTCTTATGGTGACTGGT
ACAAAGCGATTTCCGGGATGATGGGAAATAAAAAAGTGTTCAAGAAGGAT
AAATATTTGTTCATGAGAAAGGAATTCAACCAGGGCTATGGTGTTCTGTG
TTTCGTGAACAGAAAAGACAACAGTTACAAAGAACATTTGGCGGAATTTC
TGgttgaagatttgaaaattgCATGGAAAACTGCAACTTTCTTTCTTCTC
CATACAAAGgattttggaaaatgtttaAAGTTTGGACGAATGAGTCAGAA
CGCTTCTTATGAATTTTGGCATGTTTATAATGTTTCAAcagatttttatt
ttggtgaTAAACAATCCGCAattgtttttggaattttaaagTGAATCAAA
TATACCAAAGATTGTAACGAATAAAACATTTTAATCAGAGAGTCTAGGCT
TTGATTGTTTTATCATTTGTAAGTTCATTTTTGAGAGCAGAATTTATTTA
ATCAGGTGGGATCAGtaccagctggcacaaaacgttgttttaacgtacAT
TTAACGCTTAATGGACGTTAGGGATGTCAGATCGACGTTATCATGACGTT
CTGTGCCAGCCAATTCATGACCCTTTTTAGTGACGTGTTTGTACATGGAA
CCCCAGCTTCACTCGGAAATTAACtttcatttcatccccatttaaaattc
aaaaaagaaaaaaattgcactccaaaaccattcccactggatttGAGAAC
CTGAGAACAATAGaacttctatccccattggtATTTCGATAGAAATCTTT
ATTCCCACTCTGGGAAGAGGTTCcctcggggctgtgagacaggggtgttt
tggtGTCATttggtactaaaataccaaaatggtTGTATAAAAAGGAAGAC
CTGAGAGTTCTTACTACATTTTATTACTAAAACtagcaattttatttttc
tttcattttttttaaataccacTTCTTAATAGTGGGTGCACTTTATACG Coding sequence (CDS) from alignment at sc0000142_pilon:276..5724+ >MSTRG.15731.1.p1 ID=MSTRG.15731.1.p1|Name=MSTRG.15731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000142_pilon:276..5724+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCCTggagatgaaaaaaatttagcGCACAGTGCTGTCGGTAGAAA
TGCAATGGTAGAAATGGATAGTGGAGAGATTgtgaaactgaaaaaagaac
atcaaaaagAGATTGAGAAACTCAAAATGGAATTTAAGATTCAACAACTG
GAATCTGAGAAcgagaaaactttgaaaatcatgcagttagaaaaagaaaa
tcaaactttatcTCATCAATTTGagattttcaaattaaagaattcttatt
atTCTCAATCAAGTCAAGCTCAAGCTGATCAACAACTCCAAAATAAGTTA
GTTGAAAAGGAGAAACAATTGGTAGCCAAAGAGCACGAAATGGTTCTGTA
Caagaaagaacaagaaaatgaatggaaaatgaaaataaaagatttggaaa
atgaatggaaaatgaaaatgaaagatttagaaaatgaatggaaaatgaaa
atgaaagatttagaaaatgaacacaaaatcaaaatcttacaaacggagac
aaaatTGAACGAGATGGAGAAAGAAATGACAGAGAAAGAAGCAACTGTCC
AACATTTAAAccgagaaattgaaaatttgaaaaggctTATTCCAAACGAA
AACCAAGCTGCGGAAAAAGTTGAGGAAAATATGACGACGATCGATCGTTT
GATTTGGGGAGCAGAATATTTTCACGAAGGAAATAAATCTTCACTTTTGT
ACCCTTCTTATGGTGACTGGTACAAAGCGATTTCCGCGATGATGGGAAAT
AAAAAAGTGTTCAAGAAGGATAAATATTTGTTCATGAGAAGGGAATTCAA
TAAGGCCTATGACTATCTGTATTTCGCGAACAGAAAAGACAACAGTTACG
AAGAACAGTTGAAGGATTTTATGGTTGAAGATTCGAAAATTGTATGGGAA
ACTGcaactttctttcttcttcataCAAAGgattttggaaaacatttaaA
GTTTGGACGAATGAGTCAGGAAGTTTCTTTTGAATATTGGCGCGTTGTTA
ATGTTTCAGGTTCTTATTTCGGTGCTAAACAATCTGCAATTGTTTTCGGA
ATTTTAAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000142_pilon | genome | sc0000142_pilon:276..5724 + |
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